; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022070 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022070
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSEL1-like repeat protein
Genome locationscaffold47:466393..467337
RNA-Seq ExpressionMS022070
SyntenyMS022070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_045454440.1 SEL1-like repeat protein [Vibrio campbellii]1.9e-1030.47Show/hide
Query:  DAKPQQNTRDLYWYGKDTKAQPSSRGLYWYGKDDAKPQPNTRDLYWYGDDVKTQPNTGDLYWYGKDTKPQPNARDLYWYSKD-----AKAQPNTRNLYWY
        DA+ Q N  ++Y  G D   Q   + +YWY K  A  Q   R           Q N G ++  G+   PQ + + +YWY K      A+AQ N   +Y  
Subjt:  DAKPQQNTRDLYWYGKDTKAQPSSRGLYWYGKDDAKPQPNTRDLYWYGDDVKTQPNTGDLYWYGKDTKPQPNARDLYWYSKD-----AKAQPNTRNLYWY

Query:  GKDAKTQQNTRDLYWYGKDTKAQASSRDLYWYGNDAKPQPNTRDLYWYGKDAKPQQNTRDLYWYGK-----DTKARASNRDLYWYGNDAKPQQNTRDLYW
        GK    Q +T+ +YWY K  + +            A+ Q N   +Y  GK   P  +T+ +YWYGK     D  A+++   +Y  G +  PQ +TR +YW
Subjt:  GKDAKTQQNTRDLYWYGKDTKAQASSRDLYWYGNDAKPQPNTRDLYWYGKDAKPQQNTRDLYWYGK-----DTKARASNRDLYWYGNDAKPQQNTRDLYW

Query:  YGKDTEVQPS--SRDLYWYGKDAK--PQQNTRDLYWYSKD-----TKAQPSSRDLYWYGNDAKPQQNTRDLYWYGEDAK
        Y K      S    +L W  +D K   Q +T+ +YWY K       KAQ +   +Y  G    PQ +T+ + WY + A+
Subjt:  YGKDTEVQPS--SRDLYWYGKDAK--PQQNTRDLYWYSKD-----TKAQPSSRDLYWYGNDAKPQQNTRDLYWYGEDAK

WP_086336060.1 SEL1-like repeat protein [Gilliamella apicola]8.4e-1128.27Show/hide
Query:  DAKTQPNTRDLYWYGKDAKPQPNIRDLYWYSKDAK-----PQQNTRDLYWYGKDTKAQPSSRGLYWYGK----DDAKPQPNTRDLYWYGDDVKTQPNTGD
        DA  Q     +Y  G+  K Q   + +YWY+K A+      Q N   +Y+   D K Q   + +YWY K    + ++ Q N   +Y  GD VK Q     
Subjt:  DAKTQPNTRDLYWYGKDAKPQPNIRDLYWYSKDAK-----PQQNTRDLYWYGKDTKAQPSSRGLYWYGK----DDAKPQPNTRDLYWYGDDVKTQPNTGD

Query:  LYWYGKDTKPQPNARDL----YWYSKDAKAQPNTRNLYWYGKDAK-----TQQNTRDLYWYGKDTKAQASSRDLYWYGNDAK-----PQPNTRDLYWYGK
        +YWY K  +   ++  L     +Y  D   Q   +  YWY K A+     +Q N   +Y+ G   K Q   + +YWY   A+      Q N   +Y  G 
Subjt:  LYWYGKDTKPQPNARDL----YWYSKDAKAQPNTRNLYWYGKDAK-----TQQNTRDLYWYGKDTKAQASSRDLYWYGNDAK-----PQPNTRDLYWYGK

Query:  DAKPQQNTRDLYWYGKDTKARASNRD-----LYWYGNDAKPQQNTRDLYWYGKDTEVQPSSRD----LYWYGKDAKPQQNTRDLYWYSK-----DTKAQP
          K Q   + +YW+ K  +   SN       +Y  G+  K Q   + +Y Y K  +   SS      L +Y  D   Q   R +YW++K     D+KAQ 
Subjt:  DAKPQQNTRDLYWYGKDTKARASNRD-----LYWYGNDAKPQQNTRDLYWYGKDTEVQPSSRD----LYWYGKDAKPQQNTRDLYWYSK-----DTKAQP

Query:  SSRDLYWYGNDAKPQQNTRDLYWYGEDAK
        +   +Y  G   K Q   + +YWY + A+
Subjt:  SSRDLYWYGNDAKPQQNTRDLYWYGEDAK

WP_103411471.1 SEL1-like repeat protein [Vibrio campbellii]8.1e-1429.97Show/hide
Query:  DAKPQPNIRDLYWYSKDAKPQQNTRDLYWYGKDTKA--QPSSRGLYWYGKDD-AKPQPNTRDLYWYGDD-----VKTQPNTGDLYWYGKDTKPQPNARDL
        DA+ Q N+ ++Y    D   Q + + +YWY K  +     +   L W  K     PQ +T+ +YWY         + Q N G +Y  GK   PQ + + +
Subjt:  DAKPQPNIRDLYWYSKDAKPQQNTRDLYWYGKDTKA--QPSSRGLYWYGKDD-AKPQPNTRDLYWYGDD-----VKTQPNTGDLYWYGKDTKPQPNARDL

Query:  YWYSKD-----AKAQPNTRNLYWYGKDAKTQQNTRDLYWYGKDTKAQASSRDLYWYGNDAKPQPNTRDLYWYGKDAKPQQNTRDLYWYGK--DTKARASN
        YWY K      A+ Q N  ++Y  GK      +T+ +YWYGK ++             DA  Q N   +Y  G +  PQ +TR +YWY K  D       
Subjt:  YWYSKD-----AKAQPNTRNLYWYGKDAKTQQNTRDLYWYGKDTKAQASSRDLYWYGNDAKPQPNTRDLYWYGKDAKPQQNTRDLYWYGK--DTKARASN

Query:  RDLYWYGNDAK--PQQNTRDLYWYGKDTE--VQPSSRDLYWYGKDAK--PQQNTRDLYWYSKD-----TKAQPSSRDLYWYGNDAKPQQNTRDLYWY
         +L W   D K   Q +T+ +YWY K  E     +  +L W  K  +  PQ +T+ + WY K       +AQ +   +Y  G  A PQ +T+ ++WY
Subjt:  RDLYWYGNDAK--PQQNTRDLYWYGKDTE--VQPSSRDLYWYGKDAK--PQQNTRDLYWYSKD-----TKAQPSSRDLYWYGNDAKPQQNTRDLYWY

WP_171370397.1 SEL1-like repeat protein [Vibrio owensii]1.4e-1030.11Show/hide
Query:  DAKPQQNTRDLYWYGKDTKAQPSSRGLYWYGKDDAKPQPNTRDLYWYGDDVKTQPNTGDLYWYGKDTKPQPNARDLYWYSKD-----AKAQPNTRNLYWY
        DA+ Q N  ++Y  G D   Q   + +YWY K  A  Q   R           Q N G ++  G+   PQ + + +YWY K      A+AQ N   +Y  
Subjt:  DAKPQQNTRDLYWYGKDTKAQPSSRGLYWYGKDDAKPQPNTRDLYWYGDDVKTQPNTGDLYWYGKDTKPQPNARDLYWYSKD-----AKAQPNTRNLYWY

Query:  GKDAKTQQNTRDLYWYGKDTKAQASSRDLYWYGNDAKPQPNTRDLYWYGKDAKPQQNTRDLYWYGK-----DTKARASNRDLYWYGNDAKPQQNTRDLYW
        GK    Q +T+ +YWY K  + +            A+ Q N   +Y  GK   P  +T+ +YWYGK     D  A+++   +Y  G +  PQ +TR +YW
Subjt:  GKDAKTQQNTRDLYWYGKDTKAQASSRDLYWYGNDAKPQPNTRDLYWYGKDAKPQQNTRDLYWYGK-----DTKARASNRDLYWYGNDAKPQQNTRDLYW

Query:  YGKDT--EVQPSSRDLYWYGKDAK--PQQNTRDLYWYSKD-----TKAQPSSRDLYWYGNDAKPQQNTRDLYWYGEDAK
        Y K     +     +L W  +D K   Q +T+ +YWY K       KAQ +   +Y  G    PQ +T+ + WY + A+
Subjt:  YGKDT--EVQPSSRDLYWYGKDAK--PQQNTRDLYWYSKD-----TKAQPSSRDLYWYGNDAKPQQNTRDLYWYGEDAK

XP_022135997.1 BURP domain-containing protein BNM2C-like [Momordica charantia]2.8e-4660.13Show/hide
Query:  DDAKPQPNTRDLYWYGDDVKTQPNTGDLYWYGKDTKPQPNARDLYWYSKDAKAQPNTRNLYWYGKDAKTQQNTRDLYWYGKDTKAQASSRDLYWYGNDAK
        +D KPQPNTRDLYWYGD+VK+QPN  DLYWYG                 D K QPNTR+LYWYGKDAK Q N R+LYWYGK+ K Q S+RDLYWYG DAK
Subjt:  DDAKPQPNTRDLYWYGDDVKTQPNTGDLYWYGKDTKPQPNARDLYWYSKDAKAQPNTRNLYWYGKDAKTQQNTRDLYWYGKDTKAQASSRDLYWYGNDAK

Query:  PQPNTRDLYWYGKDAKPQQNTRDLYWYGKDTKARASNRDLY-WYGNDAKPQQNTRDLY
        PQPNTRDLYWYGKD KPQ N RDLYWY KD K +      +    N++  +Q+  D Y
Subjt:  PQPNTRDLYWYGKDAKPQQNTRDLYWYGKDTKARASNRDLY-WYGNDAKPQQNTRDLY

TrEMBL top hitse value%identityAlignment
A0A080KFV7 TPR repeat, SEL1 subfamily protein1.3e-0930Show/hide
Query:  DVKPQPSNHNLYWYGKDAKTQPNTRDLYWYGKDAK-----PQPNIRDLYWYSKDAKPQQNTRDLYWYGKDTKAQPS---SRGLYWYGKDDAKPQPNTRDL
        D + Q +    Y++G D   Q   +  YW+ K A+      Q N+  +Y   +D K Q   +  YWY K  +   S   +   Y +   +   Q   +  
Subjt:  DVKPQPSNHNLYWYGKDAKTQPNTRDLYWYGKDAK-----PQPNIRDLYWYSKDAKPQQNTRDLYWYGKDTKAQPS---SRGLYWYGKDDAKPQPNTRDL

Query:  YWY------GDDVKTQPNTGDLYWYGKDTKPQPNARDLYWYSK-----DAKAQPNTRNLYWYGKDAKTQQNTRDLYWYGK-----DTKAQASSRDLYWYG
        YWY      G  +  + N GD Y+YG+D K Q   +  YWY+K     D  AQ N  + Y+YG+D K Q   + LYWY K     +  AQ     +Y  G
Subjt:  YWY------GDDVKTQPNTGDLYWYGKDTKPQPNARDLYWYSK-----DAKAQPNTRNLYWYGKDAKTQQNTRDLYWYGK-----DTKAQASSRDLYWYG

Query:  NDAKPQPNTRDLYWYGKDAK
         D K +   + +YWY K A+
Subjt:  NDAKPQPNTRDLYWYGKDAK

A0A2I8XJP3 Cobalamin biosynthesis protein CobT3.9e-1429.97Show/hide
Query:  DAKPQPNIRDLYWYSKDAKPQQNTRDLYWYGKDTKA--QPSSRGLYWYGKDD-AKPQPNTRDLYWYGDD-----VKTQPNTGDLYWYGKDTKPQPNARDL
        DA+ Q N+ ++Y    D   Q + + +YWY K  +     +   L W  K     PQ +T+ +YWY         + Q N G +Y  GK   PQ + + +
Subjt:  DAKPQPNIRDLYWYSKDAKPQQNTRDLYWYGKDTKA--QPSSRGLYWYGKDD-AKPQPNTRDLYWYGDD-----VKTQPNTGDLYWYGKDTKPQPNARDL

Query:  YWYSKD-----AKAQPNTRNLYWYGKDAKTQQNTRDLYWYGKDTKAQASSRDLYWYGNDAKPQPNTRDLYWYGKDAKPQQNTRDLYWYGK--DTKARASN
        YWY K      A+ Q N  ++Y  GK      +T+ +YWYGK ++             DA  Q N   +Y  G +  PQ +TR +YWY K  D       
Subjt:  YWYSKD-----AKAQPNTRNLYWYGKDAKTQQNTRDLYWYGKDTKAQASSRDLYWYGNDAKPQPNTRDLYWYGKDAKPQQNTRDLYWYGK--DTKARASN

Query:  RDLYWYGNDAK--PQQNTRDLYWYGKDTE--VQPSSRDLYWYGKDAK--PQQNTRDLYWYSKD-----TKAQPSSRDLYWYGNDAKPQQNTRDLYWY
         +L W   D K   Q +T+ +YWY K  E     +  +L W  K  +  PQ +T+ + WY K       +AQ +   +Y  G  A PQ +T+ ++WY
Subjt:  RDLYWYGNDAK--PQQNTRDLYWYGKDTE--VQPSSRDLYWYGKDAK--PQQNTRDLYWYSKD-----TKAQPSSRDLYWYGNDAKPQQNTRDLYWY

A0A6J1C4C0 BURP domain-containing protein BNM2C-like1.3e-4660.13Show/hide
Query:  DDAKPQPNTRDLYWYGDDVKTQPNTGDLYWYGKDTKPQPNARDLYWYSKDAKAQPNTRNLYWYGKDAKTQQNTRDLYWYGKDTKAQASSRDLYWYGNDAK
        +D KPQPNTRDLYWYGD+VK+QPN  DLYWYG                 D K QPNTR+LYWYGKDAK Q N R+LYWYGK+ K Q S+RDLYWYG DAK
Subjt:  DDAKPQPNTRDLYWYGDDVKTQPNTGDLYWYGKDTKPQPNARDLYWYSKDAKAQPNTRNLYWYGKDAKTQQNTRDLYWYGKDTKAQASSRDLYWYGNDAK

Query:  PQPNTRDLYWYGKDAKPQQNTRDLYWYGKDTKARASNRDLY-WYGNDAKPQQNTRDLY
        PQPNTRDLYWYGKD KPQ N RDLYWY KD K +      +    N++  +Q+  D Y
Subjt:  PQPNTRDLYWYGKDAKPQQNTRDLYWYGKDTKARASNRDLY-WYGNDAKPQQNTRDLY

A0A7Y4LMG1 SEL1-like repeat protein1.7e-0931.25Show/hide
Query:  DAKPQPNTRDLYWYGDDVKTQPNTGDLYWYGKDTKPQPNAR---DLYWYSKDAKA--QPNTRNLYWYGKD-----AKTQQNTRDLYWYGKDTKAQASSRD
        DA+ Q N  ++Y  GD +  Q +   +YWY K  + Q  AR    L W  K  +   Q +T+ +YWY K      A+ Q N   +Y  GK    Q  ++ 
Subjt:  DAKPQPNTRDLYWYGDDVKTQPNTGDLYWYGKDTKPQPNAR---DLYWYSKDAKA--QPNTRNLYWYGKD-----AKTQQNTRDLYWYGKDTKAQASSRD

Query:  LYWYGND-----AKPQPNTRDLYWYGKDAKPQQNTRDLYWYGK-----DTKARASNRDLYWYGNDAKPQQNTRDLYWYGKDTEV--QPSSRDLYWYGKDA
        +YWY        A+ Q N   +Y  GK   P  +T+ +YWYGK     D  A+++   +Y  G +  PQ +TR +YWY K           +L W  +D 
Subjt:  LYWYGND-----AKPQPNTRDLYWYGKDAKPQQNTRDLYWYGK-----DTKARASNRDLYWYGNDAKPQQNTRDLYWYGKDTEV--QPSSRDLYWYGKDA

Query:  K--PQQNTRDLYWYSKD-----TKAQPSSRDLYWYGNDAKPQQNTRDLYWYGEDAK
        K   Q +T+ +YWY K       KAQ +   +Y  G    PQ +T+ + WY + A+
Subjt:  K--PQQNTRDLYWYSKD-----TKAQPSSRDLYWYGNDAKPQQNTRDLYWYGEDAK

X2H0V4 Uncharacterized protein5.9e-1027.32Show/hide
Query:  YWYGKDVKPQPSNHNLYWYGKDAK-----TQPNTRDLYWYGKDAKPQPNIRDLYWYSKDA-----KPQQNTRDLYWYGKDTKAQPSSRGLYWYGKDD---
        Y  G+ VK Q     +YWY K A+      Q N   +Y+   D K Q   + +YWY+K A     K Q N   +Y  G+  K Q   + +YWY K     
Subjt:  YWYGKDVKPQPSNHNLYWYGKDAK-----TQPNTRDLYWYGKDAKPQPNIRDLYWYSKDA-----KPQQNTRDLYWYGKDTKAQPSSRGLYWYGKDD---

Query:  -AKPQPNTRDLYWYGDDVKTQPNTGDLYWYGKDTK-----PQPNARDLYWYSKDAKAQPNTRNLYWYGKDAK-----TQQNTRDLYWYGKDTKAQASSRD
         +  Q N   +Y+ GD +  Q      YWY K  +      Q N   +Y Y  D   Q   + +YWY K A+      Q N   +Y  G   K Q   + 
Subjt:  -AKPQPNTRDLYWYGDDVKTQPNTGDLYWYGKDTK-----PQPNARDLYWYSKDAKAQPNTRNLYWYGKDAK-----TQQNTRDLYWYGKDTKAQASSRD

Query:  LYWYGND-----AKPQPNTRDLYWYGKDAKPQQNTRDLYWYGKDTKARAS----NRDLYWYGNDAKPQQNTRDLYWYGK-----DTEVQPSSRDLYWYGK
        +YW+        +  Q N   +Y  G D   Q   + +Y Y K  +   S    N  L +Y  D   Q   R +YW+ K     D++ Q +   +Y  G+
Subjt:  LYWYGND-----AKPQPNTRDLYWYGKDAKPQQNTRDLYWYGKDTKARAS----NRDLYWYGNDAKPQQNTRDLYWYGK-----DTEVQPSSRDLYWYGK

Query:  DAKPQQNTRDLYWYSKDTKAQPSSRDL---YWYGNDAK-PQQNTRDLYWYGEDAK
          K Q   + +YWY+K  +   +S        YG D    Q   +  +W+ + A+
Subjt:  DAKPQQNTRDLYWYSKDTKAQPSSRDL---YWYGNDAK-PQQNTRDLYWYGEDAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACTGGTATGGTAAGGATGTGAAGCCTCAACCAAGCAACCATAACCTCTACTGGTATGGTAAGGATGCAAAGACTCAACCAAACACCCGCGACCTCTACTGGTATGGTAA
GGATGCAAAGCCTCAACCAAACATCCGCGACCTCTACTGGTATAGTAAGGATGCAAAGCCTCAACAAAACACTCGCGACCTCTATTGGTATGGTAAGGATACAAAGGCTC
AACCAAGCAGTCGCGGCCTCTACTGGTATGGTAAGGACGATGCAAAGCCTCAACCAAACACCCGCGACCTCTATTGGTATGGTGACGATGTAAAGACCCAACCAAACACT
GGCGATCTCTATTGGTATGGTAAGGATACAAAGCCTCAACCAAATGCCCGTGATCTCTATTGGTATAGTAAGGATGCAAAGGCTCAACCAAACACCCGCAACCTCTATTG
GTATGGTAAGGATGCAAAGACTCAACAAAACACTCGCGACCTCTATTGGTATGGTAAAGATACAAAGGCTCAAGCAAGCAGTCGTGACCTCTATTGGTACGGTAATGATG
CAAAGCCTCAACCAAACACTCGCGATCTCTACTGGTATGGTAAGGATGCAAAGCCTCAACAAAACACTCGCGACCTCTATTGGTATGGTAAAGATACAAAGGCTCGAGCA
AGCAATCGTGACCTCTATTGGTACGGTAATGATGCAAAGCCTCAACAAAACACTCGCGACCTCTACTGGTATGGTAAGGATACAGAGGTTCAACCAAGCAGTCGTGACCT
CTATTGGTATGGCAAGGATGCAAAGCCTCAACAAAACACTCGCGACCTTTATTGGTACAGTAAGGATACAAAGGCTCAACCAAGTAGTCGTGATCTCTACTGGTATGGCA
ATGATGCGAAGCCTCAACAAAACACTCGCGACCTCTACTGGTATGGTGAGGATGCAAAGCCAACC
mRNA sequenceShow/hide mRNA sequence
TACTGGTATGGTAAGGATGTGAAGCCTCAACCAAGCAACCATAACCTCTACTGGTATGGTAAGGATGCAAAGACTCAACCAAACACCCGCGACCTCTACTGGTATGGTAA
GGATGCAAAGCCTCAACCAAACATCCGCGACCTCTACTGGTATAGTAAGGATGCAAAGCCTCAACAAAACACTCGCGACCTCTATTGGTATGGTAAGGATACAAAGGCTC
AACCAAGCAGTCGCGGCCTCTACTGGTATGGTAAGGACGATGCAAAGCCTCAACCAAACACCCGCGACCTCTATTGGTATGGTGACGATGTAAAGACCCAACCAAACACT
GGCGATCTCTATTGGTATGGTAAGGATACAAAGCCTCAACCAAATGCCCGTGATCTCTATTGGTATAGTAAGGATGCAAAGGCTCAACCAAACACCCGCAACCTCTATTG
GTATGGTAAGGATGCAAAGACTCAACAAAACACTCGCGACCTCTATTGGTATGGTAAAGATACAAAGGCTCAAGCAAGCAGTCGTGACCTCTATTGGTACGGTAATGATG
CAAAGCCTCAACCAAACACTCGCGATCTCTACTGGTATGGTAAGGATGCAAAGCCTCAACAAAACACTCGCGACCTCTATTGGTATGGTAAAGATACAAAGGCTCGAGCA
AGCAATCGTGACCTCTATTGGTACGGTAATGATGCAAAGCCTCAACAAAACACTCGCGACCTCTACTGGTATGGTAAGGATACAGAGGTTCAACCAAGCAGTCGTGACCT
CTATTGGTATGGCAAGGATGCAAAGCCTCAACAAAACACTCGCGACCTTTATTGGTACAGTAAGGATACAAAGGCTCAACCAAGTAGTCGTGATCTCTACTGGTATGGCA
ATGATGCGAAGCCTCAACAAAACACTCGCGACCTCTACTGGTATGGTGAGGATGCAAAGCCAACC
Protein sequenceShow/hide protein sequence
YWYGKDVKPQPSNHNLYWYGKDAKTQPNTRDLYWYGKDAKPQPNIRDLYWYSKDAKPQQNTRDLYWYGKDTKAQPSSRGLYWYGKDDAKPQPNTRDLYWYGDDVKTQPNT
GDLYWYGKDTKPQPNARDLYWYSKDAKAQPNTRNLYWYGKDAKTQQNTRDLYWYGKDTKAQASSRDLYWYGNDAKPQPNTRDLYWYGKDAKPQQNTRDLYWYGKDTKARA
SNRDLYWYGNDAKPQQNTRDLYWYGKDTEVQPSSRDLYWYGKDAKPQQNTRDLYWYSKDTKAQPSSRDLYWYGNDAKPQQNTRDLYWYGEDAKPT