; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021977 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021977
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionIsopentenyl-diphosphate Delta-isomerase
Genome locationscaffold110:771785..776108
RNA-Seq ExpressionMS021977
SyntenyMS021977
Gene Ontology termsGO:0009240 - isopentenyl diphosphate biosynthetic process (biological process)
GO:0015995 - chlorophyll biosynthetic process (biological process)
GO:0050992 - dimethylallyl diphosphate biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity (molecular function)
InterPro domainsIPR000086 - NUDIX hydrolase domain
IPR011876 - Isopentenyl-diphosphate delta-isomerase, type 1
IPR015797 - NUDIX hydrolase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152825.1 isopentenyl-diphosphate Delta-isomerase I [Cucumis sativus]2.1e-14186.67Show/hide
Query:  TLSSHLLKTTLSLSLSSSINFSSKCRFSSA-FAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN
        +LS +LLK TLSLSLS SI+F+SKC FSS+ F+PRP+ +R+SRC LSTKTA+GSAPD+AMDAVQRRLMFDDECILVDE DNIVGHDSKYNCHLMDNIE N
Subjt:  TLSSHLLKTTLSLSLSSSINFSSKCRFSSA-FAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN

Query:  KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEH
        KALHRAFSVFLFN++FELLLQQRS TKVTFPLVWTNTCCSHPLYRESELIE+++LGVRNAAQRKLFDELGI AEDVPVDQF SIGRILYKAPSDGRWGEH
Subjt:  KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEH

Query:  ELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT
        ELDYLLF+VRNVNVNPNP+EVADI+YVNQEQLKEL+RKADAGEDG+KLSPWF+LVVNNFLFKWWDHLEKG++ E+VDMKTIHKLT
Subjt:  ELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT

XP_008441849.1 PREDICTED: isopentenyl-diphosphate Delta-isomerase I-like [Cucumis melo]7.8e-14186.67Show/hide
Query:  TLSSHLLKTTLSLSLSSSINFSSKCRFSSA-FAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN
        +LS +LLK TLSLSLS SI+FSSKC FSS+ F+PRP+ +R+SR  LSTKTA+GSAPD+AMDAVQRRLMFDDECILVDE+DNIVGHDSKYNCHLMDNIE N
Subjt:  TLSSHLLKTTLSLSLSSSINFSSKCRFSSA-FAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN

Query:  KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEH
        KALHRAFSVFLFN++FELLLQQRS TKVTFPLVWTNTCCSHPLYRESELIE+++LGVRNAAQRKLFDELGI AEDVPVDQF SIGRILYKAPSDGRWGEH
Subjt:  KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEH

Query:  ELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT
        ELDYLLF+VRNVNVNPNP EVAD++YVNQEQLKEL+RKADAGEDG+KLSPWF+LVVNNFLFKWWDHLEKGT+ E+VDMKTIHKLT
Subjt:  ELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT

XP_022149936.1 isopentenyl-diphosphate Delta-isomerase I-like [Momordica charantia]3.2e-15898.25Show/hide
Query:  PTLSSHLLKTTLSLSLSSSINFSSKCRFSSAFAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN
        PTLSSHLLKTTLSLSLSSSINFSSKCRFSS FAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN
Subjt:  PTLSSHLLKTTLSLSLSSSINFSSKCRFSSAFAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN

Query:  KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEH
        KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAED PVDQFISIGRILYKAPSDGRWGEH
Subjt:  KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEH

Query:  ELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT
        ELDYLLFVVRN+NVN NP+EVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT
Subjt:  ELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT

XP_022996956.1 isopentenyl-diphosphate Delta-isomerase I-like [Cucurbita maxima]3.4e-13685.56Show/hide
Query:  LSSHLLKTTLSLSLSSSINFSSKCRFSSAFAP-RPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESNK
        ++SHLLKT   LS    I+FSSKCRF+S+ +P RPL AR+SRC LST T + SA D++MDAVQRRLMFDDECILVDE+DNIVGHDSKYNCHLMDNIESNK
Subjt:  LSSHLLKTTLSLSLSSSINFSSKCRFSSAFAP-RPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESNK

Query:  ALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEHE
        ALHRAFSVFLFN++FELLLQQRS TKVTFPLVWTNTCCSHPLYRESELIEED+LGVRNAAQRKLFDELGIAAEDVPVDQF SIGRILYKAPSDG+WGEHE
Subjt:  ALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEHE

Query:  LDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT
        LDYLLFVVRNV+VNPNP+EVADIKYVNQEQLKEL+RKADAGE G+KLSPWFRLVVN+FL+KWWDHL+KGTL EVVDMKTIHKLT
Subjt:  LDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT

XP_038890682.1 isopentenyl-diphosphate Delta-isomerase I-like [Benincasa hispida]2.2e-14388.42Show/hide
Query:  TLSSHLLKTTLSLSLSSSINFSSKCRFSSA-FAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN
        +LSS+LLK TLSLSLS SI+FSSKCRFSS+ F PRP  +R+SRC  STKTA+GSAPD+AMDAVQRRLMFDDECILVDE+DNIVGHDSKYNCHLMDNIESN
Subjt:  TLSSHLLKTTLSLSLSSSINFSSKCRFSSA-FAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN

Query:  KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEH
        KALHRAFSVFLFN++FELLLQQRS TKVTFPLVWTNTCCSHPLYRESELIEED+LGVRNAAQRKL DELGI AEDVPVDQFISIGRILYKAPSDGRWGEH
Subjt:  KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEH

Query:  ELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT
        ELDYLLF+V+NV+VNPNP+EVADIKYVNQEQLKEL+RKADAGEDG+KLSPWF+LVVNNFLFKWWDHLEKGTL E++DMKTIHKLT
Subjt:  ELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT

TrEMBL top hitse value%identityAlignment
A0A0A0LHK1 Isopentenyl-diphosphate Delta-isomerase9.9e-14286.67Show/hide
Query:  TLSSHLLKTTLSLSLSSSINFSSKCRFSSA-FAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN
        +LS +LLK TLSLSLS SI+F+SKC FSS+ F+PRP+ +R+SRC LSTKTA+GSAPD+AMDAVQRRLMFDDECILVDE DNIVGHDSKYNCHLMDNIE N
Subjt:  TLSSHLLKTTLSLSLSSSINFSSKCRFSSA-FAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN

Query:  KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEH
        KALHRAFSVFLFN++FELLLQQRS TKVTFPLVWTNTCCSHPLYRESELIE+++LGVRNAAQRKLFDELGI AEDVPVDQF SIGRILYKAPSDGRWGEH
Subjt:  KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEH

Query:  ELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT
        ELDYLLF+VRNVNVNPNP+EVADI+YVNQEQLKEL+RKADAGEDG+KLSPWF+LVVNNFLFKWWDHLEKG++ E+VDMKTIHKLT
Subjt:  ELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT

A0A1S3B4E2 Isopentenyl-diphosphate Delta-isomerase3.8e-14186.67Show/hide
Query:  TLSSHLLKTTLSLSLSSSINFSSKCRFSSA-FAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN
        +LS +LLK TLSLSLS SI+FSSKC FSS+ F+PRP+ +R+SR  LSTKTA+GSAPD+AMDAVQRRLMFDDECILVDE+DNIVGHDSKYNCHLMDNIE N
Subjt:  TLSSHLLKTTLSLSLSSSINFSSKCRFSSA-FAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN

Query:  KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEH
        KALHRAFSVFLFN++FELLLQQRS TKVTFPLVWTNTCCSHPLYRESELIE+++LGVRNAAQRKLFDELGI AEDVPVDQF SIGRILYKAPSDGRWGEH
Subjt:  KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEH

Query:  ELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT
        ELDYLLF+VRNVNVNPNP EVAD++YVNQEQLKEL+RKADAGEDG+KLSPWF+LVVNNFLFKWWDHLEKGT+ E+VDMKTIHKLT
Subjt:  ELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT

A0A6J1D9X9 Isopentenyl-diphosphate Delta-isomerase1.5e-15898.25Show/hide
Query:  PTLSSHLLKTTLSLSLSSSINFSSKCRFSSAFAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN
        PTLSSHLLKTTLSLSLSSSINFSSKCRFSS FAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN
Subjt:  PTLSSHLLKTTLSLSLSSSINFSSKCRFSSAFAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN

Query:  KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEH
        KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAED PVDQFISIGRILYKAPSDGRWGEH
Subjt:  KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEH

Query:  ELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT
        ELDYLLFVVRN+NVN NP+EVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT
Subjt:  ELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT

A0A6J1ENL1 Isopentenyl-diphosphate Delta-isomerase1.4e-13585.92Show/hide
Query:  LSSHLLKTTLSLSLSSSINFSSKCRF-SSAFAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESNK
        ++SHLLKT   LS    I+FSSKCRF SS  APR L AR+SRC LST T + SA D++MDAVQRRLMFDDECILVDE+DNIVGHDSKYNCHLMDNIESNK
Subjt:  LSSHLLKTTLSLSLSSSINFSSKCRF-SSAFAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESNK

Query:  ALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEHE
        ALHRAFSVFLFN++FELLLQQRS TKVTFPLVWTNTCCSHPLYRESELIEED+LGVRNAAQRKLFDELGIAAEDVPVDQF SIGRILYKAPSDG+WGEHE
Subjt:  ALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEHE

Query:  LDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT
        LDYLLFVVRNV+VNPNP+EVADIKYVNQEQLKEL+RKADAGE G+KLSPWFRLVVN+FL+KWWDHL KGTL EVVDMKTIHKLT
Subjt:  LDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT

A0A6J1K659 Isopentenyl-diphosphate Delta-isomerase1.6e-13685.56Show/hide
Query:  LSSHLLKTTLSLSLSSSINFSSKCRFSSAFAP-RPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESNK
        ++SHLLKT   LS    I+FSSKCRF+S+ +P RPL AR+SRC LST T + SA D++MDAVQRRLMFDDECILVDE+DNIVGHDSKYNCHLMDNIESNK
Subjt:  LSSHLLKTTLSLSLSSSINFSSKCRFSSAFAP-RPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESNK

Query:  ALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEHE
        ALHRAFSVFLFN++FELLLQQRS TKVTFPLVWTNTCCSHPLYRESELIEED+LGVRNAAQRKLFDELGIAAEDVPVDQF SIGRILYKAPSDG+WGEHE
Subjt:  ALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEHE

Query:  LDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT
        LDYLLFVVRNV+VNPNP+EVADIKYVNQEQLKEL+RKADAGE G+KLSPWFRLVVN+FL+KWWDHL+KGTL EVVDMKTIHKLT
Subjt:  LDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT

SwissProt top hitse value%identityAlignment
O48964 Isopentenyl-diphosphate Delta-isomerase I2.6e-11582.25Show/hide
Query:  SAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEED
        +A D+ MDAVQ+RLMF+D+CILVDENDN+VGHD+KYNCHLM+ IES   LHRAFSVFLFNS++ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+E+
Subjt:  SAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEED

Query:  SLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEHELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFR
        +LG RNAAQRKL DELGI AEDVPVDQFI +GRILYKAPSDG+WGEHELDYLLF+VR+VNVNPNP+EVADIKYV ++QLKELLRKADAGE+G+KLSPWFR
Subjt:  SLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEHELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFR

Query:  LVVNNFLFKWWDHLEKGTLQEVVDMKTIHKL
        LVV+NFLFKWWDH+EKGT+ E  DMK+IHKL
Subjt:  LVVNNFLFKWWDHLEKGTLQEVVDMKTIHKL

O48965 Isopentenyl-diphosphate Delta-isomerase II1.4e-11680Show/hide
Query:  STKTAVG-SAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYR
        +T +A+G +A D+ MDAVQRRLMF+DECILVDEND++VGHD+KYNCHLM+ IES+  LHRAFSVFLFNS++ELLLQQRS TKVTFPLVWTNTCCSHP YR
Subjt:  STKTAVG-SAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESNKALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYR

Query:  ESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEHELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDG
        ESEL++E++LGVRNAAQRKL DELGI AEDVPVDQFI +GR+LYKAPSDG+WGEHELDYLLF++R+VNV+PNP+EVAD+KYVNQ+QLK+LLRK DAGE+G
Subjt:  ESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEHELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDG

Query:  VKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT
        +KLSPWFRLVV NFLFKWWDH+EKGTLQ+  DMKTIHKLT
Subjt:  VKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT

Q39471 Isopentenyl-diphosphate Delta-isomerase II1.9e-11371.58Show/hide
Query:  TLSSHLLKTTLSL--SLSSSINFSSKCRFSSAFAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIES
        +L+S L K  LS   S  S        R S   AP  L   LS   ++T  A+G A D+ MDAVQRRLMFDDECILVDE D +VGH+SKYNCH+ + IES
Subjt:  TLSSHLLKTTLSL--SLSSSINFSSKCRFSSAFAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIES

Query:  NKALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGE
           LHRAFSVFLFNS+FELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+E++LGVRNAAQRKL DELGI AEDVPVD+F  + R+LYKAPSDG+WGE
Subjt:  NKALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGE

Query:  HELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKL
        HELDYLLF+VR+V V+PNP+EVA+IKYVN+EQLKELL+KADAGE+G+KLSPWFRLVV+NFL KWWDH+EKGTL E VDMK+IHKL
Subjt:  HELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKL

Q39664 Isopentenyl-diphosphate Delta-isomerase II7.2e-11371.38Show/hide
Query:  TLSSHLLKTTLSLSLSSSINF------SSKCRFSSAFAPRPLIARLSRCCLSTKTAVG-SAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLM
        +L+S L K  L  SL S  +F      S   R S   AP  + A LS   ++T  A+G +A D+ MDAVQRRLMFDDECILVDE D +VGH+SKYNCHL 
Subjt:  TLSSHLLKTTLSLSLSSSINF------SSKCRFSSAFAPRPLIARLSRCCLSTKTAVG-SAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLM

Query:  DNIESNKALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSD
        + IES   LHRAF+VFLFNS+FELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+E++LGVRNAAQRKL DELGI AEDVPVD+F  + R+LYKAPSD
Subjt:  DNIESNKALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSD

Query:  GRWGEHELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKL
        G+WGEHELDYLLF+VR+V ++PNP+EVADIKYVN+EQLKELLRKADAGE+G+KLSPWFRLVV+NFL KWWDH+EKGTL E VDMKTIH L
Subjt:  GRWGEHELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKL

Q42553 Isopentenyl-diphosphate Delta-isomerase II, chloroplastic5.5e-11371.74Show/hide
Query:  SLSLSSSINFSSKCRFSSAFAPRPLIA----RLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESNKALHRAFS
        SL+LSSS +       S  FA RPL +    +L      + TA+    D+ MDAVQRRLMF+DECILVDE D +VGHDSKYNCHLM+NIE+   LHRAFS
Subjt:  SLSLSSSINFSSKCRFSSAFAPRPLIA----RLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESNKALHRAFS

Query:  VFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEHELDYLLFV
        VFLFNS++ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI++++LGVRNAAQRKL DELGI AEDVPVD+F  +GR+LYKAPSDG+WGEHELDYLLF+
Subjt:  VFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEHELDYLLFV

Query:  VRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKL
        VR+V V PNP+EVA+IKYV++E+LKEL++KADAGE+G+KLSPWFRLVV+NFL KWWDH+EKGTL E +DMKTIHKL
Subjt:  VRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKL

Arabidopsis top hitse value%identityAlignment
AT3G02780.1 isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 23.9e-11471.74Show/hide
Query:  SLSLSSSINFSSKCRFSSAFAPRPLIA----RLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESNKALHRAFS
        SL+LSSS +       S  FA RPL +    +L      + TA+    D+ MDAVQRRLMF+DECILVDE D +VGHDSKYNCHLM+NIE+   LHRAFS
Subjt:  SLSLSSSINFSSKCRFSSAFAPRPLIA----RLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESNKALHRAFS

Query:  VFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEHELDYLLFV
        VFLFNS++ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI++++LGVRNAAQRKL DELGI AEDVPVD+F  +GR+LYKAPSDG+WGEHELDYLLF+
Subjt:  VFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEHELDYLLFV

Query:  VRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKL
        VR+V V PNP+EVA+IKYV++E+LKEL++KADAGE+G+KLSPWFRLVV+NFL KWWDH+EKGTL E +DMKTIHKL
Subjt:  VRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKL

AT5G16440.1 isopentenyl diphosphate isomerase 14.8e-11269.72Show/hide
Query:  PTLSSHLLKTTLSLSLSSSINFSSKCRFSSAFAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN
        P+     L  +LS S SSS +  +  R S   +P P   +LS    S  T   S  D+ MDAVQRRLMF+DECILVDEND +VGHD+KYNCHLM+ IE+ 
Subjt:  PTLSSHLLKTTLSLSLSSSINFSSKCRFSSAFAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESN

Query:  KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEH
          LHRAFSVFLFNS++ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELIEE+ LGVRNAAQRKLFDELGI AEDVPVD+F  +GR+LYKAPSDG+WGEH
Subjt:  KALHRAFSVFLFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEH

Query:  ELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKL
        E+DYLLF+VR+V + PNP+EVA+IKYV++E+LKEL++KADAG++ VKLSPWFRLVV+NFL KWWDH+EKGT+ E  DMKTIHKL
Subjt:  ELDYLLFVVRNVNVNPNPEEVADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCGACTCTGAGCTCTCATCTTCTCAAGACCACTCTCTCCCTCTCACTTTCATCTTCCATTAACTTCTCTTCCAAATGTCGTTTCTCTTCCGCTTTTGCTCCTCGCCCCCT
CATCGCTAGGCTCTCCCGCTGCTGCCTCTCCACCAAGACCGCCGTCGGCTCCGCTCCTGATTCTGCCATGGATGCCGTCCAGAGGCGCCTTATGTTCGATGATGAATGCA
TTTTGGTGGACGAAAATGATAATATTGTTGGTCATGATTCTAAATATAATTGTCACTTGATGGATAATATTGAGTCAAACAAAGCGCTCCATAGAGCTTTCAGTGTCTTC
TTGTTTAACTCTAGATTTGAGTTGCTTCTTCAGCAACGTTCTCCTACGAAGGTAACATTTCCTCTTGTTTGGACGAACACTTGCTGCAGCCATCCATTGTACAGGGAATC
TGAGCTTATTGAGGAGGATTCACTTGGAGTAAGGAATGCTGCACAGAGGAAACTTTTTGATGAACTTGGTATTGCTGCTGAAGACGTGCCGGTTGATCAATTCATTTCTA
TTGGCCGCATTCTCTACAAGGCACCATCTGATGGAAGATGGGGAGAGCACGAGCTTGACTACCTCCTCTTCGTAGTTCGGAACGTAAATGTCAATCCGAACCCAGAAGAA
GTGGCGGATATCAAATACGTGAACCAGGAACAATTGAAAGAGCTGTTGAGGAAAGCAGATGCTGGAGAAGATGGGGTAAAGTTGTCGCCTTGGTTCAGGCTGGTTGTGAA
CAACTTCTTATTCAAGTGGTGGGACCATCTTGAGAAGGGGACTCTCCAGGAAGTTGTTGACATGAAAACCATTCACAAGCTTACC
mRNA sequenceShow/hide mRNA sequence
CCGACTCTGAGCTCTCATCTTCTCAAGACCACTCTCTCCCTCTCACTTTCATCTTCCATTAACTTCTCTTCCAAATGTCGTTTCTCTTCCGCTTTTGCTCCTCGCCCCCT
CATCGCTAGGCTCTCCCGCTGCTGCCTCTCCACCAAGACCGCCGTCGGCTCCGCTCCTGATTCTGCCATGGATGCCGTCCAGAGGCGCCTTATGTTCGATGATGAATGCA
TTTTGGTGGACGAAAATGATAATATTGTTGGTCATGATTCTAAATATAATTGTCACTTGATGGATAATATTGAGTCAAACAAAGCGCTCCATAGAGCTTTCAGTGTCTTC
TTGTTTAACTCTAGATTTGAGTTGCTTCTTCAGCAACGTTCTCCTACGAAGGTAACATTTCCTCTTGTTTGGACGAACACTTGCTGCAGCCATCCATTGTACAGGGAATC
TGAGCTTATTGAGGAGGATTCACTTGGAGTAAGGAATGCTGCACAGAGGAAACTTTTTGATGAACTTGGTATTGCTGCTGAAGACGTGCCGGTTGATCAATTCATTTCTA
TTGGCCGCATTCTCTACAAGGCACCATCTGATGGAAGATGGGGAGAGCACGAGCTTGACTACCTCCTCTTCGTAGTTCGGAACGTAAATGTCAATCCGAACCCAGAAGAA
GTGGCGGATATCAAATACGTGAACCAGGAACAATTGAAAGAGCTGTTGAGGAAAGCAGATGCTGGAGAAGATGGGGTAAAGTTGTCGCCTTGGTTCAGGCTGGTTGTGAA
CAACTTCTTATTCAAGTGGTGGGACCATCTTGAGAAGGGGACTCTCCAGGAAGTTGTTGACATGAAAACCATTCACAAGCTTACC
Protein sequenceShow/hide protein sequence
PTLSSHLLKTTLSLSLSSSINFSSKCRFSSAFAPRPLIARLSRCCLSTKTAVGSAPDSAMDAVQRRLMFDDECILVDENDNIVGHDSKYNCHLMDNIESNKALHRAFSVF
LFNSRFELLLQQRSPTKVTFPLVWTNTCCSHPLYRESELIEEDSLGVRNAAQRKLFDELGIAAEDVPVDQFISIGRILYKAPSDGRWGEHELDYLLFVVRNVNVNPNPEE
VADIKYVNQEQLKELLRKADAGEDGVKLSPWFRLVVNNFLFKWWDHLEKGTLQEVVDMKTIHKLT