; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021934 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021934
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor MYC4-like
Genome locationscaffold110:313907..314314
RNA-Seq ExpressionMS021934
SyntenyMS021934
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR045084 - Transcription factor AIB/MYC-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441948.1 PREDICTED: transcription factor MYC3-like [Cucumis melo]9.8e-1742.95Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPN------------EEEVTSKG-VEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVME
        F+SLR ++PNVS  D  A++L  AVSYIN+L  KI ++ES++              EEE +S+   E  + ++V+I+GGD+AV+RVE++ + YA A++ME
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPN------------EEEVTSKG-VEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVME

Query:  ALRDLELKLHHATISNLNNVTCQRLVVGLPSPQ-QTTQKGIQASLLKIL
        ALRDL LK+ H ++ N  ++T Q LVV +PS     + +GI+ +LL IL
Subjt:  ALRDLELKLHHATISNLNNVTCQRLVVGLPSPQ-QTTQKGIQASLLKIL

XP_022144464.1 transcription factor bHLH14-like [Momordica charantia]1.8e-2654.93Show/hide
Query:  FSSLRALLPNVSEADNA-AAVLFHAVSYINDLRTKIQQLESQLP-----NEEEVTS--KGVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDL
        FSSLR+LLPN S +DN+ AAVL  AVSYIN+L+ K++ LES L       E+E TS  K   +EV VEV+I+G D+AVVR++T+ + YA AR+MEALRDL
Subjt:  FSSLRALLPNVSEADNA-AAVLFHAVSYINDLRTKIQQLESQLP-----NEEEVTS--KGVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDL

Query:  ELKLHHATISNLNNVTCQRLVVGLPSPQQTTQKGIQASLLKI
        ELK+HHAT+ N N++T Q LV+GLP   +TT++     LLK+
Subjt:  ELKLHHATISNLNNVTCQRLVVGLPSPQQTTQKGIQASLLKI

XP_022144465.1 transcription factor MYC4-like [Momordica charantia]1.4e-58100Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHAT
        FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHAT
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHAT

Query:  ISNLNNVTCQRLVVGLPSPQQTTQKG
        ISNLNNVTCQRLVVGLPSPQQTTQKG
Subjt:  ISNLNNVTCQRLVVGLPSPQQTTQKG

XP_031736394.1 transcription factor bHLH14-like [Cucumis sativus]4.7e-1943.05Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGV---------------EVEVVVEVEIVGGDKAVVRVETQGVRYAEARV
        F+SLR+++PNVS  D  A++L  AVSYIN+L  KI ++ES++  E++    GV               E  + ++V+I+GGD+AV+RVE++ + YA A++
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGV---------------EVEVVVEVEIVGGDKAVVRVETQGVRYAEARV

Query:  MEALRDLELKLHHATISNLNNVTCQRLVVGLPSPQ-QTTQKGIQASLLKIL
        MEALRDLELK+ H ++ NL ++T Q LVV +PS    ++ +GI+ +LL IL
Subjt:  MEALRDLELKLHHATISNLNNVTCQRLVVGLPSPQ-QTTQKGIQASLLKIL

XP_038890552.1 transcription factor MYC3-like [Benincasa hispida]1.2e-1948.41Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQL-------PNEEEVTSKGVEVEVV-VEVEIVGGDKAVVRVETQGVRYAEARVMEALRDL
        F+SLR+++P+VS  D  A++L +A+SYIN+L+ KI ++ES++         EEE +S+    +V+ ++V+I+GGD+AV+RV+T+ V YA A++MEALRDL
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQL-------PNEEEVTSKGVEVEVV-VEVEIVGGDKAVVRVETQGVRYAEARVMEALRDL

Query:  ELKLHHATISNLNNVTCQRLVVGLPS
        ELK+ HA++SNL ++T Q LVV +PS
Subjt:  ELKLHHATISNLNNVTCQRLVVGLPS

TrEMBL top hitse value%identityAlignment
A0A0A0LKN8 BHLH domain-containing protein2.3e-1943.05Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGV---------------EVEVVVEVEIVGGDKAVVRVETQGVRYAEARV
        F+SLR+++PNVS  D  A++L  AVSYIN+L  KI ++ES++  E++    GV               E  + ++V+I+GGD+AV+RVE++ + YA A++
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGV---------------EVEVVVEVEIVGGDKAVVRVETQGVRYAEARV

Query:  MEALRDLELKLHHATISNLNNVTCQRLVVGLPSPQ-QTTQKGIQASLLKIL
        MEALRDLELK+ H ++ NL ++T Q LVV +PS    ++ +GI+ +LL IL
Subjt:  MEALRDLELKLHHATISNLNNVTCQRLVVGLPSPQ-QTTQKGIQASLLKIL

A0A1S3B4K7 transcription factor MYC3-like4.8e-1742.95Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPN------------EEEVTSKG-VEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVME
        F+SLR ++PNVS  D  A++L  AVSYIN+L  KI ++ES++              EEE +S+   E  + ++V+I+GGD+AV+RVE++ + YA A++ME
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPN------------EEEVTSKG-VEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVME

Query:  ALRDLELKLHHATISNLNNVTCQRLVVGLPSPQ-QTTQKGIQASLLKIL
        ALRDL LK+ H ++ N  ++T Q LVV +PS     + +GI+ +LL IL
Subjt:  ALRDLELKLHHATISNLNNVTCQRLVVGLPSPQ-QTTQKGIQASLLKIL

A0A5A7V6X0 Transcription factor MYC3-like4.8e-1742.95Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPN------------EEEVTSKG-VEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVME
        F+SLR ++PNVS  D  A++L  AVSYIN+L  KI ++ES++              EEE +S+   E  + ++V+I+GGD+AV+RVE++ + YA A++ME
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPN------------EEEVTSKG-VEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVME

Query:  ALRDLELKLHHATISNLNNVTCQRLVVGLPSPQ-QTTQKGIQASLLKIL
        ALRDL LK+ H ++ N  ++T Q LVV +PS     + +GI+ +LL IL
Subjt:  ALRDLELKLHHATISNLNNVTCQRLVVGLPSPQ-QTTQKGIQASLLKIL

A0A6J1CRP5 transcription factor MYC4-like6.6e-59100Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHAT
        FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHAT
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHAT

Query:  ISNLNNVTCQRLVVGLPSPQQTTQKG
        ISNLNNVTCQRLVVGLPSPQQTTQKG
Subjt:  ISNLNNVTCQRLVVGLPSPQQTTQKG

A0A6J1CSD3 transcription factor bHLH14-like8.7e-2754.93Show/hide
Query:  FSSLRALLPNVSEADNA-AAVLFHAVSYINDLRTKIQQLESQLP-----NEEEVTS--KGVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDL
        FSSLR+LLPN S +DN+ AAVL  AVSYIN+L+ K++ LES L       E+E TS  K   +EV VEV+I+G D+AVVR++T+ + YA AR+MEALRDL
Subjt:  FSSLRALLPNVSEADNA-AAVLFHAVSYINDLRTKIQQLESQLP-----NEEEVTS--KGVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDL

Query:  ELKLHHATISNLNNVTCQRLVVGLPSPQQTTQKGIQASLLKI
        ELK+HHAT+ N N++T Q LV+GLP   +TT++     LLK+
Subjt:  ELKLHHATISNLNNVTCQRLVVGLPSPQQTTQKGIQASLLKI

SwissProt top hitse value%identityAlignment
A0A060KY90 Transcription factor MYC16.4e-1133.57Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQ-------QLESQLP-NEEEVTSKGVE--------------VEVVVEVEIVGGDKAVVRVETQGV
        F +LRA++PNVS+ D  A++L  A++YIN+L++K+Q       +L SQ+    +E+T+KG                V++ ++V+++G D A++R++    
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQ-------QLESQLP-NEEEVTSKGVE--------------VEVVVEVEIVGGDKAVVRVETQGV

Query:  RYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPS
         +  AR+M AL+DL+L +HHA++S +N++  Q+  V + S
Subjt:  RYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPS

A0A3Q7HRZ6 Transcription factor MYC21.1e-1032.67Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQL----------------------PNEEEVTSK---GVEVEVVVEVEIVGGDKAVVRVET
        F +LRA++PNVS+ D  A++L  A+SYIN+L++K+Q  ES                        PN++   S    G  V+V ++V+I+G D A++R++ 
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQL----------------------PNEEEVTSK---GVEVEVVVEVEIVGGDKAVVRVET

Query:  QGVRYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPSPQQTTQK
            +  AR+M AL +L+L +HHA++S +N++  Q+  V + S   T ++
Subjt:  QGVRYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPSPQQTTQK

O49687 Transcription factor MYC42.4e-1032.68Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLES---QLPNEEEVTSK-------------------GVEVEVVVEVEIVGGDKAVVRVETQGV
        F SLRA++PNVS+ D  A++L  A+SYI++L++K+Q+ ES   +L  + +V +K                    V +E+ V+V+I+G D A++R++    
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLES---QLPNEEEVTSK-------------------GVEVEVVVEVEIVGGDKAVVRVETQGV

Query:  RYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPSPQQTTQKGIQASL
         +  A+ MEAL++L+L+++HA++S +N++  Q+  V + + Q  TQ  ++ +L
Subjt:  RYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPSPQQTTQKGIQASL

Q39204 Transcription factor MYC24.2e-1035.48Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLES---QLPNE-EEV-------------------TSKGVEVEVVVEVEIVGGDKAVVRVETQG
        F +LRA++PNVS+ D  A++L  A++YIN+L++K+ + ES   Q+ N+ EEV                    S    V + +EV+I+G D A++RVE+  
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLES---QLPNE-EEV-------------------TSKGVEVEVVVEVEIVGGDKAVVRVETQG

Query:  VRYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPSPQQTTQKGIQASLL
          +  AR+M AL DLEL+++HA++S +N++  Q+  V +   +  TQ+ ++ASL+
Subjt:  VRYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPSPQQTTQKGIQASLL

Q9FIP9 Transcription factor MYC37.1e-1032.65Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSK-----------------------------GVEVEVVVEVEIVGGDKAVV
        F SLRA++PNVS+ D  A++L  A+SYIN+L++K+QQ ES   ++EE+  K                                +E+ ++V+I+G D  ++
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSK-----------------------------GVEVEVVVEVEIVGGDKAVV

Query:  RVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPS
        RV+     +  AR MEAL++L+L+++HA++S +N++  Q+  V + S
Subjt:  RVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPS

Arabidopsis top hitse value%identityAlignment
AT1G32640.1 Basic helix-loop-helix (bHLH) DNA-binding family protein3.0e-1135.48Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLES---QLPNE-EEV-------------------TSKGVEVEVVVEVEIVGGDKAVVRVETQG
        F +LRA++PNVS+ D  A++L  A++YIN+L++K+ + ES   Q+ N+ EEV                    S    V + +EV+I+G D A++RVE+  
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLES---QLPNE-EEV-------------------TSKGVEVEVVVEVEIVGGDKAVVRVETQG

Query:  VRYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPSPQQTTQKGIQASLL
          +  AR+M AL DLEL+++HA++S +N++  Q+  V +   +  TQ+ ++ASL+
Subjt:  VRYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPSPQQTTQKGIQASLL

AT4G00870.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein7.3e-1031.87Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQ-----------LPNEEEVTS-KGVEVEV-------------VVEVEIVGGDKAVVRVET
        F +LRA++P VS  D  A++L  AVSYI  L++KI  LE++           L N    TS   VE +V              V+V+IV G++A++RV+T
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQ-----------LPNEEEVTS-KGVEVEV-------------VVEVEIVGGDKAVVRVET

Query:  QGVRYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPSPQQTTQKGIQASLLKIL
        + V +  + +M AL +++ ++ HA  S L+ V  Q +VV +P   ++  + ++ +L++ L
Subjt:  QGVRYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPSPQQTTQKGIQASLLKIL

AT4G17880.1 Basic helix-loop-helix (bHLH) DNA-binding family protein1.7e-1132.68Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLES---QLPNEEEVTSK-------------------GVEVEVVVEVEIVGGDKAVVRVETQGV
        F SLRA++PNVS+ D  A++L  A+SYI++L++K+Q+ ES   +L  + +V +K                    V +E+ V+V+I+G D A++R++    
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLES---QLPNEEEVTSK-------------------GVEVEVVVEVEIVGGDKAVVRVETQGV

Query:  RYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPSPQQTTQKGIQASL
         +  A+ MEAL++L+L+++HA++S +N++  Q+  V + + Q  TQ  ++ +L
Subjt:  RYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPSPQQTTQKGIQASL

AT5G46760.1 Basic helix-loop-helix (bHLH) DNA-binding family protein5.0e-1132.65Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSK-----------------------------GVEVEVVVEVEIVGGDKAVV
        F SLRA++PNVS+ D  A++L  A+SYIN+L++K+QQ ES   ++EE+  K                                +E+ ++V+I+G D  ++
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSK-----------------------------GVEVEVVVEVEIVGGDKAVV

Query:  RVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPS
        RV+     +  AR MEAL++L+L+++HA++S +N++  Q+  V + S
Subjt:  RVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQRLVVGLPS

AT5G46830.1 NACL-inducible gene 12.5e-1034.35Show/hide
Query:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLE--------------------SQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVRY
        F +LRA++PNVS+ D   ++L  AV YIN+L++K + +E                    + +P+  +   K  E+ + +EV+I+  D A+VRVE++   +
Subjt:  FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLE--------------------SQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVRY

Query:  AEARVMEALRDLELKLHHATISNLNNVTCQR
          AR+M AL DLEL+++HA+IS +N++  Q+
Subjt:  AEARVMEALRDLELKLHHATISNLNNVTCQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCAGCTCCCTCCGTGCCCTACTCCCAAACGTCTCCGAAGCGGACAATGCAGCTGCAGTTCTTTTCCACGCTGTCTCATACATCAACGACCTCCGAACGAAGATCCAGCA
ATTGGAGTCTCAACTTCCGAACGAGGAAGAAGTGACGTCCAAAGGAGTGGAAGTAGAAGTGGTGGTAGAAGTGGAGATCGTGGGAGGAGATAAGGCAGTTGTTAGAGTTG
AGACCCAGGGCGTGAGGTATGCAGAAGCTAGGGTCATGGAGGCCCTTAGGGACTTGGAGTTGAAGCTTCACCATGCCACAATCTCAAACTTGAACAATGTCACATGCCAA
CGTCTAGTCGTTGGCCTTCCTTCACCACAACAAACTACACAAAAAGGTATTCAAGCATCACTTCTCAAGATATTGCAC
mRNA sequenceShow/hide mRNA sequence
TTCAGCTCCCTCCGTGCCCTACTCCCAAACGTCTCCGAAGCGGACAATGCAGCTGCAGTTCTTTTCCACGCTGTCTCATACATCAACGACCTCCGAACGAAGATCCAGCA
ATTGGAGTCTCAACTTCCGAACGAGGAAGAAGTGACGTCCAAAGGAGTGGAAGTAGAAGTGGTGGTAGAAGTGGAGATCGTGGGAGGAGATAAGGCAGTTGTTAGAGTTG
AGACCCAGGGCGTGAGGTATGCAGAAGCTAGGGTCATGGAGGCCCTTAGGGACTTGGAGTTGAAGCTTCACCATGCCACAATCTCAAACTTGAACAATGTCACATGCCAA
CGTCTAGTCGTTGGCCTTCCTTCACCACAACAAACTACACAAAAAGGTATTCAAGCATCACTTCTCAAGATATTGCAC
Protein sequenceShow/hide protein sequence
FSSLRALLPNVSEADNAAAVLFHAVSYINDLRTKIQQLESQLPNEEEVTSKGVEVEVVVEVEIVGGDKAVVRVETQGVRYAEARVMEALRDLELKLHHATISNLNNVTCQ
RLVVGLPSPQQTTQKGIQASLLKILH