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MS022073 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022073
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionorgan-specific protein S2-like isoform X2
Genome locationscaffold47:528078..528740
RNA-Seq ExpressionMS022073
SyntenyMS022073
Gene Ontology termsNA
InterPro domainsIPR024489 - Organ specific protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646137.1 hypothetical protein Csa_016549 [Cucumis sativus]6.2e-6157.51Show/hide
Query:  SSIESRYE---HWRKVMEDEPLPA----KKDCLDHTQLENKKSFVRDIEPRPSVMFYPDD-VKIKFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPRPSV
        + IESR+E    W+ V+ED+ LP     K+DC  +  L+N+ +F  DI+PRPS+ FYP+D  K K F KDIEP P+AT YP+      F  KD+EPRPS+
Subjt:  SSIESRYE---HWRKVMEDEPLPA----KKDCLDHTQLENKKSFVRDIEPRPSVMFYPDD-VKIKFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPRPSV

Query:  TFYPNDE-KIKFVVKDIEPRPSVTFYP-DDIKTEHFDKDIEPQPSATFYPN-DVKTKLFIKDIESRPIFTFYPND-VKTKLFVKDIDQPRPSAAFYPN-D
        TFYPND+ K K   KDIEPRPS TFYP D+ K + F KDIEP+PSATFYPN D K KLF KDIE RP  TFYPND  K + F KDI +PRPSA FYPN D
Subjt:  TFYPNDE-KIKFVVKDIEPRPSVTFYP-DDIKTEHFDKDIEPQPSATFYPN-DVKTKLFIKDIESRPIFTFYPND-VKTKLFVKDIDQPRPSAAFYPN-D

Query:  VKTKLFIQDKETRPTTTLYPN-DVKTKFFIHDI
         K KLF +D E RP+ T YPN D   KFF  DI
Subjt:  VKTKLFIQDKETRPTTTLYPN-DVKTKFFIHDI

XP_022135727.1 uncharacterized protein LOC111007618 [Momordica charantia]3.7e-6662.61Show/hide
Query:  LVSSIESRYE---HWRKVMEDEPLP----AKKDCLD-HTQLENKKSFVRDIEPRPSVMFYPDDVKI-KFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPR
        LVS IESRYE   HWR  MED+PLP     K+DCL+ HT+LEN+KSFV+DIEPRPS+ FYP++ K    F+ DIEP  +AT YPD VKTK F  +D++PR
Subjt:  LVSSIESRYE---HWRKVMEDEPLP----AKKDCLD-HTQLENKKSFVRDIEPRPSVMFYPDDVKI-KFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPR

Query:  PSVTFYPNDEKIKFVVKDIEPRPSVTFYPDDIKTEHFDKDIEPQPSATFYPNDVKTKLFIKDIESRPIFTFYPNDVKTKLFVKDIDQPRPSAAFYPNDVK
        PSVT YPND     + +DIEPRPSVTFYPDD+K + F KDI+P+PS TFYPNDVK +L  K IE RP  TFYP+DVK KLF KDID PRPS  FYPNDVK
Subjt:  PSVTFYPNDEKIKFVVKDIEPRPSVTFYPDDIKTEHFDKDIEPQPSATFYPNDVKTKLFIKDIESRPIFTFYPNDVKTKLFVKDIDQPRPSAAFYPNDVK

Query:  TKLFIQDKETRPTTTLYPNDVK
         +L  +  E RP+TT YP+DV+
Subjt:  TKLFIQDKETRPTTTLYPNDVK

XP_022952150.1 uncharacterized protein LOC111454914 isoform X1 [Cucurbita moschata]4.7e-6148.68Show/hide
Query:  LVSSIESRYE----HWRKVMEDEPLPAK------------------KDCLDHTQLENKKSFVR----------------------DIEPRPSVMFYPDDV
        L ++IESRYE    HWR  ++D+ L  K                  +DC    +LE+ K FV+                      DI+PRPS  FYPDD 
Subjt:  LVSSIESRYE----HWRKVMEDEPLPAK------------------KDCLDHTQLENKKSFVR----------------------DIEPRPSVMFYPDDV

Query:  KIKFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPRPSVTFYPNDEKIKFVVKDIEPRPSVTFYPDDIKTEHFDKDIEPQPSATFYPNDVKTKLFIKDIES
        K KF  +DIEP P  + YPD+VKTK F  KD+EPRPS +FYP+D K KF+ +DIEPRP+++FYPD +KT+ F KDIEP+PSA+FYP+D K K   +DIE 
Subjt:  KIKFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPRPSVTFYPNDEKIKFVVKDIEPRPSVTFYPDDIKTEHFDKDIEPQPSATFYPNDVKTKLFIKDIES

Query:  RPIFTFYPNDVKTKLFVKDIDQPRPSAAFYPNDVKTKLFIQDKETRPTTTLYPNDVKTKFFIHDI
        RP  +FYP+ VKTKLF KDI +PRPSA+FYP+D K K   +D E RP  + YP+ VKTK F  DI
Subjt:  RPIFTFYPNDVKTKLFVKDIDQPRPSAAFYPNDVKTKLFIQDKETRPTTTLYPNDVKTKFFIHDI

XP_031745285.1 proteoglycan 4 isoform X2 [Cucumis sativus]2.8e-6157.94Show/hide
Query:  SSIESRYE---HWRKVMEDEPLPA----KKDCLDHTQLENKKSFVRDIEPRPSVMFYPDD-VKIKFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPRPSV
        + IESR+E    W+ V+ED+ LP     K+DC  +  L+N+ +F  DI+PRPS+ FYP+D  K K F KDIEP P+AT YP+      F  KD+EPRPS+
Subjt:  SSIESRYE---HWRKVMEDEPLPA----KKDCLDHTQLENKKSFVRDIEPRPSVMFYPDD-VKIKFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPRPSV

Query:  TFYPNDE-KIKFVVKDIEPRPSVTFYP-DDIKTEHFDKDIEPQPSATFYPN-DVKTKLFIKDIESRPIFTFYPND-VKTKLFVKDIDQPRPSAAFYPN-D
        TFYPND+ K K   KDIEPRPS TFYP D+ K + F KDIEP+PSATFYPN D K KLF KDIE RP  TFYPND  K + F KDI +PRPS  FYPN D
Subjt:  TFYPNDE-KIKFVVKDIEPRPSVTFYP-DDIKTEHFDKDIEPQPSATFYPN-DVKTKLFIKDIESRPIFTFYPND-VKTKLFVKDIDQPRPSAAFYPN-D

Query:  VKTKLFIQDKETRPTTTLYPND-VKTKFFIHDI
         K KLF +D E RP+ T YPND  K KFFI DI
Subjt:  VKTKLFIQDKETRPTTTLYPND-VKTKFFIHDI

XP_038887162.1 uncharacterized protein LOC120077350 [Benincasa hispida]2.3e-7161.84Show/hide
Query:  LVSSIESRYE---HWRKVMEDEPLPA----KKDCLDHTQLENKKSFVRDIEPRPSVMFYPDDVKIKFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPRPS
        LVSSIESRYE    WR V+EDE        K+DCL+  ++ N++SF++DIEPRPSV FYPDD K+K F KDIEP P+ T YP  V  K F  KD+EPRPS
Subjt:  LVSSIESRYE---HWRKVMEDEPLPA----KKDCLDHTQLENKKSFVRDIEPRPSVMFYPDDVKIKFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPRPS

Query:  VTFYPNDEKIKFVVKDIEPRPSVTFYPDDIKTEHFDKDIEPQPSATFYPNDVKTKLFIKDIESRPIFTFYPNDVKTKLFVKDIDQPRPSAAFYPNDVKTK
         TFYPND KI F  K+IEPRPSVTFYP+D K   F KDIEP+PS TFYP DVK + F KDIE RP  TFYP DVK  LF KDI +PRPS  FYP+DVK K
Subjt:  VTFYPNDEKIKFVVKDIEPRPSVTFYPDDIKTEHFDKDIEPQPSATFYPNDVKTKLFIKDIESRPIFTFYPNDVKTKLFVKDIDQPRPSAAFYPNDVKTK

Query:  LFIQDKETRPTTTLYPNDVKTKFFIHDI
        LF ++ E RP  T YPND K K F  DI
Subjt:  LFIQDKETRPTTTLYPNDVKTKFFIHDI

TrEMBL top hitse value%identityAlignment
A0A0A0K3R4 Uncharacterized protein1.9e-6358.8Show/hide
Query:  SSIESRYE---HWRKVMEDEPLPA----KKDCLDHTQLENKKSFVRDIEPRPSVMFYP-DDVKIKFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPRPSV
        + IESRYE    W+ V+ED+ LP     K+DC  +  L+N+ +F  D +PRPS+ FYP D+ K +FF KDIEP P+AT YP+      F  KD+EPRPS 
Subjt:  SSIESRYE---HWRKVMEDEPLPA----KKDCLDHTQLENKKSFVRDIEPRPSVMFYP-DDVKIKFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPRPSV

Query:  TFYPNDE-KIKFVVKDIEPRPSVTFYP-DDIKTEHFDKDIEPQPSATFYPN-DVKTKLFIKDIESRPIFTFYPN-DVKTKLFVKDIDQPRPSAAFYPN-D
        TFYPND+ K K   KDIEPRPS TFYP DD K + F KDIEP+PSATFYPN D K KLF KDIE RP  TFYPN D K KLF KDI +PRPSA FYPN D
Subjt:  TFYPNDE-KIKFVVKDIEPRPSVTFYP-DDIKTEHFDKDIEPQPSATFYPN-DVKTKLFIKDIESRPIFTFYPN-DVKTKLFVKDIDQPRPSAAFYPN-D

Query:  VKTKLFIQDKETRPTTTLYPN-DVKTKFFIHDI
         K KLF +D E RP+ T YPN D K K F  DI
Subjt:  VKTKLFIQDKETRPTTTLYPN-DVKTKFFIHDI

A0A0A0K958 Uncharacterized protein3.9e-6158.12Show/hide
Query:  SSIESRYE---HWRKVMEDEPLPA----KKDCLDHTQLENKKSFVRDIEPRPSVMFYPDD-VKIKFFMKDIEPPPTATLYP-DIVKTKFFVKKDVEPRPS
        + IESRYE    W+ V+ED+ LP     K+DC  +  L+N+ +F  DI+PRPS+ FYP+D  K KFF+KDIEP P+ T YP D  K K F  KD+EPRPS
Subjt:  SSIESRYE---HWRKVMEDEPLPA----KKDCLDHTQLENKKSFVRDIEPRPSVMFYPDD-VKIKFFMKDIEPPPTATLYP-DIVKTKFFVKKDVEPRPS

Query:  VTFYPNDE-KIKFVVKDIEPRPSVTFYP-DDIKTEHFDKDIEPQPSATFYPN-DVKTKLFIKDIESRPIFTFYPND-VKTKLFVKDIDQPRPSAAFYPND
        +TFYPND+ K K   KDIEPRPS+TFYP DD K + F KDIEP+PS TFYPN D K KLF KDIE RP  TFYPND  K K F+KDI +PRPS  FYPND
Subjt:  VTFYPNDE-KIKFVVKDIEPRPSVTFYP-DDIKTEHFDKDIEPQPSATFYPN-DVKTKLFIKDIESRPIFTFYPND-VKTKLFVKDIDQPRPSAAFYPND

Query:  -VKTKLFIQDKETRPTTTLYP-NDVKTKFFIHDI
          K K+FI+D E RP+ T YP N+ K K F  +I
Subjt:  -VKTKLFIQDKETRPTTTLYP-NDVKTKFFIHDI

A0A6J1C3J9 uncharacterized protein LOC1110076181.8e-6662.61Show/hide
Query:  LVSSIESRYE---HWRKVMEDEPLP----AKKDCLD-HTQLENKKSFVRDIEPRPSVMFYPDDVKI-KFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPR
        LVS IESRYE   HWR  MED+PLP     K+DCL+ HT+LEN+KSFV+DIEPRPS+ FYP++ K    F+ DIEP  +AT YPD VKTK F  +D++PR
Subjt:  LVSSIESRYE---HWRKVMEDEPLP----AKKDCLD-HTQLENKKSFVRDIEPRPSVMFYPDDVKI-KFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPR

Query:  PSVTFYPNDEKIKFVVKDIEPRPSVTFYPDDIKTEHFDKDIEPQPSATFYPNDVKTKLFIKDIESRPIFTFYPNDVKTKLFVKDIDQPRPSAAFYPNDVK
        PSVT YPND     + +DIEPRPSVTFYPDD+K + F KDI+P+PS TFYPNDVK +L  K IE RP  TFYP+DVK KLF KDID PRPS  FYPNDVK
Subjt:  PSVTFYPNDEKIKFVVKDIEPRPSVTFYPDDIKTEHFDKDIEPQPSATFYPNDVKTKLFIKDIESRPIFTFYPNDVKTKLFVKDIDQPRPSAAFYPNDVK

Query:  TKLFIQDKETRPTTTLYPNDVK
         +L  +  E RP+TT YP+DV+
Subjt:  TKLFIQDKETRPTTTLYPNDVK

A0A6J1EI09 uncharacterized protein LOC111433582 isoform X11.4e-5858.85Show/hide
Query:  VSSIESRYEHWRKVMEDEPLPAKKDCLDHTQLENKKSFVRDIEPRPSVMFYPDDVKIKFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPRPSVTFYPNDE
        V++IESR+E  +++   E    K+D ++  Q EN+K FV+DIEPRPS  FYP + + K F KDIEP P+AT YP+         KD+EPRPS TFYPN+ 
Subjt:  VSSIESRYEHWRKVMEDEPLPAKKDCLDHTQLENKKSFVRDIEPRPSVMFYPDDVKIKFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPRPSVTFYPNDE

Query:  -KIKFVVKDIEPRPSVTFYP-DDIKTEHFDKDIEPQPSATFYPND-VKTKLFIKDIESRPIFTFYPND-VKTKLFVKDIDQPRPSAAFYPND-VKTKLFI
         K     KDIEPRPS TFYP D++KT  FDKDIEP+PSATFYPND VKT +F KDIE RP  TFYPND VKT LF KDI +PRPSA FYP D VKT LF 
Subjt:  -KIKFVVKDIEPRPSVTFYP-DDIKTEHFDKDIEPQPSATFYPND-VKTKLFIKDIESRPIFTFYPND-VKTKLFVKDIDQPRPSAAFYPND-VKTKLFI

Query:  QDKETRPTTTLYPND-VKTKFFIHDI
        +D E RP+ + YPND VKT  F  DI
Subjt:  QDKETRPTTTLYPND-VKTKFFIHDI

A0A6J1GKY7 uncharacterized protein LOC111454914 isoform X12.3e-6148.68Show/hide
Query:  LVSSIESRYE----HWRKVMEDEPLPAK------------------KDCLDHTQLENKKSFVR----------------------DIEPRPSVMFYPDDV
        L ++IESRYE    HWR  ++D+ L  K                  +DC    +LE+ K FV+                      DI+PRPS  FYPDD 
Subjt:  LVSSIESRYE----HWRKVMEDEPLPAK------------------KDCLDHTQLENKKSFVR----------------------DIEPRPSVMFYPDDV

Query:  KIKFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPRPSVTFYPNDEKIKFVVKDIEPRPSVTFYPDDIKTEHFDKDIEPQPSATFYPNDVKTKLFIKDIES
        K KF  +DIEP P  + YPD+VKTK F  KD+EPRPS +FYP+D K KF+ +DIEPRP+++FYPD +KT+ F KDIEP+PSA+FYP+D K K   +DIE 
Subjt:  KIKFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPRPSVTFYPNDEKIKFVVKDIEPRPSVTFYPDDIKTEHFDKDIEPQPSATFYPNDVKTKLFIKDIES

Query:  RPIFTFYPNDVKTKLFVKDIDQPRPSAAFYPNDVKTKLFIQDKETRPTTTLYPNDVKTKFFIHDI
        RP  +FYP+ VKTKLF KDI +PRPSA+FYP+D K K   +D E RP  + YP+ VKTK F  DI
Subjt:  RPIFTFYPNDVKTKLFVKDIDQPRPSAAFYPNDVKTKLFIQDKETRPTTTLYPNDVKTKFFIHDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTGTCAGCAGCATAGAATCAAGATATGAACACTGGAGAAAGGTGATGGAAGATGAGCCATTACCAGCGAAGAAAGATTGCCTTGATCATACACAGCTTGAAAATAAAAA
GTCTTTTGTTAGGGATATCGAGCCACGGCCGAGTGTCATGTTTTATCCCGATGACGTCAAAATAAAGTTTTTCATGAAAGATATAGAACCACCACCAACTGCCACGCTTT
ATCCCGATATTGTCAAAACAAAATTTTTCGTCAAAAAAGATGTAGAGCCACGACCAAGTGTCACATTTTATCCAAATGATGAGAAGATAAAATTTGTTGTCAAAGATATA
GAGCCACGACCAAGTGTCACATTTTATCCCGATGATATCAAGACAGAGCATTTTGACAAAGATATAGAGCCACAACCAAGTGCCACATTTTATCCCAATGATGTCAAAAC
AAAGCTTTTCATCAAAGATATAGAGTCACGACCAATTTTCACGTTTTATCCAAATGATGTCAAGACAAAACTTTTTGTCAAAGATATAGATCAGCCACGACCAAGTGCCG
CATTTTATCCTAATGATGTCAAAACAAAGCTTTTCATCCAGGATAAAGAGACACGACCAACTACCACACTTTATCCCAATGACGTGAAAACAAAGTTTTTTATCCATGAT
ATA
mRNA sequenceShow/hide mRNA sequence
CTTGTCAGCAGCATAGAATCAAGATATGAACACTGGAGAAAGGTGATGGAAGATGAGCCATTACCAGCGAAGAAAGATTGCCTTGATCATACACAGCTTGAAAATAAAAA
GTCTTTTGTTAGGGATATCGAGCCACGGCCGAGTGTCATGTTTTATCCCGATGACGTCAAAATAAAGTTTTTCATGAAAGATATAGAACCACCACCAACTGCCACGCTTT
ATCCCGATATTGTCAAAACAAAATTTTTCGTCAAAAAAGATGTAGAGCCACGACCAAGTGTCACATTTTATCCAAATGATGAGAAGATAAAATTTGTTGTCAAAGATATA
GAGCCACGACCAAGTGTCACATTTTATCCCGATGATATCAAGACAGAGCATTTTGACAAAGATATAGAGCCACAACCAAGTGCCACATTTTATCCCAATGATGTCAAAAC
AAAGCTTTTCATCAAAGATATAGAGTCACGACCAATTTTCACGTTTTATCCAAATGATGTCAAGACAAAACTTTTTGTCAAAGATATAGATCAGCCACGACCAAGTGCCG
CATTTTATCCTAATGATGTCAAAACAAAGCTTTTCATCCAGGATAAAGAGACACGACCAACTACCACACTTTATCCCAATGACGTGAAAACAAAGTTTTTTATCCATGAT
ATA
Protein sequenceShow/hide protein sequence
LVSSIESRYEHWRKVMEDEPLPAKKDCLDHTQLENKKSFVRDIEPRPSVMFYPDDVKIKFFMKDIEPPPTATLYPDIVKTKFFVKKDVEPRPSVTFYPNDEKIKFVVKDI
EPRPSVTFYPDDIKTEHFDKDIEPQPSATFYPNDVKTKLFIKDIESRPIFTFYPNDVKTKLFVKDIDQPRPSAAFYPNDVKTKLFIQDKETRPTTTLYPNDVKTKFFIHD
I