; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021961 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021961
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRNA helicase
Genome locationscaffold110:593695..593825
RNA-Seq ExpressionMS021961
SyntenyMS021961
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:0140657 - ATP-dependent activity (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135864.1 DEAD-box ATP-dependent RNA helicase 35 [Cucumis sativus]6.1e-0560.34Show/hide
Query:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
        MDV+MKDEK++EEED+YVEY            +I + KGKASA   ELEKSRLAEAKP
Subjt:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
XP_008461142.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Cucumis melo]2.1e-0562.07Show/hide
Query:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
        MDV+MKDEK++EEEDDYVEY            +I + KGKASA   ELEKSRLAEAKP
Subjt:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
XP_022148436.1 DEAD-box ATP-dependent RNA helicase 35 [Momordica charantia]2.1e-0562.07Show/hide
Query:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
        MDV+MKDEKN+EEED+YVEY            +I + KGKASA   ELEKSRLAEAKP
Subjt:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
XP_023004285.1 DEAD-box ATP-dependent RNA helicase 35 [Cucurbita maxima]7.9e-0562.07Show/hide
Query:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
        MDV MKDEK+MEEE+DYVEY            +I + KGKASA   ELEKSRLAEAKP
Subjt:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
XP_038885065.1 DEAD-box ATP-dependent RNA helicase 35 [Benincasa hispida]2.5e-0663.79Show/hide
Query:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
        MDV+MKDEK++EEEDDYVEY            +I +HKGKASA   ELEKSRLAEAKP
Subjt:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
TrEMBL top hitse value%identityAlignment
A0A0A0K6A2 RNA helicase2.9e-0560.34Show/hide
Query:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
        MDV+MKDEK++EEED+YVEY            +I + KGKASA   ELEKSRLAEAKP
Subjt:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
A0A1S3CDK5 RNA helicase1.0e-0562.07Show/hide
Query:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
        MDV+MKDEK++EEEDDYVEY            +I + KGKASA   ELEKSRLAEAKP
Subjt:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
A0A5A7UYT9 RNA helicase1.0e-0562.07Show/hide
Query:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
        MDV+MKDEK++EEEDDYVEY            +I + KGKASA   ELEKSRLAEAKP
Subjt:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
A0A6J1D5D5 RNA helicase1.0e-0562.07Show/hide
Query:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
        MDV+MKDEKN+EEED+YVEY            +I + KGKASA   ELEKSRLAEAKP
Subjt:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
A0A6J1KU58 RNA helicase3.8e-0562.07Show/hide
Query:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
        MDV MKDEK+MEEE+DYVEY            +I + KGKASA   ELEKSRLAEAKP
Subjt:  MDVRMKDEKNMEEEDDYVEY------------QIFLHKGKASA---ELEKSRLAEAKP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTACGAATGAAGGACGAAAAGAACATGGAAGAGGAAGATGACTATGTTGAATATCAAATTTTCCTGCACAAGGGAAAGGCTTCTGCCGAGTTGGAGAAATCAAG
GCTTGCTGAAGCCAAGCCC
mRNA sequenceShow/hide mRNA sequence
ATGGATGTACGAATGAAGGACGAAAAGAACATGGAAGAGGAAGATGACTATGTTGAATATCAAATTTTCCTGCACAAGGGAAAGGCTTCTGCCGAGTTGGAGAAATCAAG
GCTTGCTGAAGCCAAGCCC
Protein sequenceShow/hide protein sequence
MDVRMKDEKNMEEEDDYVEYQIFLHKGKASAELEKSRLAEAKP