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MS021928 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021928
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionR2R3 MYB transcription factor
Genome locationscaffold110:233084..235208
RNA-Seq ExpressionMS021928
SyntenyMS021928
Gene Ontology termsNA
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138976.1 transcription factor MYB1-like [Cucumis sativus]1.4e-3182.5Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
        GLNRCRKSCRLRWLNYLRPNIKRGSFTP+EVDLI +LH++LGN        RWS+IAGRLPGRTANDIKNYWNCHLSKKL
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
XP_008441809.1 PREDICTED: transcription factor MYB90-like [Cucumis melo]8.3e-3283.75Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
        GLNRCRKSCRLRWLNYLRPNIKRGSFTP+EVDLI +LH+LLGN        RWS+IAGRLPGRTANDIKNYWNCHLSKKL
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
XP_010027133.2 transcription factor MYB1 [Eucalyptus grandis]4.1e-3183.75Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
        GLNRCRKSCRLRWLNYLRPNIKRGSFT EEVDLI  LHSLLGN        RWS+IAGRLPGRTAND+KNYWNCHLSKKL
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
XP_022144451.1 transcription factor WER-like [Momordica charantia]1.2e-3390Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
        GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGN        RWSVIAGRLPGRTANDIKNYWNCHLSKKL
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
XP_038891035.1 transcription factor MYB1-like [Benincasa hispida]3.2e-3181.25Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
        GLNRCRKSCRLRWLNYLRPNIKRGSFTP+EVDLI +LH++LGN        RWS+IAGRLPGRTANDIKNYWNCHLSK+L
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
TrEMBL top hitse value%identityAlignment
A0A059B607 Uncharacterized protein2.0e-3183.75Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
        GLNRCRKSCRLRWLNYLRPNIKRGSFT EEVDLI  LHSLLGN        RWS+IAGRLPGRTAND+KNYWNCHLSKKL
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
A0A1S3B4A4 transcription factor MYB90-like4.0e-3283.75Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
        GLNRCRKSCRLRWLNYLRPNIKRGSFTP+EVDLI +LH+LLGN        RWS+IAGRLPGRTANDIKNYWNCHLSKKL
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
A0A6J1CTG0 transcription factor WER-like5.6e-3490Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
        GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGN        RWSVIAGRLPGRTANDIKNYWNCHLSKKL
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
A0A6J1EYC9 transcription factor MYB1-like2.0e-3181.25Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
        GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEV+LI +LH++LGN        RWS+IAGRLPGRTANDIKNYWNCHLSKK+
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
A0A6J1KE93 transcription factor MYB1-like2.0e-3181.25Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
        GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEV+LI +LH++LGN        RWS+IAGRLPGRTANDIKNYWNCHLSKK+
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
SwissProt top hitse value%identityAlignment
A0A2R6S148 Transcription factor MYB16.2e-3073.75Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
        GLNRCRKSCR+RWLNYLRPNI RG+FT +EVDLI  LH LLGN        RWS+IAGRLPGRT+ND+KNYWN HL KKL
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
Q9FE25 Transcription factor MYB751.5e-2872.15Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKK
        GLNRCRKSCRLRWLNYL+P+IKRG  + +EVDL+  LH LLGN        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKK
Q9FNV8 Transcription factor MYB1142.4e-2973.42Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKK
        GLNRCRKSCRLRWLNYL+P+IKRG F+ +EVDL+  LH LLGN        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKK
Q9FNV9 Transcription factor MYB1131.5e-2872.15Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKK
        GLNRCRKSCRLRWLNYL+P+IKRG    +EVDL+  LH LLGN        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKK
Q9ZTC3 Transcription factor MYB902.0e-2872.15Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKK
        GLNRCRKSCRLRWLNYL+P+IKRG  + +EVDL+  LH LLGN        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKK
Arabidopsis top hitse value%identityAlignment
AT1G22640.1 myb domain protein 32.3e-2766.25Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
        GL RC KSCRLRW+NYLRP++KRG+FT EE +LI  LHSLLGN        +WS+IAGRLPGRT N+IKNYWN H+ +KL
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL
AT1G56650.1 production of anthocyanin pigment 11.1e-2972.15Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKK
        GLNRCRKSCRLRWLNYL+P+IKRG  + +EVDL+  LH LLGN        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKK
AT1G66370.1 myb domain protein 1131.1e-2972.15Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKK
        GLNRCRKSCRLRWLNYL+P+IKRG    +EVDL+  LH LLGN        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKK
AT1G66380.1 myb domain protein 1141.7e-3073.42Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKK
        GLNRCRKSCRLRWLNYL+P+IKRG F+ +EVDL+  LH LLGN        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKK
AT1G66390.1 myb domain protein 901.4e-2972.15Show/hide
Query:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKK
        GLNRCRKSCRLRWLNYL+P+IKRG  + +EVDL+  LH LLGN        RWS+IAGRLPGRTAND+KNYWN HLSKK
Subjt:  GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTTTAAACAGATGCAGAAAGAGTTGCAGACTGAGATGGTTGAATTATCTTCGTCCAAATATCAAAAGAGGAAGCTTCACACCAGAGGAAGTAGACCTCATTTTCAGCCT
CCACAGTCTCTTGGGCAACAGGCAAACATTTTTGGTGTGTACTAGGTGGTCAGTAATTGCAGGAAGATTACCAGGAAGAACAGCAAATGATATAAAGAACTATTGGAATT
GCCATTTGAGCAAGAAGCTG
mRNA sequenceShow/hide mRNA sequence
GGTTTAAACAGATGCAGAAAGAGTTGCAGACTGAGATGGTTGAATTATCTTCGTCCAAATATCAAAAGAGGAAGCTTCACACCAGAGGAAGTAGACCTCATTTTCAGCCT
CCACAGTCTCTTGGGCAACAGGCAAACATTTTTGGTGTGTACTAGGTGGTCAGTAATTGCAGGAAGATTACCAGGAAGAACAGCAAATGATATAAAGAACTATTGGAATT
GCCATTTGAGCAAGAAGCTG
Protein sequenceShow/hide protein sequence
GLNRCRKSCRLRWLNYLRPNIKRGSFTPEEVDLIFSLHSLLGNRQTFLVCTRWSVIAGRLPGRTANDIKNYWNCHLSKKL