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MS021946 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021946
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP-dependent helicase ATRX
Genome locationscaffold110:502131..502325
RNA-Seq ExpressionMS021946
SyntenyMS021946
Gene Ontology termsGO:0000781 - chromosome, telomeric region (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040430.1 protein CHROMATIN REMODELING 20 isoform X3 [Cucumis melo var. makuwa]6.3e-1473.85Show/hide
Query:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLEASHISFSICIWEALVSLVALRCDSQ
        MEEK+E+V+DVGSASGDSFID+SEDDGPSTSG+D+QLHLEAS ISF ICI+  L  LVA    SQ
Subjt:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLEASHISFSICIWEALVSLVALRCDSQ
XP_008441780.1 PREDICTED: protein CHROMATIN REMODELING 20 isoform X1 [Cucumis melo]3.1e-0885Show/hide
Query:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLE
        MEEK+E+V+DVGSASGDSFID+SEDDGPSTSG+D+QLHLE
Subjt:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLE
XP_011649018.1 protein CHROMATIN REMODELING 20 isoform X2 [Cucumis sativus]3.1e-0885Show/hide
Query:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLE
        MEEK+E+V+DVGSASGDSFID+SEDDGPSTSG+D+QLHLE
Subjt:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLE
XP_022144469.1 protein CHROMATIN REMODELING 20-like [Momordica charantia]1.1e-10100Show/hide
Query:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLE
        MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLE
Subjt:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLE
XP_038889289.1 protein CHROMATIN REMODELING 20 [Benincasa hispida]3.1e-0885Show/hide
Query:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLE
        MEEK+E+V+DVGSASGDSFID+SEDDGPSTSG+D+QLHLE
Subjt:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLE
TrEMBL top hitse value%identityAlignment
A0A0A0LKL8 Uncharacterized protein6.8e-1476.27Show/hide
Query:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLEASHISFSICIWEALVSLVA
        MEEK+E+V+DVGSASGDSFID+SEDDGPSTSG+D+QLHLEAS IS  ICI++ L  LVA
Subjt:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLEASHISFSICIWEALVSLVA
A0A1S3B484 ATP-dependent helicase ATRX1.5e-0885Show/hide
Query:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLE
        MEEK+E+V+DVGSASGDSFID+SEDDGPSTSG+D+QLHLE
Subjt:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLE
A0A1S3B4Z9 ATP-dependent helicase ATRX1.5e-0885Show/hide
Query:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLE
        MEEK+E+V+DVGSASGDSFID+SEDDGPSTSG+D+QLHLE
Subjt:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLE
A0A5D3BJY9 Protein CHROMATIN REMODELING 20 isoform X33.1e-1473.85Show/hide
Query:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLEASHISFSICIWEALVSLVALRCDSQ
        MEEK+E+V+DVGSASGDSFID+SEDDGPSTSG+D+QLHLEAS ISF ICI+  L  LVA    SQ
Subjt:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLEASHISFSICIWEALVSLVALRCDSQ
A0A6J1CSD7 protein CHROMATIN REMODELING 20-like5.4e-11100Show/hide
Query:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLE
        MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLE
Subjt:  MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAAAGAACGAGGAAGTGGAAGATGTAGGGAGTGCGTCTGGCGATTCTTTTATCGATGAATCAGAAGATGATGGGCCATCAACATCTGGTCAGGACGAGCAATT
GCATCTCGAGGCAAGCCACATTAGCTTTTCAATTTGTATTTGGGAAGCTTTGGTTTCACTTGTTGCTTTACGTTGTGATAGTCAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAAAGAACGAGGAAGTGGAAGATGTAGGGAGTGCGTCTGGCGATTCTTTTATCGATGAATCAGAAGATGATGGGCCATCAACATCTGGTCAGGACGAGCAATT
GCATCTCGAGGCAAGCCACATTAGCTTTTCAATTTGTATTTGGGAAGCTTTGGTTTCACTTGTTGCTTTACGTTGTGATAGTCAG
Protein sequenceShow/hide protein sequence
MEEKNEEVEDVGSASGDSFIDESEDDGPSTSGQDEQLHLEASHISFSICIWEALVSLVALRCDSQ