CuGenDBv2

Gene ID	MS022012
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	prefoldin subunit 1
Genome location	scaffold110:1149172..1149935
RNA-Seq Expression	MS022012
Synteny	MS022012
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0005737 - cytoplasm (cellular component) GO:0016272 - prefoldin complex (cellular component) GO:0044183 - protein folding chaperone (molecular function) GO:0051082 - unfolded protein binding (molecular function)
InterPro domains	IPR002777 - Prefoldin beta-like IPR009053 - Prefoldin

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7020949.1 Prefoldin subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.8e-36

90.72

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Query:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSIEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSMSVA
        VQ+Q+RNKEGEKKRAFLTLEEL+QLS+DTNAYKSIEPKSVLM EQEQK KDSEAAI SLQ+SKEYLEKQ AEVENNLRELLQQDPGIARQIMSMSVA
Subjt:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSIEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSMSVA

RWR82635.1 prefoldin subunit 1 [Cinnamomum micranthum f. kanehirae]

1.1e-35

85.44

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Query:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM
        VQTQIRNKEGEKKRA+LTLEELRQLS+DTN YKSI      EPKSVL+NEQEQKLKDSEAAIASLQTSKEYLEKQMAE+ENNLRELLQQDPG+ARQIMS+
Subjt:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM

Query:  SVA
        S +
Subjt:  SVA

XP_022149806.1 prefoldin subunit 1 [Momordica charantia]

8.5e-39

94.17

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Query:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM
        VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI      EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM
Subjt:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM

Query:  SVA
        SVA
Subjt:  SVA

XP_022929581.1 prefoldin subunit 1-like [Cucurbita moschata]

6.7e-36

87.38

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Query:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM
        VQTQIRNKEGEKKRAFLTLEEL+QLS+DTNAYKSI      EPKSVLMNEQEQKLKDSEAAI SL +SKEYLEKQ+AEVENNLRELLQQDPGIARQIMSM
Subjt:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM

Query:  SVA
        S+A
Subjt:  SVA

XP_023546624.1 prefoldin subunit 1-like [Cucurbita pepo subsp. pepo]

1.5e-35

87.38

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Query:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM
        VQTQIRNKEGEKKRAFLTLEEL+QLS+DTNAYKSI      EPKSVLMNEQEQKLKDSEA I SL +SKEYLEKQ+AEVENNLRELLQQDPGIARQIMSM
Subjt:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM

Query:  SVA
        SVA
Subjt:  SVA

TrEMBL top hits

e value

%identity

Alignment

A0A061FRM5 Prefoldin 1

2.1e-35

86.27

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Query:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM
        VQ Q+RNKEGEKKRA+LTLEELRQLS+DTN YKSI      EPK VLMNEQEQKLKDSE+AIASLQTSKEYLEKQMAEVENNLRELLQQDPG+ARQIMSM
Subjt:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM

Query:  SV
        SV
Subjt:  SV

A0A0A0LJF7 Uncharacterized protein

2.8e-35

86.41

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Query:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM
        +QTQIRNKEGEKKRAFLTLEEL+QL+EDTN YKSI      E KSVLMNEQEQK KDSE AIASLQ+SKEYLEKQMAEVENNLRELLQQDPGIARQIMSM
Subjt:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM

Query:  SVA
        SVA
Subjt:  SVA

A0A443NVT7 Prefoldin subunit 1

5.6e-36

85.44

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Query:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM
        VQTQIRNKEGEKKRA+LTLEELRQLS+DTN YKSI      EPKSVL+NEQEQKLKDSEAAIASLQTSKEYLEKQMAE+ENNLRELLQQDPG+ARQIMS+
Subjt:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM

Query:  SVA
        S +
Subjt:  SVA

A0A6J1D9I1 prefoldin subunit 1

4.1e-39

94.17

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Query:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM
        VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI      EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM
Subjt:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM

Query:  SVA
        SVA
Subjt:  SVA

A0A6J1ENI7 prefoldin subunit 1-like

3.3e-36

87.38

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Query:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM
        VQTQIRNKEGEKKRAFLTLEEL+QLS+DTNAYKSI      EPKSVLMNEQEQKLKDSEAAI SL +SKEYLEKQ+AEVENNLRELLQQDPGIARQIMSM
Subjt:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM

Query:  SVA
        S+A
Subjt:  SVA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G07340.1 PREFOLDIN 1

7.9e-35

78.43

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Query:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM
        VQ Q+RNKEG++KRAFLTLEELR L E+TN YKSI      EPK+VL  EQEQKLKDSEAA+ASLQTSKEYLEKQ+AEVENNLRELLQQ+PGIA+QIMSM
Subjt:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI------EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSM

Query:  SV
        S+
Subjt:  SV

AT2G07340.2 PREFOLDIN 1

6.1e-35

79.21

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Query:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI-----EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSMS
        VQ Q+RNKEG++KRAFLTLEELR L E+TN YKSI     EPK+VL  EQEQKLKDSEAA+ASLQTSKEYLEKQ+AEVENNLRELLQQ+PGIA+QIMSMS
Subjt:  VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSI-----EPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSMS

Query:  V
        +
Subjt:  V

Sequences

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CDS sequence

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GTGCAGACCCAGATACGAAACAAGGAGGGTGAAAAGAAGCGTGCTTTCTTAACCTTGGAGGAACTTCGACAGTTGTCTGAAGACACTAATGCTTACAAATCTATAGAGCC
AAAGTCAGTTTTAATGAATGAACAGGAGCAGAAGCTAAAGGATAGTGAAGCTGCAATTGCCTCACTGCAGACATCAAAGGAGTATTTAGAGAAGCAAATGGCGGAGGTGG
AGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATTGCTCGCCAGATAATGTCCATGTCTGTAGCA

mRNA sequence

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Protein sequence

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VQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKSIEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIARQIMSMSVA

MS022012 (gene) of Bitter gourd (TR) v1 genome