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MS021958 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021958
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibosomal protein S7
Genome locationscaffold110:568178..568381
RNA-Seq ExpressionMS021958
SyntenyMS021958
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEN56109.1 ribosomal protein S7 [Cucumis melo subsp. melo]3.6e-2082.43Show/hide
Query:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
        VPGIV RDRQQTLAI  ILEAAFKRRISYRI    CSFAEILDA  +RGIA K RENLHRLASTNRSFAHFRW+
Subjt:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
BBN69458.1 Tudor/PWWP/MBT superfamily protein [Prunus dulcis]3.6e-2082.43Show/hide
Query:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
        VPGIV RDRQQTLAI  ILEAAFKRRISYRI    CSFAEILDA  +RGIA K RENLHRLASTNRSFAHFRW+
Subjt:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
CAB4277236.1 unnamed protein product [Prunus armeniaca]3.6e-2082.43Show/hide
Query:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
        VPGIV RDRQQTLAI  ILEAAFKRRISYRI    CSFAEILDA  +RGIA K RENLHRLASTNRSFAHFRW+
Subjt:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
KAF3452152.1 hypothetical protein FNV43_RR08250 [Rhamnella rubrinervis]3.6e-2082.43Show/hide
Query:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
        VPGIV RDRQQTLAI  ILEAAFKRRISYRI    CSFAEILDA  +RGIA K RENLHRLASTNRSFAHFRW+
Subjt:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
YP_009241662.1 ribosomal protein S7 [Ziziphus jujuba]3.6e-2082.43Show/hide
Query:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
        VPGIV RDRQQTLAI  ILEAAFKRRISYRI    CSFAEILDA  +RGIA K RENLHRLASTNRSFAHFRW+
Subjt:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
TrEMBL top hitse value%identityAlignment
A0A142BZ01 Ribosomal protein S71.7e-2082.43Show/hide
Query:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
        VPGIV RDRQQTLAI  ILEAAFKRRISYRI    CSFAEILDA  +RGIA K RENLHRLASTNRSFAHFRW+
Subjt:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
A0A5D3DUQ4 Ribosomal protein S7 (Mitochondrion)1.7e-2082.43Show/hide
Query:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
        VPGIV RDRQQTLAI  ILEAAFKRRISYRI    CSFAEILDA  +RGIA K RENLHRLASTNRSFAHFRW+
Subjt:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
A0A6J5XA11 Ribosomal_S7 domain-containing protein1.7e-2082.43Show/hide
Query:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
        VPGIV RDRQQTLAI  ILEAAFKRRISYRI    CSFAEILDA  +RGIA K RENLHRLASTNRSFAHFRW+
Subjt:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
A0A7D6C7C9 Ribosomal protein S71.7e-2082.43Show/hide
Query:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
        VPGIV RDRQQTLAI  ILEAAFKRRISYRI    CSFAEILDA  +RGIA K RENLHRLASTNRSFAHFRW+
Subjt:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
G3EU25 Ribosomal protein S71.7e-2082.43Show/hide
Query:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
        VPGIV RDRQQTLAI  ILEAAFKRRISYRI    CSFAEILDA  +RGIA K RENLHRLASTNRSFAHFRW+
Subjt:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
SwissProt top hitse value%identityAlignment
A7IFX7 30S ribosomal protein S74.0e-0645.71Show/hide
Query:  VPGIVVRDRQQTLAIHILEAAFKRRISYRICS--FAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRW
        VP  V  +R+QTLAI  L A+ + R    +     AE+LDA   RG A K RE+ HR+A  NR+F+H+RW
Subjt:  VPGIVVRDRQQTLAIHILEAAFKRRISYRICS--FAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRW
P26867 Ribosomal protein S7, mitochondrial3.2e-1152Show/hide
Query:  VPGIVVRDRQQTLAIH-ILEAAFKRR-----ISYRICSFAEILDAQR--GIAHKNRENLHRLASTNRSFAHFRWY
        VP I+  +RQ+TLAI  +LE+A KRR     IS   C +AEIL+A +  GIA K R++LH+LA  NRSF+H+RW+
Subjt:  VPGIVVRDRQQTLAIH-ILEAAFKRR-----ISYRICSFAEILDAQR--GIAHKNRENLHRLASTNRSFAHFRWY
P92557 Ribosomal protein S7, mitochondrial3.4e-2178.38Show/hide
Query:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
        VPGIV RDRQQTLAI  ILEAAFKRRISYRI    CSFAEILDA  +RG A + RENLH LASTNRSFAHFRW+
Subjt:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
Q01902 Ribosomal protein S7, mitochondrial4.4e-2178.38Show/hide
Query:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
        VPGIV RDRQQTLAI  IL AAFKRRISYRI    CSFAEILDA  +RGI+ K RENLH LASTNRSFAHFRW+
Subjt:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
Q9MF82 Ribosomal protein S7, mitochondrial6.3e-2075.68Show/hide
Query:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
        VPGIV RDRQQTLAI  ILEAAFKRRISYRI    C F EILDA  +RGI+ K RENLH LAS NRSFAHFRW+
Subjt:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
Arabidopsis top hitse value%identityAlignment
AT2G07696.1 Ribosomal protein S7p/S5e family protein2.4e-2278.38Show/hide
Query:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
        VPGIV RDRQQTLAI  ILEAAFKRRISYRI    CSFAEILDA  +RG A + RENLH LASTNRSFAHFRW+
Subjt:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
ATMG01270.1 mitochondrial ribosomal protein S72.4e-2278.38Show/hide
Query:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY
        VPGIV RDRQQTLAI  ILEAAFKRRISYRI    CSFAEILDA  +RG A + RENLH LASTNRSFAHFRW+
Subjt:  VPGIVVRDRQQTLAIH-ILEAAFKRRISYRI----CSFAEILDA--QRGIAHKNRENLHRLASTNRSFAHFRWY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTCCCTGGGATTGTAGTCCGGGATCGTCAACAAACCTTAGCTATTCATATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATATGTTCATTTGCTGAGATACT
GGATGCTCAGAGGGGAATTGCACATAAGAATAGGGAGAATCTTCATAGACTCGCTTCCACCAATCGAAGTTTCGCACATTTCAGATGGTAC
mRNA sequenceShow/hide mRNA sequence
GTCCCTGGGATTGTAGTCCGGGATCGTCAACAAACCTTAGCTATTCATATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATATGTTCATTTGCTGAGATACT
GGATGCTCAGAGGGGAATTGCACATAAGAATAGGGAGAATCTTCATAGACTCGCTTCCACCAATCGAAGTTTCGCACATTTCAGATGGTAC
Protein sequenceShow/hide protein sequence
VPGIVVRDRQQTLAIHILEAAFKRRISYRICSFAEILDAQRGIAHKNRENLHRLASTNRSFAHFRWY