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MS022017 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022017
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPeptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase isoform 1
Genome locationscaffold47:19464..19847
RNA-Seq ExpressionMS022017
SyntenyMS022017
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571994.1 hypothetical protein SDJN03_28722, partial [Cucurbita argyrosperma subsp. sororia]7.0e-4170.45Show/hide
Query:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRP---PPPAVESIPV
        MS+P+DQLQPPPT+     SG+GSVGPVIAVLAVISILGVIAG+IGRLCSGRPV GYG HYD+E WVE KCASC+DGSLDPPPP  P    PP ++++PV
Subjt:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRP---PPPAVESIPV

Query:  AEPVGGPPEMKEG-QPQRENLQPTPPGSGGES
         EP+GGPPE+K+G   +RENLQ   PG+GGES
Subjt:  AEPVGGPPEMKEG-QPQRENLQPTPPGSGGES

KAG7011671.1 hypothetical protein SDJN02_26577, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-4270.9Show/hide
Query:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRPP-----PPAVESI
        MS+P+DQLQPPPT+     SGHGSVGPVIAVLAVISILGVIAG+IGRLCSGRPV GYG HYD+E WVE KCASC+DGSLDPPPP  PP     PP ++++
Subjt:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRPP-----PPAVESI

Query:  PVAEPVGGPPEMKEG-QPQRENLQPTPPGSGGES
        PV EP+GGPPE+K+G   +RENLQ   PG+GGES
Subjt:  PVAEPVGGPPEMKEG-QPQRENLQPTPPGSGGES

XP_022952791.1 uncharacterized protein LOC111455383 [Cucurbita moschata]7.8e-4070Show/hide
Query:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRP---PPPAVESIPV
        MS+P+DQLQPPPT+     SG+GSVGPVIAVLAVISILGVIAG+IGRLCSGRPV GYG HYD+E WVE KCASC+DGSLDPPPP  P    PP ++++PV
Subjt:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRP---PPPAVESIPV

Query:  AEPVGGPPEMKEG-QPQRENLQPTPPGSGG
         EP+GGPPE+K+G   +RENLQ   PG+GG
Subjt:  AEPVGGPPEMKEG-QPQRENLQPTPPGSGG

XP_022972364.1 uncharacterized protein LOC111470940 [Cucurbita maxima]2.7e-4070.99Show/hide
Query:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPP----RRPPPPAVESIP
        MS+P DQLQPPPT+     SGHGSVGPVIAVLAVISILGVIAG+IGRLCSGRPV GYG HYD+E WVE KCASC+DGSLDPPPP    R PPP  ++++P
Subjt:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPP----RRPPPPAVESIP

Query:  VAEPVGGPPEMKEG-QPQRENLQPTPPGSGG
        V EP+GGPPE+K+G   +RENLQ   PG+GG
Subjt:  VAEPVGGPPEMKEG-QPQRENLQPTPPGSGG

XP_022989510.1 uncharacterized protein LOC111486567 [Cucurbita maxima]6.0e-4071.76Show/hide
Query:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRPPPPAVESIPVAEP
        MS P+DQLQPPP +AA      GSVGPVIAVLAVISILG IAGMIGR+C GRPV GY  HYD+E WVE KCA+C+DGSLDPPP  RPPPP +E+IPVAEP
Subjt:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRPPPPAVESIPVAEP

Query:  VGGPPEMKE---GQPQRENLQPTPPGSGGES
        +GGPP +KE   G  +RENLQ  PPGSGGES
Subjt:  VGGPPEMKE---GQPQRENLQPTPPGSGGES

TrEMBL top hitse value%identityAlignment
A0A1S3C1T9 type IV secretion system protein virB10-like2.4e-3968.84Show/hide
Query:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRPP------PPAVES
        MS+PIDQLQPPP    P  S H SVGP+IAVLAVISILGVIAGMIGRLCSGRPV GYG HYD+E WVE KCASC+DGSLDPPPP  PP      PP ++S
Subjt:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRPP------PPAVES

Query:  IPVAEPVGG-PPEMKEG---QPQRENLQPTPPGSGGES
        +PVAEP+GG PPE+K+G     + ENLQ   PG+GGES
Subjt:  IPVAEPVGG-PPEMKEG---QPQRENLQPTPPGSGGES

A0A5A7SPN0 Type IV secretion system protein virB10-like2.4e-3968.84Show/hide
Query:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRPP------PPAVES
        MS+PIDQLQPPP    P  S H SVGP+IAVLAVISILGVIAGMIGRLCSGRPV GYG HYD+E WVE KCASC+DGSLDPPPP  PP      PP ++S
Subjt:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRPP------PPAVES

Query:  IPVAEPVGG-PPEMKEG---QPQRENLQPTPPGSGGES
        +PVAEP+GG PPE+K+G     + ENLQ   PG+GGES
Subjt:  IPVAEPVGG-PPEMKEG---QPQRENLQPTPPGSGGES

A0A6J1GL66 uncharacterized protein LOC1114553833.8e-4070Show/hide
Query:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRP---PPPAVESIPV
        MS+P+DQLQPPPT+     SG+GSVGPVIAVLAVISILGVIAG+IGRLCSGRPV GYG HYD+E WVE KCASC+DGSLDPPPP  P    PP ++++PV
Subjt:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRP---PPPAVESIPV

Query:  AEPVGGPPEMKEG-QPQRENLQPTPPGSGG
         EP+GGPPE+K+G   +RENLQ   PG+GG
Subjt:  AEPVGGPPEMKEG-QPQRENLQPTPPGSGG

A0A6J1IBA8 uncharacterized protein LOC1114709401.3e-4070.99Show/hide
Query:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPP----RRPPPPAVESIP
        MS+P DQLQPPPT+     SGHGSVGPVIAVLAVISILGVIAG+IGRLCSGRPV GYG HYD+E WVE KCASC+DGSLDPPPP    R PPP  ++++P
Subjt:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPP----RRPPPPAVESIP

Query:  VAEPVGGPPEMKEG-QPQRENLQPTPPGSGG
        V EP+GGPPE+K+G   +RENLQ   PG+GG
Subjt:  VAEPVGGPPEMKEG-QPQRENLQPTPPGSGG

A0A6J1JMK0 uncharacterized protein LOC1114865672.9e-4071.76Show/hide
Query:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRPPPPAVESIPVAEP
        MS P+DQLQPPP +AA      GSVGPVIAVLAVISILG IAGMIGR+C GRPV GY  HYD+E WVE KCA+C+DGSLDPPP  RPPPP +E+IPVAEP
Subjt:  MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRPPPPAVESIPVAEP

Query:  VGGPPEMKE---GQPQRENLQPTPPGSGGES
        +GGPP +KE   G  +RENLQ  PPGSGGES
Subjt:  VGGPPEMKE---GQPQRENLQPTPPGSGGES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G26520.1 unknown protein2.2e-1648.89Show/hide
Query:  QPPPT------SAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDP--PPPRRPPPP
        QPPP       S++  S+G+ ++GP IAV  V+++L V+A +IGRLCSG+ +LGY G YD+E W E++C SCIDG + P  P P   PPP
Subjt:  QPPPT------SAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDP--PPPRRPPPP

AT3G57500.1 unknown protein6.0e-1446.46Show/hide
Query:  LQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDG-----SLDPPPPRRPPPPAVE--SIPVAE
        + PP       +S H S+  ++ VLAVI+IL V+AG+  RLC GR  L +GG +D+E WVE KC SCID      S  P PP  PPP   E  S P AE
Subjt:  LQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDG-----SLDPPPPRRPPPPAVE--SIPVAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCTCCGATCGACCAGCTCCAGCCGCCGCCCACCTCCGCCGCCCCTCCCAGTTCCGGCCACGGCTCCGTTGGCCCCGTCATCGCCGTCCTCGCCGTCATTTCCAT
CCTCGGCGTCATTGCCGGCATGATCGGCCGCCTCTGCTCCGGCCGCCCTGTCCTCGGCTACGGCGGCCACTACGACCTCGAGTCCTGGGTCGAGACCAAATGTGCTTCGT
GTATCGATGGCTCGCTCGACCCTCCGCCGCCGCGTAGACCGCCGCCACCGGCGGTGGAGTCTATTCCGGTCGCGGAGCCGGTGGGCGGACCGCCGGAGATGAAGGAAGGG
CAGCCTCAGCGGGAGAATTTGCAGCCGACGCCTCCGGGAAGCGGCGGAGAGTCG
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCTCCGATCGACCAGCTCCAGCCGCCGCCCACCTCCGCCGCCCCTCCCAGTTCCGGCCACGGCTCCGTTGGCCCCGTCATCGCCGTCCTCGCCGTCATTTCCAT
CCTCGGCGTCATTGCCGGCATGATCGGCCGCCTCTGCTCCGGCCGCCCTGTCCTCGGCTACGGCGGCCACTACGACCTCGAGTCCTGGGTCGAGACCAAATGTGCTTCGT
GTATCGATGGCTCGCTCGACCCTCCGCCGCCGCGTAGACCGCCGCCACCGGCGGTGGAGTCTATTCCGGTCGCGGAGCCGGTGGGCGGACCGCCGGAGATGAAGGAAGGG
CAGCCTCAGCGGGAGAATTTGCAGCCGACGCCTCCGGGAAGCGGCGGAGAGTCG
Protein sequenceShow/hide protein sequence
MSSPIDQLQPPPTSAAPPSSGHGSVGPVIAVLAVISILGVIAGMIGRLCSGRPVLGYGGHYDLESWVETKCASCIDGSLDPPPPRRPPPPAVESIPVAEPVGGPPEMKEG
QPQRENLQPTPPGSGGES