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MS021970 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021970
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein Ycf2
Genome locationscaffold110:683110..683211
RNA-Seq ExpressionMS021970
SyntenyMS021970
Gene Ontology termsGO:0009570 - chloroplast stroma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QIT04093.1 Ycf2 protein [Luffa aegyptiaca]5.9e-11100Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
QJR53001.1 hypothetical protein RF2 [Herpetospermum pedunculosum]5.9e-11100Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
YP_009752033.1 Ycf2 protein [Cionosicys macranthus]5.9e-11100Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
YP_009752370.1 Ycf2 protein [Bryonia marmorata]5.9e-11100Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
YP_010131137.1 hypothetical protein RF2 [Benincasa hispida]5.9e-11100Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
TrEMBL top hitse value%identityAlignment
A0A343F2F1 Protein Ycf22.8e-11100Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
A0A6H0ESM3 Protein Ycf22.8e-11100Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
A0A6H0ET42 Protein Ycf22.8e-11100Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
A0A6H0EV63 Protein Ycf22.8e-11100Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
A0A6M3RUH1 Protein Ycf22.8e-11100Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
SwissProt top hitse value%identityAlignment
A0A379 Protein Ycf22.2e-1397.06Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SV QDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
A7Y3J6 Protein Ycf22.2e-1397.06Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SV QDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
A8W3G3 Protein Ycf22.2e-1397.06Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SV QDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
P32033 Protein Ycf22.2e-1397.06Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SV QDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Q0ZIV6 Protein Ycf22.2e-1397.06Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SV QDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
Arabidopsis top hitse value%identityAlignment
ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core4.3e-1288.24Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SV QDLWSLP PDEKN ITSYG VENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core4.3e-1288.24Show/hide
Query:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL
        SV QDLWSLP PDEKN ITSYG VENDSDLVHGL
Subjt:  SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAGTCGTTCAAGACCTTTGGTCTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTA
mRNA sequenceShow/hide mRNA sequence
TCAGTCGTTCAAGACCTTTGGTCTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTA
Protein sequenceShow/hide protein sequence
SVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL