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MS022025 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022025
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold47:77244..77414
RNA-Seq ExpressionMS022025
SyntenyMS022025
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031272.1 hypothetical protein E6C27_scaffold139G00250 [Cucumis melo var. makuwa]3.1e-1277.19Show/hide
Query:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
        M IQRLELCLELLRMAINFVVVVAESVG+V+H+E Q P   P A  RVP+PFVGFYP
Subjt:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
KAB2042822.1 hypothetical protein ES319_D02G244200v1 [Gossypium barbadense]1.2e-0550.88Show/hide
Query:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
        M +QRLE+C+EL+++A+ FVVVVAE+VG V+HQ   PP      +   P+P VGF P
Subjt:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
KJB32405.1 hypothetical protein B456_005G239600 [Gossypium raimondii]2.8e-0549.12Show/hide
Query:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
        M +Q+LE+C+EL+++A+ FVVVVAE+VG V+HQ   PP      +   P+P VGF P
Subjt:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
XP_015874275.1 uncharacterized protein LOC107411246 [Ziziphus jujuba]1.1e-0657.89Show/hide
Query:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
        M IQR+E+C+ELL+MAI FV+VVAE+VG V+HQ   P      A P  P+PF+GFYP
Subjt:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
XP_021286324.1 uncharacterized protein LOC110418034 [Herrania umbratica]8.1e-0552.73Show/hide
Query:  IQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
        +QRLE+C+ELL++AI FV+VVAE+VG V+HQ  + P      +   P+PFVGF P
Subjt:  IQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
TrEMBL top hitse value%identityAlignment
A0A0A0K3A1 Uncharacterized protein1.5e-1277.19Show/hide
Query:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
        M IQRLELCLELLRMAINFVVVVAESVG+V+H+E Q P   P A  RVP+PFVGFYP
Subjt:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
A0A5D2M247 Uncharacterized protein6.0e-0650.88Show/hide
Query:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
        M +QRLE+C+EL+++A+ FVVVVAE+VG V+HQ   PP      +   P+P VGF P
Subjt:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
A0A5D3C626 Uncharacterized protein1.5e-1277.19Show/hide
Query:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
        M IQRLELCLELLRMAINFVVVVAESVG+V+H+E Q P   P A  RVP+PFVGFYP
Subjt:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
A0A5J5SGN3 Uncharacterized protein6.0e-0650.88Show/hide
Query:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
        M +QRLE+C+EL+++A+ FVVVVAE+VG V+HQ   PP      +   P+P VGF P
Subjt:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
A0A6P3ZHL2 uncharacterized protein LOC1074112465.4e-0757.89Show/hide
Query:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
        M IQR+E+C+ELL+MAI FV+VVAE+VG V+HQ   P      A P  P+PF+GFYP
Subjt:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G19030.1 unknown protein2.5e-0440.91Show/hide
Query:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANP-----------RVPIPFVGF
        M  Q+LE+C+EL+++A+ FV  VAESV E          +PPP+ P            VPIP VGF
Subjt:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANP-----------RVPIPFVGF
AT4G33960.1 unknown protein2.3e-0545Show/hide
Query:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVP---IPFVGFYP
        M I+R+ELC+EL+++ + FVVVVAE+V  VM Q     HR PP  P +    +P+   YP
Subjt:  MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVP---IPFVGFYP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTCAGAGACTGGAACTCTGCTTGGAGCTGCTGAGAATGGCCATCAATTTTGTCGTAGTCGTCGCCGAATCCGTCGGCGAGGTCATGCACCAGGAGTCTCAGCC
GCCGCACCGGCCGCCGCCGGCAAATCCTCGGGTTCCGATTCCGTTCGTCGGATTTTACCCC
mRNA sequenceShow/hide mRNA sequence
ATGGCGATTCAGAGACTGGAACTCTGCTTGGAGCTGCTGAGAATGGCCATCAATTTTGTCGTAGTCGTCGCCGAATCCGTCGGCGAGGTCATGCACCAGGAGTCTCAGCC
GCCGCACCGGCCGCCGCCGGCAAATCCTCGGGTTCCGATTCCGTTCGTCGGATTTTACCCC
Protein sequenceShow/hide protein sequence
MAIQRLELCLELLRMAINFVVVVAESVGEVMHQESQPPHRPPPANPRVPIPFVGFYP