CuGenDBv2

Gene ID	MS021922
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transmembrane protein
Genome location	scaffold110:198592..199143
RNA-Seq Expression	MS021922
Synteny	MS021922
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0051315.1 uncharacterized protein E6C27_scaffold55G00280 [Cucumis melo var. makuwa]

1.8e-74

80.95

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Query:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS
        MG+S     S S+ +SR+HYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFF+IFLHAFTIAGA+SG A+ASA TGRWFGVHMVF VLTAIFQGS
Subjt:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS

Query:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG-----KRSAKVQQYEESSWAAGPFPV
        V VLVFTRTGDFLGEL+SYVREEDG+VILKLGGGLS +IFCLEW+VLVLAF LKYYM VE  G     KRSAKVQQ+E+S+WAA PFPV
Subjt:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG-----KRSAKVQQYEESSWAAGPFPV

XP_008441816.1 PREDICTED: uncharacterized protein LOC103485869 [Cucumis melo]

2.4e-74

80.53

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Query:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS
        MG+S     S S+ +SR+HYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFF+IFLHAFTIAGA+SG A+ASA TGRWFGVHMVF VLTAIFQGS
Subjt:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS

Query:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG------KRSAKVQQYEESSWAAGPFPV
        V VLVFTRTGDFLGEL+SYVREEDG+VILKLGGGLS +IFCLEW+VLVLAF LKYYM VE  G      KRSAKVQQ+E+S+WAA PFPV
Subjt:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG------KRSAKVQQYEESSWAAGPFPV

XP_022144514.1 uncharacterized protein LOC111014182 [Momordica charantia]

2.7e-94

99.46

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Query:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS
        MGISTNFAASPSS ISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS
Subjt:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS

Query:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGGKRSAKVQQYEESSWAAGPFPV
        VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGGKRSAKVQQYEESSWAAGPFPV
Subjt:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGGKRSAKVQQYEESSWAAGPFPV

XP_022965972.1 uncharacterized protein LOC111465691 [Cucurbita maxima]

1.4e-74

80.75

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Query:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS
        MG+S    +SPS  ISR+HYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFF+IFLHAFTIAGA+SG A+ASA TGRWFGVHMVF VLTAIFQGS
Subjt:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS

Query:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG---KRSAKVQQYEESSWAAGPFPV
        VAVL+FTRT DFLGEL+SYVREEDG+VILKLGGGLS +IF LEW+VLVLAF LKYY  VE  G   KRSAKVQQ+E+S WAA PFPV
Subjt:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG---KRSAKVQQYEESSWAAGPFPV

XP_023537990.1 uncharacterized protein LOC111798872 [Cucurbita pepo subsp. pepo]

3.1e-74

80.21

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Query:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS
        MG+S    +SPS  ISR+HYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFF+IFLHAFTIAGA+SG A+A+A TGRWFGVHMVF VLTAIFQGS
Subjt:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS

Query:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG---KRSAKVQQYEESSWAAGPFPV
        VAVL+FTRT DFLGEL+SYVREEDG+VILKLGGGLS +IF LEW+VLVLAF LKYY  VE  G   KRSAKVQQ+E+S WAA PFPV
Subjt:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG---KRSAKVQQYEESSWAAGPFPV

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B526 uncharacterized protein LOC103485869

1.2e-74

80.53

Show/hide

Query:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS
        MG+S     S S+ +SR+HYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFF+IFLHAFTIAGA+SG A+ASA TGRWFGVHMVF VLTAIFQGS
Subjt:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS

Query:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG------KRSAKVQQYEESSWAAGPFPV
        V VLVFTRTGDFLGEL+SYVREEDG+VILKLGGGLS +IFCLEW+VLVLAF LKYYM VE  G      KRSAKVQQ+E+S+WAA PFPV
Subjt:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG------KRSAKVQQYEESSWAAGPFPV

A0A5A7UCF0 Uncharacterized protein

8.8e-75

80.95

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Query:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS
        MG+S     S S+ +SR+HYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFF+IFLHAFTIAGA+SG A+ASA TGRWFGVHMVF VLTAIFQGS
Subjt:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS

Query:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG-----KRSAKVQQYEESSWAAGPFPV
        V VLVFTRTGDFLGEL+SYVREEDG+VILKLGGGLS +IFCLEW+VLVLAF LKYYM VE  G     KRSAKVQQ+E+S+WAA PFPV
Subjt:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG-----KRSAKVQQYEESSWAAGPFPV

A0A5D3DJ66 Uncharacterized protein

1.2e-74

80.53

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Query:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS
        MG+S     S S+ +SR+HYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFF+IFLHAFTIAGA+SG A+ASA TGRWFGVHMVF VLTAIFQGS
Subjt:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS

Query:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG------KRSAKVQQYEESSWAAGPFPV
        V VLVFTRTGDFLGEL+SYVREEDG+VILKLGGGLS +IFCLEW+VLVLAF LKYYM VE  G      KRSAKVQQ+E+S+WAA PFPV
Subjt:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG------KRSAKVQQYEESSWAAGPFPV

A0A6J1CSI3 uncharacterized protein LOC111014182

1.3e-94

99.46

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Query:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS
        MGISTNFAASPSS ISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS
Subjt:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS

Query:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGGKRSAKVQQYEESSWAAGPFPV
        VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGGKRSAKVQQYEESSWAAGPFPV
Subjt:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGGKRSAKVQQYEESSWAAGPFPV

A0A6J1HLR5 uncharacterized protein LOC111465691

6.8e-75

80.75

Show/hide

Query:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS
        MG+S    +SPS  ISR+HYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFF+IFLHAFTIAGA+SG A+ASA TGRWFGVHMVF VLTAIFQGS
Subjt:  MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGS

Query:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG---KRSAKVQQYEESSWAAGPFPV
        VAVL+FTRT DFLGEL+SYVREEDG+VILKLGGGLS +IF LEW+VLVLAF LKYY  VE  G   KRSAKVQQ+E+S WAA PFPV
Subjt:  VAVLVFTRTGDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG---KRSAKVQQYEESSWAAGPFPV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G02640.1 unknown protein

4.2e-53

62.5

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Query:  PSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGSVAVLVFTRTG
        P   I  +HY  HKLFL  NY+LLGA+SSCIFLTLSLRL+PS+CGFFLI LHA TIA A+SG A AS G  RW+  HM+  VLTAIFQGSV+VL+FT T 
Subjt:  PSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGSVAVLVFTRTG

Query:  DFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG-----KRSAKVQQYE---ESSWA
        +FL  L SYVRE++ ++ILKL GGL  VIFCLEWIVLVLAF+LKYY  V+        KR+ KVQ  E    S WA
Subjt:  DFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG-----KRSAKVQQYE---ESSWA

AT5G16250.1 unknown protein

5.7e-58

65.92

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Query:  SPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGSVAVLVFTRT
        S SSP+  +HY+ HK+FL  NYILLGAASSCIFLTLSLRL+PS+CGF LI LHA TIA A+SG A AS G  RW+  HMV  VLTAIFQGSV+VL+FT T
Subjt:  SPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGSVAVLVFTRT

Query:  GDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG----KRSAKVQQYEESSWAAGPFPV
          FLG L+SYVREED AVILKLGGGL  VIFCL+WIVLV AF+LKYY  V+ G     KR+ KVQ  E       PF V
Subjt:  GDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGG----KRSAKVQQYEESSWAAGPFPV

AT5G36710.1 unknown protein

3.2e-45

58.19

Show/hide

Query:  ISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTG-----RWFGVHMVFAVLTAIFQGSVAVLVFTRT
        +S++  N H +FLLCNYILLG+ASSCIFLT+SLRL PS+ G  LIFL+  TIA A+SG ++ ++ T      R +G HMV  VLTAIFQG+V+VL+FTRT
Subjt:  ISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTG-----RWFGVHMVFAVLTAIFQGSVAVLVFTRT

Query:  GDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKY--YMQVEDGGKRSAKVQQYEE--SSWAAGPF
        GDFL  L+SYVREEDG VILKL GGL  ++FCLEWIVLVLAF LKY  Y+          KV++ EE    W + PF
Subjt:  GDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKY--YMQVEDGGKRSAKVQQYEE--SSWAAGPF

AT5G36800.1 unknown protein

3.2e-45

58.19

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Query:  ISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTG-----RWFGVHMVFAVLTAIFQGSVAVLVFTRT
        +S++  N H +FLLCNYILLG+ASSCIFLT+SLRL PS+ G  LIFL+  TIA A+SG ++ ++ T      R +G HMV  VLTAIFQG+V+VL+FTRT
Subjt:  ISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTG-----RWFGVHMVFAVLTAIFQGSVAVLVFTRT

Query:  GDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKY--YMQVEDGGKRSAKVQQYEE--SSWAAGPF
        GDFL  L+SYVREEDG VILKL GGL  ++FCLEWIVLVLAF LKY  Y+          KV++ EE    W + PF
Subjt:  GDFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKY--YMQVEDGGKRSAKVQQYEE--SSWAAGPF

Sequences

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CDS sequence

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ATGGGAATCTCGACGAATTTCGCGGCATCGCCATCGTCCCCGATTTCTAGAGCTCACTACAACATCCACAAACTGTTCCTCCTCTGCAACTACATCCTCCTCGGCGCCGC
CTCGAGCTGCATCTTCCTCACGCTGTCGCTCCGCCTCGTCCCCTCCGTGTGCGGCTTCTTCCTCATCTTCCTCCACGCCTTCACCATCGCGGGCGCCATCTCGGGCCTCG
CCCTCGCCTCGGCCGGCACCGGACGCTGGTTCGGAGTCCACATGGTGTTCGCCGTGCTCACCGCCATCTTCCAAGGCTCGGTCGCGGTGCTCGTCTTCACCCGAACCGGG
GATTTCCTGGGAGAATTGAGATCGTACGTGAGGGAGGAGGATGGGGCAGTGATTTTGAAACTTGGGGGCGGATTGAGCGCTGTGATCTTCTGCTTGGAGTGGATTGTTCT
TGTTCTTGCGTTTTGGTTGAAGTATTATATGCAAGTTGAAGATGGCGGGAAGAGGAGCGCCAAAGTTCAGCAGTATGAGGAATCGAGCTGGGCGGCTGGGCCATTCCCTG
TG

mRNA sequence

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Protein sequence

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MGISTNFAASPSSPISRAHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFLIFLHAFTIAGAISGLALASAGTGRWFGVHMVFAVLTAIFQGSVAVLVFTRTG
DFLGELRSYVREEDGAVILKLGGGLSAVIFCLEWIVLVLAFWLKYYMQVEDGGKRSAKVQQYEESSWAAGPFPV

MS021922 (gene) of Bitter gourd (TR) v1 genome