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MS021943 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021943
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold110:478563..478793
RNA-Seq ExpressionMS021943
SyntenyMS021943
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2685942.1 hypothetical protein I3760_10G150800 [Carya illinoinensis]6.4e-0563.49Show/hide
Query:  VTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRDGGGGGCGGGCG-GGGCGGCGGG
        V L SSSGL L+ ++++S+S+ISM+IFACGD +ND +  R GGGGG GGGCG GGG GGCG G
Subjt:  VTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRDGGGGGCGGGCG-GGGCGGCGGG

KAG6603228.1 hypothetical protein SDJN03_03837, partial [Cucurbita argyrosperma subsp. sororia]7.8e-1169.14Show/hide
Query:  MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRDGG--GGGCGGGCGG--GGCGGCGGG
        M R I A   GG GDVTL SS GL LL+ VLLS+SL+SMIIFACGDSS+D ++KR+GG  GGG GGGCGG  GG GGCGGG
Subjt:  MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRDGG--GGGCGGGCGG--GGCGGCGGG

KAG6603229.1 hypothetical protein SDJN03_03838, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1167.11Show/hide
Query:  MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRDGGGGGCGGGCGGGGCGGCGG
        M RPI A   GG GDVTL SS GL LL+ +L+S+SL+SMIIFACGDSS   ++KR+GGGG  G GCGGGGCGG GG
Subjt:  MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRDGGGGGCGGGCGGGGCGGCGG

KAG6604774.1 hypothetical protein SDJN03_02091, partial [Cucurbita argyrosperma subsp. sororia]3.9e-1072.15Show/hide
Query:  MARPIL--ADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRDGGGGGCGGGCGGGGCGGCGGG
        M RPIL  A   GGF DVTLVSS GLFLLS +LLSISL+SMIIFACG+S++    KR  GGGGCGGG GGGG GGCGGG
Subjt:  MARPIL--ADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRDGGGGGCGGGCGGGGCGGCGGG

KGN61189.1 hypothetical protein Csa_006542 [Cucumis sativus]2.2e-0557.69Show/hide
Query:  MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKK--RDGGGGGC---GGGCGGGGCGG
        M RPI A      GDVT     GL LLS++LLSISL+SMIIFAC +  N  +++   DGG GGC   GGGCGGGGCGG
Subjt:  MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKK--RDGGGGGC---GGGCGGGGCGG

TrEMBL top hitse value%identityAlignment
A0A0A0LJD5 Uncharacterized protein1.1e-0557.69Show/hide
Query:  MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKK--RDGGGGGC---GGGCGGGGCGG
        M RPI A      GDVT     GL LLS++LLSISL+SMIIFAC +  N  +++   DGG GGC   GGGCGGGGCGG
Subjt:  MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKK--RDGGGGGC---GGGCGGGGCGG

A0A200RAK0 Uncharacterized protein2.0e-0449.41Show/hide
Query:  MARPILADYHGGFGDVTLVSSSG--LFLLSIVLLSISLISMIIFACGDSSNDLQKK----RDGGGGGCGGGCG---GGGCGGCGG
        M R + +   GG GD+  +S+SG  L LL ++++S+S++SMIIF CG+  +   K      DGGGGG GGGCG   GGGCGGCGG
Subjt:  MARPILADYHGGFGDVTLVSSSG--LFLLSIVLLSISLISMIIFACGDSSNDLQKK----RDGGGGGCGGGCG---GGGCGGCGG

A0A498JL81 Uncharacterized protein3.4e-0451.81Show/hide
Query:  MARPILADYHGGFGDVTLV----SSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKK---RDGGGGGCGGGCGGGGCGGCGG
        MAR  +    G  G+V ++    +S GL LL ++L+S+SLISM+IFACGDSS   + +     GG GGCGGG GGGGCGG GG
Subjt:  MARPILADYHGGFGDVTLV----SSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKK---RDGGGGGCGGGCGGGGCGGCGG

A0A6J5WYX6 Uncharacterized protein2.0e-0459.38Show/hide
Query:  SSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRDGGGGGC------GGGCGGGGCGGCGGG
        +S G+FLL ++L+S+SLISM+IFACGD     +K+  GGGGG       GGGCGGGG GGCGGG
Subjt:  SSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRDGGGGGC------GGGCGGGGCGGCGGG

F6GYM8 Uncharacterized protein2.0e-0452.5Show/hide
Query:  MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSS---NDLQKKRDGGGGGCGGGCGGGGCGGCGGG
        MAR ++A   GG   +   SS  LFLL +V++S+S++SM+IFACG+SS   +  +++  GGGGG GGGCGGGG GG GGG
Subjt:  MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSS---NDLQKKRDGGGGGCGGGCGGGGCGGCGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGACCAATTCTAGCTGATTACCATGGAGGCTTTGGAGATGTCACCTTGGTTAGTTCTAGCGGATTATTTTTGCTTTCGATCGTCCTTCTATCGATCTCTCTCAT
ATCGATGATCATATTTGCTTGCGGTGACTCTAGTAACGATCTTCAAAAGAAAAGAGATGGTGGCGGTGGTGGCTGCGGCGGAGGTTGCGGTGGTGGAGGCTGTGGTGGCT
GCGGTGGTGGT
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGACCAATTCTAGCTGATTACCATGGAGGCTTTGGAGATGTCACCTTGGTTAGTTCTAGCGGATTATTTTTGCTTTCGATCGTCCTTCTATCGATCTCTCTCAT
ATCGATGATCATATTTGCTTGCGGTGACTCTAGTAACGATCTTCAAAAGAAAAGAGATGGTGGCGGTGGTGGCTGCGGCGGAGGTTGCGGTGGTGGAGGCTGTGGTGGCT
GCGGTGGTGGT
Protein sequenceShow/hide protein sequence
MARPILADYHGGFGDVTLVSSSGLFLLSIVLLSISLISMIIFACGDSSNDLQKKRDGGGGGCGGGCGGGGCGGCGGG