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MS022046 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022046
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDA1
Genome locationscaffold47:265382..265825
RNA-Seq ExpressionMS022046
SyntenyMS022046
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR022087 - Protein DA1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9844077.1 hypothetical protein H0E87_018311, partial [Populus deltoides]5.8e-1841.88Show/hide
Query:  VKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEA---ESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDR
        V TG ++AHE +HAW R+QG+  +   +EEGICQV+ Y+WL+W EA   E+SSS S         +F + L K++K ++E      YG GFR+ + AV R
Subjt:  VKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEA---ESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDR

Query:  HGLQTIVGYISLYKCLP
        +GL  ++ +I  +K LP
Subjt:  HGLQTIVGYISLYKCLP

PNT20775.1 hypothetical protein POPTR_009G111500 [Populus trichocarpa]4.4e-1841.88Show/hide
Query:  VKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEA---ESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDR
        V TG ++AHE +HAW R+QG+  +   +EEGICQV+ Y+WL+W EA   E+SSS S         +F++ L K++K ++E      YG GFR+ + AV R
Subjt:  VKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEA---ESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDR

Query:  HGLQTIVGYISLYKCLP
        +GL  ++ +I  +K LP
Subjt:  HGLQTIVGYISLYKCLP

TKS05322.1 hypothetical protein D5086_0000134190 [Populus alba]4.4e-1841.88Show/hide
Query:  VKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEA---ESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDR
        V TG ++AHE +HAW R+QG+  +   +EEGICQV+ Y+WL+W EA   E+SSS S         +F++ L K++K ++E      YG GFR+ + AV R
Subjt:  VKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEA---ESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDR

Query:  HGLQTIVGYISLYKCLP
        +GL  ++ +I  +K LP
Subjt:  HGLQTIVGYISLYKCLP

XP_011004812.1 PREDICTED: protein DA1-like [Populus euphratica]2.0e-1841.23Show/hide
Query:  VKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDRHGL
        V TG ++AHE +HAW R+QG+  +   +EEGICQV+ Y+WL+W EA    + S   G     +F + L K++K ++E      YG GFR+ + AV R+GL
Subjt:  VKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDRHGL

Query:  QTIVGYISLYKCLP
          ++ +I  YK LP
Subjt:  QTIVGYISLYKCLP

XP_031744668.1 protein DA1-like [Cucumis sativus]6.8e-1941.96Show/hide
Query:  TGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDRHGLQT
        TG+++AHE++HAWFR+Q +  +E  +EEGICQVI  +WL+W E +          GG   +F K L+K+ K  +E +  E YG GFR+ + AV R+GL+ 
Subjt:  TGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDRHGLQT

Query:  IVGYISLYKCLP
         + +I  Y  LP
Subjt:  IVGYISLYKCLP

TrEMBL top hitse value%identityAlignment
A0A2P6QBL9 Uncharacterized protein3.1e-1740.87Show/hide
Query:  RVKTGSLMAHELLHAWFRVQGLPL--MEGPLEEGICQVIAYEWLNWIEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDR
        ++ T +++AHE++H WFR +G+    +E  LEEG+CQVI ++WL+W+++E +SS S         +F++KL+++YK  +E    +EYG GFR V+ AV R
Subjt:  RVKTGSLMAHELLHAWFRVQGLPL--MEGPLEEGICQVIAYEWLNWIEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDR

Query:  HGLQTIVGY-ISLYK
         GL+T + + I+ YK
Subjt:  HGLQTIVGY-ISLYK

A0A4U5Q6F3 Uncharacterized protein2.1e-1841.88Show/hide
Query:  VKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEA---ESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDR
        V TG ++AHE +HAW R+QG+  +   +EEGICQV+ Y+WL+W EA   E+SSS S         +F++ L K++K ++E      YG GFR+ + AV R
Subjt:  VKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEA---ESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDR

Query:  HGLQTIVGYISLYKCLP
        +GL  ++ +I  +K LP
Subjt:  HGLQTIVGYISLYKCLP

A0A6P6AB63 protein DA1-like1.8e-1740.68Show/hide
Query:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIE---AESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVD
        R+ TG++MAHEL+HAW + +G+  +E  +EEGICQVIA+EWL W E    E+SSS S         +F + L ++++  +E ++   YG GFR+ K AV+
Subjt:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIE---AESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVD

Query:  RHGLQTIVGYISLYKCLP
        + G   +V ++  Y  LP
Subjt:  RHGLQTIVGYISLYKCLP

A0A7J7DGY7 Uncharacterized protein3.6e-1839.13Show/hide
Query:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDRHG
        ++ TG+++AHE +HAW R+QG+  +E  +EEGICQVIAY+WL WIE   S   S         ++ + L  ++K ++E  +  EYG GFR+   AV ++G
Subjt:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDRHG

Query:  LQTIVGYISLYKCLP
        L  ++ +I  +  LP
Subjt:  LQTIVGYISLYKCLP

B9HRS3 Uncharacterized protein2.1e-1841.88Show/hide
Query:  VKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEA---ESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDR
        V TG ++AHE +HAW R+QG+  +   +EEGICQV+ Y+WL+W EA   E+SSS S         +F++ L K++K ++E      YG GFR+ + AV R
Subjt:  VKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEA---ESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDR

Query:  HGLQTIVGYISLYKCLP
        +GL  ++ +I  +K LP
Subjt:  HGLQTIVGYISLYKCLP

SwissProt top hitse value%identityAlignment
P0C7Q8 Protein DA18.6e-1738.98Show/hide
Query:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNW--------IEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNV
        R+ TGS++AHE++HAW R++G   +   +EEGICQV+A++WL+           A SSSS S G   G   ++ +KL + +K  IE++A   YG GFR  
Subjt:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNW--------IEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNV

Query:  KAAVDRHGLQTIVGYISL
        + AV ++GL+  + +I +
Subjt:  KAAVDRHGLQTIVGYISL

Q0WSN2 Protein DA1-related 22.4e-1434.88Show/hide
Query:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWL--------------NWIEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYG
        R+ TG+++AHEL+H W R+ G   +   +EEGICQV++Y WL              +     +SSS S     GG     KKL + +K  I  +A   YG
Subjt:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWL--------------NWIEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYG

Query:  YGFRNVKAAVDRHGLQTIVGYISLYKCLP
         GFR   AA  ++GL+  + +I L    P
Subjt:  YGFRNVKAAVDRHGLQTIVGYISLYKCLP

Q84WJ0 Protein DA1-related 52.2e-1237.29Show/hide
Query:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWL---------NWIEAESSSSGS-------GGGGGGGGGEFVKKLIKSYKRDIETEACEE
        R+ TG ++AHE++HAW R+ G   +   LEEGICQV+ + WL            +A S+SS S            G   +F KKL++  K  IET+    
Subjt:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWL---------NWIEAESSSSGS-------GGGGGGGGGEFVKKLIKSYKRDIETEACEE

Query:  YGYGFRNVKAAVDRHGLQ
        YG GFR V   V    LQ
Subjt:  YGYGFRNVKAAVDRHGLQ

Q8W4F0 Protein DA1-related 13.0e-1738.89Show/hide
Query:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWL--------NWIEAESSSSG---SGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGF
        R+ TGS++AHE++HAW R+ G P +   +EEGICQV+A+ WL          ++  SSSS    S     G   +F KKL + +K  IE+++   YG GF
Subjt:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWL--------NWIEAESSSSG---SGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGF

Query:  RNVKAAVDRHGLQTIVGYISLYKCLP
        R    AV +HGL+  + +I L    P
Subjt:  RNVKAAVDRHGLQTIVGYISLYKCLP

Q9FJX9 Protein DA1-related 77.6e-1335.34Show/hide
Query:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEAESSSSGSGGGGG-----------GGGGEFVKKLIKSYKRDIETEACEEYGYGF
        R+ TG ++AHE++HAW R+ G   ++  LEEGICQV+ + WL      SS++ S                G   ++ KKL++  K  IET+    YG GF
Subjt:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEAESSSSGSGGGGG-----------GGGGEFVKKLIKSYKRDIETEACEEYGYGF

Query:  RNVKAAVDRHGLQTIV
        R V   V    L  I+
Subjt:  RNVKAAVDRHGLQTIV

Arabidopsis top hitse value%identityAlignment
AT1G19270.1 DA16.1e-1838.98Show/hide
Query:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNW--------IEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNV
        R+ TGS++AHE++HAW R++G   +   +EEGICQV+A++WL+           A SSSS S G   G   ++ +KL + +K  IE++A   YG GFR  
Subjt:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNW--------IEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNV

Query:  KAAVDRHGLQTIVGYISL
        + AV ++GL+  + +I +
Subjt:  KAAVDRHGLQTIVGYISL

AT2G39830.1 DA1-related protein 21.7e-1534.88Show/hide
Query:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWL--------------NWIEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYG
        R+ TG+++AHEL+H W R+ G   +   +EEGICQV++Y WL              +     +SSS S     GG     KKL + +K  I  +A   YG
Subjt:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWL--------------NWIEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYG

Query:  YGFRNVKAAVDRHGLQTIVGYISLYKCLP
         GFR   AA  ++GL+  + +I L    P
Subjt:  YGFRNVKAAVDRHGLQTIVGYISLYKCLP

AT4G36860.1 LIM domain-containing protein2.1e-1838.89Show/hide
Query:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWL--------NWIEAESSSSG---SGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGF
        R+ TGS++AHE++HAW R+ G P +   +EEGICQV+A+ WL          ++  SSSS    S     G   +F KKL + +K  IE+++   YG GF
Subjt:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWL--------NWIEAESSSSG---SGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGF

Query:  RNVKAAVDRHGLQTIVGYISLYKCLP
        R    AV +HGL+  + +I L    P
Subjt:  RNVKAAVDRHGLQTIVGYISLYKCLP

AT5G66610.1 DA1-related protein 75.4e-1435.34Show/hide
Query:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEAESSSSGSGGGGG-----------GGGGEFVKKLIKSYKRDIETEACEEYGYGF
        R+ TG ++AHE++HAW R+ G   ++  LEEGICQV+ + WL      SS++ S                G   ++ KKL++  K  IET+    YG GF
Subjt:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEAESSSSGSGGGGG-----------GGGGEFVKKLIKSYKRDIETEACEEYGYGF

Query:  RNVKAAVDRHGLQTIV
        R V   V    L  I+
Subjt:  RNVKAAVDRHGLQTIV

AT5G66630.1 DA1-related protein 51.6e-1337.29Show/hide
Query:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWL---------NWIEAESSSSGS-------GGGGGGGGGEFVKKLIKSYKRDIETEACEE
        R+ TG ++AHE++HAW R+ G   +   LEEGICQV+ + WL            +A S+SS S            G   +F KKL++  K  IET+    
Subjt:  RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWL---------NWIEAESSSSGS-------GGGGGGGGGEFVKKLIKSYKRDIETEACEE

Query:  YGYGFRNVKAAVDRHGLQ
        YG GFR V   V    LQ
Subjt:  YGYGFRNVKAAVDRHGLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGGTTAAAACTGGATCGCTCATGGCTCATGAGTTGCTGCATGCTTGGTTTAGAGTCCAAGGACTTCCATTAATGGAAGGACCCCTAGAGGAAGGTATTTGCCAAGTTAT
AGCTTACGAGTGGCTGAACTGGATTGAGGCGGAGAGCTCCAGCTCCGGCTCCGGCGGCGGCGGTGGCGGCGGCGGCGGCGAGTTTGTGAAGAAACTAATAAAGAGTTACA
AGCGGGATATTGAGACGGAGGCGTGCGAAGAGTACGGATATGGTTTTAGAAATGTTAAGGCGGCTGTGGACAGACATGGCCTTCAAACTATCGTTGGTTACATTTCTCTC
TATAAATGTCTCCCT
mRNA sequenceShow/hide mRNA sequence
AGGGTTAAAACTGGATCGCTCATGGCTCATGAGTTGCTGCATGCTTGGTTTAGAGTCCAAGGACTTCCATTAATGGAAGGACCCCTAGAGGAAGGTATTTGCCAAGTTAT
AGCTTACGAGTGGCTGAACTGGATTGAGGCGGAGAGCTCCAGCTCCGGCTCCGGCGGCGGCGGTGGCGGCGGCGGCGGCGAGTTTGTGAAGAAACTAATAAAGAGTTACA
AGCGGGATATTGAGACGGAGGCGTGCGAAGAGTACGGATATGGTTTTAGAAATGTTAAGGCGGCTGTGGACAGACATGGCCTTCAAACTATCGTTGGTTACATTTCTCTC
TATAAATGTCTCCCT
Protein sequenceShow/hide protein sequence
RVKTGSLMAHELLHAWFRVQGLPLMEGPLEEGICQVIAYEWLNWIEAESSSSGSGGGGGGGGGEFVKKLIKSYKRDIETEACEEYGYGFRNVKAAVDRHGLQTIVGYISL
YKCLP