; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS021990 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS021990
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionU3 small nucleolar RNA-associated protein 11
Genome locationscaffold110:899561..901875
RNA-Seq ExpressionMS021990
SyntenyMS021990
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
InterPro domainsIPR007144 - Small-subunit processome, Utp11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586143.1 putative U3 small nucleolar RNA-associated protein 11, partial [Cucurbita argyrosperma subsp. sororia]3.6e-10488.21Show/hide
Query:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG
        MSSLKNAV +RPYKERAQP SRKKFGLLEKHKDY+ERAKAYHKKEDTLR LKEKAAF+NPDEFYFKMI+TRTVDGVH+ ESQ NKYTAEQLMLMKTQD+G
Subjt:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG

Query:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
        YILQK+QSEK+KIEKLTATLHSLD+QPSNKH+YFAEDREEANEIQSR + GRS ASSEAVPDSI+RKT++SYKELEARRSRVSELEKLYMDMTLQQEL K
Subjt:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGCKRKLREDELANPTSKPIYKWRKERKR
        KG KRKLREDEL NPTSKP+YKWR ERKR
Subjt:  KGCKRKLREDELANPTSKPIYKWRKERKR

XP_008441892.1 PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo]6.1e-10490.83Show/hide
Query:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG
        MSSL+NAV RRPYKERAQPQSRKKFGLLEKHKDYIERAKA+HKKEDTLR LKEKAAF+NPDEFYFKMIRTRTVDGVHK ES+ NKYTAEQLMLMKTQD+G
Subjt:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG

Query:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
        YILQKMQSEKKKIEKLTATLHSLD+QPSNKHLYFAEDREEANEI SR + G   ASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
Subjt:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGCKRKLREDELANPTSKPIYKWRKERKR
        KG KRKLREDE+ANPTSKP+YKWR ERKR
Subjt:  KGCKRKLREDELANPTSKPIYKWRKERKR

XP_022149947.1 probable U3 small nucleolar RNA-associated protein 11 [Momordica charantia]1.0e-11498.69Show/hide
Query:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG
        MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG
Subjt:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG

Query:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
        YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEAN+IQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
Subjt:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGCKRKLREDELANPTSKPIYKWRKERKR
        KG KRKL EDELANPTSKPIYKWRKERKR
Subjt:  KGCKRKLREDELANPTSKPIYKWRKERKR

XP_022937708.1 probable U3 small nucleolar RNA-associated protein 11 [Cucurbita moschata]2.3e-10387.77Show/hide
Query:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG
        MSSLKNAV +RPYKERAQP SRKKFGLLEKHKDY+ERAKAYHKKEDTLR LKEKAAF+NPDEFYFKMI+TRTVDGVH+ ESQ NKYTAEQLMLMKTQD+G
Subjt:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG

Query:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
        YILQK+QSEK+KIEKLTATLHSLD+QPSNKH+YFAEDREEANEIQSR +  RS ASSEAVPDSI+RKT++SYKELEARRSRVSELEKLYMDMTLQQEL K
Subjt:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGCKRKLREDELANPTSKPIYKWRKERKR
        KG KRKLREDEL NPTSKP+YKWR ERKR
Subjt:  KGCKRKLREDELANPTSKPIYKWRKERKR

XP_023536927.1 probable U3 small nucleolar RNA-associated protein 11 [Cucurbita pepo subsp. pepo]6.1e-10488.21Show/hide
Query:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG
        MSSLKNAV +RPYKERAQP  RKKFGLLEKHKDY+ERAKAYHKKEDTLR LKEKAAF+NPDEFYFKMI+TRTVDGVH+ ESQ NKYTAEQLMLMKTQD+G
Subjt:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG

Query:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
        YILQK+QSEK+KIEKLTATLHSLD+QPSNKH+YFAEDREEANEIQSR + GRS ASSEAVPDSI+RKT++SYKELEARRSRVSELEKLYMDMTLQQEL K
Subjt:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGCKRKLREDELANPTSKPIYKWRKERKR
        KG KRKLREDELANPTSKP+YKWR ERKR
Subjt:  KGCKRKLREDELANPTSKPIYKWRKERKR

TrEMBL top hitse value%identityAlignment
A0A1S3B400 U3 small nucleolar RNA-associated protein 113.0e-10490.83Show/hide
Query:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG
        MSSL+NAV RRPYKERAQPQSRKKFGLLEKHKDYIERAKA+HKKEDTLR LKEKAAF+NPDEFYFKMIRTRTVDGVHK ES+ NKYTAEQLMLMKTQD+G
Subjt:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG

Query:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
        YILQKMQSEKKKIEKLTATLHSLD+QPSNKHLYFAEDREEANEI SR + G   ASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
Subjt:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGCKRKLREDELANPTSKPIYKWRKERKR
        KG KRKLREDE+ANPTSKP+YKWR ERKR
Subjt:  KGCKRKLREDELANPTSKPIYKWRKERKR

A0A5A7TX11 U3 small nucleolar RNA-associated protein 113.0e-10490.83Show/hide
Query:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG
        MSSL+NAV RRPYKERAQPQSRKKFGLLEKHKDYIERAKA+HKKEDTLR LKEKAAF+NPDEFYFKMIRTRTVDGVHK ES+ NKYTAEQLMLMKTQD+G
Subjt:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG

Query:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
        YILQKMQSEKKKIEKLTATLHSLD+QPSNKHLYFAEDREEANEI SR + G   ASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
Subjt:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGCKRKLREDELANPTSKPIYKWRKERKR
        KG KRKLREDE+ANPTSKP+YKWR ERKR
Subjt:  KGCKRKLREDELANPTSKPIYKWRKERKR

A0A6J1D9E0 U3 small nucleolar RNA-associated protein 114.9e-11598.69Show/hide
Query:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG
        MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG
Subjt:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG

Query:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
        YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEAN+IQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
Subjt:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGCKRKLREDELANPTSKPIYKWRKERKR
        KG KRKL EDELANPTSKPIYKWRKERKR
Subjt:  KGCKRKLREDELANPTSKPIYKWRKERKR

A0A6J1FGQ3 U3 small nucleolar RNA-associated protein 111.1e-10387.77Show/hide
Query:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG
        MSSLKNAV +RPYKERAQP SRKKFGLLEKHKDY+ERAKAYHKKEDTLR LKEKAAF+NPDEFYFKMI+TRTVDGVH+ ESQ NKYTAEQLMLMKTQD+G
Subjt:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG

Query:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
        YILQK+QSEK+KIEKLTATLHSLD+QPSNKH+YFAEDREEANEIQSR +  RS ASSEAVPDSI+RKT++SYKELEARRSRVSELEKLYMDMTLQQEL K
Subjt:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGCKRKLREDELANPTSKPIYKWRKERKR
        KG KRKLREDEL NPTSKP+YKWR ERKR
Subjt:  KGCKRKLREDELANPTSKPIYKWRKERKR

A0A6J1HNU6 U3 small nucleolar RNA-associated protein 111.5e-10387.77Show/hide
Query:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG
        MSSLKNAV +RPYKERAQP SRKKFGLLEKHKDY+ERAKAYHKKEDTLR LKEKAAF+NPDEFYFKMI+TRTVDGVH+ ESQ NKYTAEQLMLMKTQD+G
Subjt:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG

Query:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
        YILQK+QSEK+KIEKLTATLHSLD+QPSNKH+YFAEDREEANEIQSR + GRS ASSEAVPDSI+RKT++SYKELEARRSRVSELEKLYMDMTLQQEL K
Subjt:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGCKRKLREDELANPTSKPIYKWRKERKR
        KG KRKLREDEL NPTSK +YKWR ERKR
Subjt:  KGCKRKLREDELANPTSKPIYKWRKERKR

SwissProt top hitse value%identityAlignment
A6ZZL7 U3 small nucleolar RNA-associated protein 112.0e-2532.82Show/hide
Query:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKL------ESQANKYTAEQLMLM
        M+ L + V ++ ++ER+Q  SR ++G LEKHKDY++RA+ +H+K+ TL++L+EKA  RNPDE+Y  M  +R  D    L      + +    + +Q+ L+
Subjt:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKL------ESQANKYTAEQLMLM

Query:  KTQDSGYILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEI----------------QSRFTNGRSA--------ASSEAVPDSIRRKTVA
        KTQDS Y+    Q E KK+EK       L  + S  H  F + RE+ NE                 ++R T  + A        ASS    +S+ +K + 
Subjt:  KTQDSGYILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEI----------------QSRFTNGRSA--------ASSEAVPDSIRRKTVA

Query:  SYKELEARRSRVSELEKLYMDMTLQQELRKKGCKRKLREDELANPTSKPIYKWRKERKR
         +K+++    R ++L+++   M  Q+EL KKG K+K     + + + K  +KW+K+RKR
Subjt:  SYKELEARRSRVSELEKLYMDMTLQQELRKKGCKRKLREDELANPTSKPIYKWRKERKR

B5VM59 U3 small nucleolar RNA-associated protein 112.0e-2532.82Show/hide
Query:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKL------ESQANKYTAEQLMLM
        M+ L + V ++ ++ER+Q  SR ++G LEKHKDY++RA+ +H+K+ TL++L+EKA  RNPDE+Y  M  +R  D    L      + +    + +Q+ L+
Subjt:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKL------ESQANKYTAEQLMLM

Query:  KTQDSGYILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEI----------------QSRFTNGRSA--------ASSEAVPDSIRRKTVA
        KTQDS Y+    Q E KK+EK       L  + S  H  F + RE+ NE                 ++R T  + A        ASS    +S+ +K + 
Subjt:  KTQDSGYILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEI----------------QSRFTNGRSA--------ASSEAVPDSIRRKTVA

Query:  SYKELEARRSRVSELEKLYMDMTLQQELRKKGCKRKLREDELANPTSKPIYKWRKERKR
         +K+++    R ++L+++   M  Q+EL KKG K+K     + + + K  +KW+K+RKR
Subjt:  SYKELEARRSRVSELEKLYMDMTLQQELRKKGCKRKLREDELANPTSKPIYKWRKERKR

Q8S1Z1 Probable U3 small nucleolar RNA-associated protein 111.7e-8066.38Show/hide
Query:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG
        MSSL+NA+ RR +KERAQP+SRKKFGLLEKHKDYI RAKA+H+KE+T+R LKEKA+FRNPDEFYFKMI ++TVDG+H+ + +ANKYT ++LML+KT+D G
Subjt:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG

Query:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
        YILQ +QSEKKKIEKL++ LH LD++  NKH+YFAEDREE  EIQSR     S+   + +P  I+RKT +SY+ELE R+ RV +LEKLY DM LQ+EL+K
Subjt:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGCKRKLREDELANPTSKPIYKWRKERKR
         G KRKLREDE+ N TS+P+YKWR +RKR
Subjt:  KGCKRKLREDELANPTSKPIYKWRKERKR

Q9CZJ1 Probable U3 small nucleolar RNA-associated protein 115.3e-2636.89Show/hide
Query:  RRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSGYILQKMQSE
        +R ++ER+QP  RK+ GLLEK KDY  RA  YHKK+D LR L++KA  +NPDEFY+KM R +  DGVH  +    + TAEQL LM+TQD  YI  K  +E
Subjt:  RRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSGYILQKMQSE

Query:  KKKIEKLTATLHSLDSQ--PSNKHLYFAEDREE------------ANEIQSRFTNGRSAASSE------AVPDS----IRRKTVASYKELEARRSRVSEL
         KKIE+L + LH LD Q     KH++F + ++E            A E+  R  N     + +      A P +    I ++    Y  L  R  R  +L
Subjt:  KKKIEKLTATLHSLDSQ--PSNKHLYFAEDREE------------ANEIQSRFTNGRSAASSE------AVPDS----IRRKTVASYKELEARRSRVSEL

Query:  EKLYMDMTLQQELRKKGCKRKLREDELANPTSKPIYKWRKERKR
          +   +  +++L  K  K K++++ + +P    IY+++  RKR
Subjt:  EKLYMDMTLQQELRKKGCKRKLREDELANPTSKPIYKWRKERKR

Q9M223 Probable U3 small nucleolar RNA-associated protein 113.5e-7058.95Show/hide
Query:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG
        MSSL+NA+ R  +KER+QP++RK+FG+LEKHKDYI RA AYHKK++TL+IL++KAAF+NPDEF FKMI ++TVDG H+ + + NKY+AE+LM+MKTQD G
Subjt:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG

Query:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
        Y+ QK QSEK KI+KLTA+L     Q S +H+Y+AEDREEA E++ +    +S  S+  +P  I++K   SY++LE R+SR  +LEKLY DM++Q+EL+K
Subjt:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGCKRKLREDELANPTSKPIYKWRKERKR
        KG KRKLR+DEL NP  K +YKWR +RKR
Subjt:  KGCKRKLREDELANPTSKPIYKWRKERKR

Arabidopsis top hitse value%identityAlignment
AT3G60360.1 embryo sac development arrest 142.5e-7158.95Show/hide
Query:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG
        MSSL+NA+ R  +KER+QP++RK+FG+LEKHKDYI RA AYHKK++TL+IL++KAAF+NPDEF FKMI ++TVDG H+ + + NKY+AE+LM+MKTQD G
Subjt:  MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSG

Query:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK
        Y+ QK QSEK KI+KLTA+L     Q S +H+Y+AEDREEA E++ +    +S  S+  +P  I++K   SY++LE R+SR  +LEKLY DM++Q+EL+K
Subjt:  YILQKMQSEKKKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRK

Query:  KGCKRKLREDELANPTSKPIYKWRKERKR
        KG KRKLR+DEL NP  K +YKWR +RKR
Subjt:  KGCKRKLREDELANPTSKPIYKWRKERKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCCCTAAAGAATGCGGTCTCTCGACGGCCTTACAAGGAGCGAGCTCAGCCGCAATCTCGGAAGAAATTTGGGCTTCTTGAGAAACACAAAGACTATATTGAGCG
TGCTAAGGCTTATCACAAGAAGGAGGATACTTTACGGATACTTAAAGAGAAGGCAGCCTTCAGGAATCCAGATGAATTTTACTTTAAGATGATTAGGACGAGAACAGTTG
ATGGAGTCCATAAACTAGAGAGTCAGGCAAATAAGTATACTGCGGAGCAACTCATGCTGATGAAAACCCAAGATTCTGGCTATATACTTCAGAAAATGCAGAGTGAGAAA
AAGAAAATTGAAAAATTGACAGCCACGTTACATTCTCTTGATAGTCAGCCATCAAATAAGCATCTTTACTTTGCTGAAGACAGGGAGGAGGCCAATGAAATTCAATCCCG
TTTTACCAACGGTAGATCTGCGGCATCTTCTGAGGCAGTTCCTGATAGTATTAGAAGGAAAACCGTTGCTTCTTACAAAGAATTGGAGGCAAGGAGGAGTAGAGTCAGTG
AATTAGAGAAACTTTATATGGATATGACACTGCAACAGGAATTAAGGAAAAAAGGATGCAAACGTAAACTTCGGGAAGATGAACTCGCCAATCCGACTTCAAAACCTATA
TACAAGTGGCGGAAAGAACGAAAGCGC
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCCCTAAAGAATGCGGTCTCTCGACGGCCTTACAAGGAGCGAGCTCAGCCGCAATCTCGGAAGAAATTTGGGCTTCTTGAGAAACACAAAGACTATATTGAGCG
TGCTAAGGCTTATCACAAGAAGGAGGATACTTTACGGATACTTAAAGAGAAGGCAGCCTTCAGGAATCCAGATGAATTTTACTTTAAGATGATTAGGACGAGAACAGTTG
ATGGAGTCCATAAACTAGAGAGTCAGGCAAATAAGTATACTGCGGAGCAACTCATGCTGATGAAAACCCAAGATTCTGGCTATATACTTCAGAAAATGCAGAGTGAGAAA
AAGAAAATTGAAAAATTGACAGCCACGTTACATTCTCTTGATAGTCAGCCATCAAATAAGCATCTTTACTTTGCTGAAGACAGGGAGGAGGCCAATGAAATTCAATCCCG
TTTTACCAACGGTAGATCTGCGGCATCTTCTGAGGCAGTTCCTGATAGTATTAGAAGGAAAACCGTTGCTTCTTACAAAGAATTGGAGGCAAGGAGGAGTAGAGTCAGTG
AATTAGAGAAACTTTATATGGATATGACACTGCAACAGGAATTAAGGAAAAAAGGATGCAAACGTAAACTTCGGGAAGATGAACTCGCCAATCCGACTTCAAAACCTATA
TACAAGTGGCGGAAAGAACGAAAGCGC
Protein sequenceShow/hide protein sequence
MSSLKNAVSRRPYKERAQPQSRKKFGLLEKHKDYIERAKAYHKKEDTLRILKEKAAFRNPDEFYFKMIRTRTVDGVHKLESQANKYTAEQLMLMKTQDSGYILQKMQSEK
KKIEKLTATLHSLDSQPSNKHLYFAEDREEANEIQSRFTNGRSAASSEAVPDSIRRKTVASYKELEARRSRVSELEKLYMDMTLQQELRKKGCKRKLREDELANPTSKPI
YKWRKERKR