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MS021929 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021929
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUbiquitin hydrolase B isoform X1
Genome locationscaffold110:258475..259311
RNA-Seq ExpressionMS021929
SyntenyMS021929
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021009.1 hypothetical protein SDJN02_17697 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-5571.08Show/hide
Query:  DYSCRNSGQIQI---QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHD
        DY  RNSGQI +   QIPAFGDWDKA+DLPITQYFE+ARQAGLI YSSSSGE+GPCLP+SDLY+VDRKKPPPS AA      K RV EKR+P  GLK+H 
Subjt:  DYSCRNSGQIQI---QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHD

Query:  DIGIPIPIKKQGKVFDVSEPGGARKAKQNDVSVSRPAPRSN-PRPPKPVDEDLYKIPPELLHSSKR
           +P+  ++QG+VFDV+E GGARK KQNDVS+ R  P+SN  +PPKPVDEDLYKIPPELLHSSKR
Subjt:  DIGIPIPIKKQGKVFDVSEPGGARKAKQNDVSVSRPAPRSN-PRPPKPVDEDLYKIPPELLHSSKR

KAG7029919.1 hypothetical protein SDJN02_08262, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-5673.91Show/hide
Query:  YSCRNSGQIQIQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDDIGI
        +S RNSGQ+  QIPAFGDWDKA D PITQYFESARQAGLIRYSSSSGESGPCLP SDLY+ D KKPPP   A   R  KGR+REKR+PHVGLKDH    I
Subjt:  YSCRNSGQIQIQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDDIGI

Query:  PIPIKKQGKVFDVSEPGGARKAKQNDVSVSRPAPRSNPRPPKPVDEDLYKIPPELLHSSKR
        P+ +K+QG+  +  E GGARK KQNDVS++RP PRSN RPPKPVDEDLYKIPP LLHSSKR
Subjt:  PIPIKKQGKVFDVSEPGGARKAKQNDVSVSRPAPRSNPRPPKPVDEDLYKIPPELLHSSKR

XP_011649025.1 uncharacterized protein LOC101218053 [Cucumis sativus]2.5e-5472.41Show/hide
Query:  YSCRNSGQIQI---QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDD
        YS RNSGQI +   QIPAFGDWDKAKDLPITQYFE+ARQAGLIRYSSSSGESGPC P SDLY+ DR KPPP     P    KGRVREKR+PHVGLK+H  
Subjt:  YSCRNSGQIQI---QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDD

Query:  IGIPIPIKKQ--------GKVFDVSEPGGARKAKQNDV-SVSRPAPRSN-PRPPKPVDEDLYKIPPELLHSSKR
            IPIKKQ        G+VFDV+E GGARK KQNDV S+SRP PRSN    PKPVDEDLYKIPPELLHSSKR
Subjt:  IGIPIPIKKQ--------GKVFDVSEPGGARKAKQNDV-SVSRPAPRSN-PRPPKPVDEDLYKIPPELLHSSKR

XP_022933161.1 uncharacterized protein LOC111440009 [Cucurbita moschata]2.2e-5573.29Show/hide
Query:  YSCRNSGQIQIQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDDIGI
        +S RNSGQ+  QIPAFGDWDKA D PITQYFESARQAGLIRYSSSSGESGPCLP SDLY+ D KKPPP   A   R  KGR+REKR+PHVGLKDH    I
Subjt:  YSCRNSGQIQIQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDDIGI

Query:  PIPIKKQGKVFDVSEPGGARKAKQNDVSVSRPAPRSNPRPPKPVDEDLYKIPPELLHSSKR
        P+ +K+QG+  +  E GGARK KQNDV + RP PRSN RPPKPVDEDLYKIPP LLHSSKR
Subjt:  PIPIKKQGKVFDVSEPGGARKAKQNDVSVSRPAPRSNPRPPKPVDEDLYKIPPELLHSSKR

XP_038889486.1 uncharacterized protein LOC120079394 [Benincasa hispida]3.7e-5875.45Show/hide
Query:  YSCRNSGQIQI---QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDD
        YS RNSGQI +   QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPC P SDLY+ DRKKPPP   A      KGRVREKR+PHVGLK+H++
Subjt:  YSCRNSGQIQI---QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDD

Query:  IGIPIPIK--KQGKVFDVSEPGGARKAKQNDVSVSRPAPRSN-PRPPKPVDEDLYKIPPELLHSSKR
          IPI  +  +QG+VFDV+E GGARK KQNDVSV  P  RSN  RPPKPVDEDLYKIPPELLHSSKR
Subjt:  IGIPIPIK--KQGKVFDVSEPGGARKAKQNDVSVSRPAPRSN-PRPPKPVDEDLYKIPPELLHSSKR

TrEMBL top hitse value%identityAlignment
A0A0A0LKP3 Uncharacterized protein1.2e-5472.41Show/hide
Query:  YSCRNSGQIQI---QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDD
        YS RNSGQI +   QIPAFGDWDKAKDLPITQYFE+ARQAGLIRYSSSSGESGPC P SDLY+ DR KPPP     P    KGRVREKR+PHVGLK+H  
Subjt:  YSCRNSGQIQI---QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDD

Query:  IGIPIPIKKQ--------GKVFDVSEPGGARKAKQNDV-SVSRPAPRSN-PRPPKPVDEDLYKIPPELLHSSKR
            IPIKKQ        G+VFDV+E GGARK KQNDV S+SRP PRSN    PKPVDEDLYKIPPELLHSSKR
Subjt:  IGIPIPIKKQ--------GKVFDVSEPGGARKAKQNDV-SVSRPAPRSN-PRPPKPVDEDLYKIPPELLHSSKR

A0A5D3DXR6 Uncharacterized protein1.7e-5371.26Show/hide
Query:  YSCRNSGQIQI---QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDD
        YS RNSGQI +   QIPAFGDWDKAKDLPITQYFE+ARQAGLIRYSSSSGESGPCLP SDLY+ DR KP P     P    KGRVREKR+PHVGLK+H  
Subjt:  YSCRNSGQIQI---QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDD

Query:  IGIPIPIKKQ--------GKVFDVSEPGGARKAKQNDV-SVSRPAPRSN-PRPPKPVDEDLYKIPPELLHSSKR
            IPIKKQ        G+VFDV+E GGARK KQND+ S+ RP PRSN    PKPVDEDLYKIPPELLHSSKR
Subjt:  IGIPIPIKKQ--------GKVFDVSEPGGARKAKQNDV-SVSRPAPRSN-PRPPKPVDEDLYKIPPELLHSSKR

A0A6J1EYC5 uncharacterized protein LOC1114400091.1e-5573.29Show/hide
Query:  YSCRNSGQIQIQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDDIGI
        +S RNSGQ+  QIPAFGDWDKA D PITQYFESARQAGLIRYSSSSGESGPCLP SDLY+ D KKPPP   A   R  KGR+REKR+PHVGLKDH    I
Subjt:  YSCRNSGQIQIQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDDIGI

Query:  PIPIKKQGKVFDVSEPGGARKAKQNDVSVSRPAPRSNPRPPKPVDEDLYKIPPELLHSSKR
        P+ +K+QG+  +  E GGARK KQNDV + RP PRSN RPPKPVDEDLYKIPP LLHSSKR
Subjt:  PIPIKKQGKVFDVSEPGGARKAKQNDVSVSRPAPRSNPRPPKPVDEDLYKIPPELLHSSKR

A0A6J1HN41 uncharacterized protein LOC1114656953.5e-5471.43Show/hide
Query:  DYSCRNSGQIQI---QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGL-KDH
        DY CRNSGQI +   QIPAFGDWDKA+DLPITQYFE+ARQAGLI YSSSSGE+GPCLP+SDLY+VDRKKPP S AA      K RV EKR+P VGL K+H
Subjt:  DYSCRNSGQIQI---QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGL-KDH

Query:  DDIGIPIPIKK-QGKVFDVSEPGGARKAKQNDVSVSRPAPRSN-PRPPKPVDEDLYKIPPELLHSSKR
               P+KK QG+VFDV+E GGARK KQNDVS+ R  P+SN  +PP+PVDEDLYKIPPELLHSSKR
Subjt:  DDIGIPIPIKK-QGKVFDVSEPGGARKAKQNDVSVSRPAPRSN-PRPPKPVDEDLYKIPPELLHSSKR

A0A6J1KBS3 uncharacterized protein LOC1114924462.0e-5472.67Show/hide
Query:  YSCRNSGQIQIQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDDIGI
        +S RNSGQ+  QIPAFGDWDKA D PITQYFESARQAGLIRYSSSSGESG CLP SDLY+ D KKPPP   A   R  KGR+REKR+PHVGLKDH    I
Subjt:  YSCRNSGQIQIQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDDIGI

Query:  PIPIKKQGKVFDVSEPGGARKAKQNDVSVSRPAPRSNPRPPKPVDEDLYKIPPELLHSSKR
        P+ +K+QG+  +  E GGARK KQNDV + RP PRSN RPPKPVDEDLYKIPP LLHSSKR
Subjt:  PIPIKKQGKVFDVSEPGGARKAKQNDVSVSRPAPRSNPRPPKPVDEDLYKIPPELLHSSKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18310.1 unknown protein8.6e-1334.67Show/hide
Query:  QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDDIGIPIPIKKQGKVF
        QIP FG+W++A ++PITQYFE+ RQA  ++ +S                     P P    A  ++     +EKR P   ++D       +  +      
Subjt:  QIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDDIGIPIPIKKQGKVF

Query:  DVSEPGGARKAKQNDVSVSRPAPRSNPRPPKPVDEDLYKIPPELLHSSKR
        DV+   G ++ K NDV+++        +PPKPVDEDLYKIPPE +HSS R
Subjt:  DVSEPGGARKAKQNDVSVSRPAPRSNPRPPKPVDEDLYKIPPELLHSSKR

AT5G18310.2 unknown protein5.7e-1738.82Show/hide
Query:  QIPAFGDWDKAKDLPITQYFESARQAGLIR--YSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDDIGIPIPIKKQGK
        QIP FG+W++A ++PITQYFE+ RQAGLIR  Y+++S  S     +S            S+++A   KL       RH H         G       Q +
Subjt:  QIPAFGDWDKAKDLPITQYFESARQAGLIR--YSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDDIGIPIPIKKQGK

Query:  VFDVSEPGGARKAKQNDVSVSRPAPRSNPRPPKPVDEDLYKIPPELLHSSKR
        V DVS          N V   +       +PPKPVDEDLYKIPPE +HSS R
Subjt:  VFDVSEPGGARKAKQNDVSVSRPAPRSNPRPPKPVDEDLYKIPPELLHSSKR

AT5G48500.1 unknown protein3.2e-0731.37Show/hide
Query:  IPAFGDWDKAKDLPITQYFESA--RQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLK-GRVREKRHPHVGLKDHDDIGIPIPIKKQGK
        +PAFG WD    +P TQ FE+A  +Q   + Y+S   +    L A DLY  +     P+    P R+ K G+   ++  +V  + H+        K + +
Subjt:  IPAFGDWDKAKDLPITQYFESA--RQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLK-GRVREKRHPHVGLKDHDDIGIPIPIKKQGK

Query:  VFDVSEPGGARKAKQNDVSVSRPAPRSNPRPPKPVDEDLYKIPPELLH-SSKR
         F+              VS   P  +   + PKPVDEDLYK+ P+LL   SKR
Subjt:  VFDVSEPGGARKAKQNDVSVSRPAPRSNPRPPKPVDEDLYKIPPELLH-SSKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTCTTTTTGCAGGATTATTCGTGCAGAAACAGCGGGCAAATCCAAATCCAAATCCCGGCGTTCGGCGACTGGGACAAGGCCAAGGACTTGCCGATCACTCAGTATTTCGA
AAGCGCTCGTCAGGCCGGTCTGATTCGCTACAGTTCCTCCTCCGGCGAAAGCGGCCCCTGCCTCCCCGCCTCCGATTTGTACACCGTTGATCGGAAGAAACCTCCGCCCT
CCACCGCCGCCGCTCCTCCGCGCAAGCTCAAGGGAAGGGTGAGGGAGAAGCGTCACCCGCATGTGGGTTTAAAGGATCATGATGATATTGGGATTCCCATTCCAATAAAG
AAGCAAGGGAAGGTGTTCGACGTGTCGGAACCGGGGGGAGCGCGGAAAGCGAAGCAGAACGACGTGTCGGTCTCGCGTCCTGCGCCCAGATCCAATCCCAGGCCACCTAA
ACCTGTGGATGAAGATCTCTACAAAATCCCACCGGAACTCCTCCACTCTTCTAAGCGG
mRNA sequenceShow/hide mRNA sequence
GTCTTTTTGCAGGATTATTCGTGCAGAAACAGCGGGCAAATCCAAATCCAAATCCCGGCGTTCGGCGACTGGGACAAGGCCAAGGACTTGCCGATCACTCAGTATTTCGA
AAGCGCTCGTCAGGCCGGTCTGATTCGCTACAGTTCCTCCTCCGGCGAAAGCGGCCCCTGCCTCCCCGCCTCCGATTTGTACACCGTTGATCGGAAGAAACCTCCGCCCT
CCACCGCCGCCGCTCCTCCGCGCAAGCTCAAGGGAAGGGTGAGGGAGAAGCGTCACCCGCATGTGGGTTTAAAGGATCATGATGATATTGGGATTCCCATTCCAATAAAG
AAGCAAGGGAAGGTGTTCGACGTGTCGGAACCGGGGGGAGCGCGGAAAGCGAAGCAGAACGACGTGTCGGTCTCGCGTCCTGCGCCCAGATCCAATCCCAGGCCACCTAA
ACCTGTGGATGAAGATCTCTACAAAATCCCACCGGAACTCCTCCACTCTTCTAAGCGG
Protein sequenceShow/hide protein sequence
VFLQDYSCRNSGQIQIQIPAFGDWDKAKDLPITQYFESARQAGLIRYSSSSGESGPCLPASDLYTVDRKKPPPSTAAAPPRKLKGRVREKRHPHVGLKDHDDIGIPIPIK
KQGKVFDVSEPGGARKAKQNDVSVSRPAPRSNPRPPKPVDEDLYKIPPELLHSSKR