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MS022087 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022087
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionlate embryogenesis abundant protein-like
Genome locationscaffold47:783357..783551
RNA-Seq ExpressionMS022087
SyntenyMS022087
Gene Ontology termsGO:0009414 - response to water deprivation (biological process)
GO:0009631 - cold acclimation (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0005829 - cytosol (cellular component)
InterPro domainsIPR000167 - Dehydrin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572053.1 Embryogenic cell protein 40, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1676.56Show/hide
Query:  KMADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLC-SGRDDGPSGGHG
        KMADI+DE+GNPI+LTDE GNPVVLTDEHGNP+RL+GVATK+G TLGSL+  SG +DG  GGHG
Subjt:  KMADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLC-SGRDDGPSGGHG
KAG7011719.1 Embryogenic cell protein 40 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-1676.56Show/hide
Query:  KMADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLC-SGRDDGPSGGHG
        KMADI+DE+GNPI+LTDE GNPVVLTDEHGNP+RL+GVATK+G TLGSL+  SG +DG  GGHG
Subjt:  KMADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLC-SGRDDGPSGGHG
XP_022135876.1 late embryogenesis abundant protein-like [Momordica charantia]7.0e-29100Show/hide
Query:  EEKMADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLCSGRDDGPSGGHG
        EEKMADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLCSGRDDGPSGGHG
Subjt:  EEKMADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLCSGRDDGPSGGHG
XP_038887694.1 late embryogenesis abundant protein-like isoform X1 [Benincasa hispida]1.8e-1676.19Show/hide
Query:  KMADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLCSGRDDGPSGGHG
        KMADIRDEHGNPI LTDE GNPV+LTDEHGNPM LTGVATK+G TLGSL+  G      GGHG
Subjt:  KMADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLCSGRDDGPSGGHG
XP_038887695.1 embryogenic cell protein 40-like isoform X2 [Benincasa hispida]1.8e-1676.19Show/hide
Query:  KMADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLCSGRDDGPSGGHG
        KMADIRDEHGNPI LTDE GNPV+LTDEHGNPM LTGVATK+G TLGSL+  G      GGHG
Subjt:  KMADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLCSGRDDGPSGGHG
TrEMBL top hitse value%identityAlignment
A0A6A3ADY7 Bifunctional phosphatase IMPL28.4e-1263.08Show/hide
Query:  MADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGP----TLGSLLCSGRDDGPSGGH
        MAD+RDEHGNPI+LTDE GNPV LTDEHGNP+ +TGVATK  P    T+ SL+  G D G +  H
Subjt:  MADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGP----TLGSLLCSGRDDGPSGGH
A0A6J1C1Y9 late embryogenesis abundant protein-like3.4e-29100Show/hide
Query:  EEKMADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLCSGRDDGPSGGHG
        EEKMADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLCSGRDDGPSGGHG
Subjt:  EEKMADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLCSGRDDGPSGGHG
A0A6J1GNP3 late embryogenesis abundant protein-like2.0e-1371.19Show/hide
Query:  RDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLC-SGRDDGPSGGHG
        +DE+GNPI+L DE GNPVVLTDEHGNP+RL+G+ATK+G TLGSL+  SG +DG  GGHG
Subjt:  RDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLC-SGRDDGPSGGHG
A0A6J1IJR5 late embryogenesis abundant protein-like1.7e-1271.19Show/hide
Query:  RDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLC-SGRDDGPSGGHG
        +DE+GNPI+ TDE GNPVVLTDEHGNP+R  GVATK+G TLGSL+  SG +DG  GGHG
Subjt:  RDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLC-SGRDDGPSGGHG
V9M5C3 Dehydrin protein3.8e-1273.47Show/hide
Query:  MADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLL
        MAD+RDE+GNPI+LTDE GNPV LTDEHGNP+ +TGVAT   PTLG+L+
Subjt:  MADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLL
SwissProt top hitse value%identityAlignment
P21298 Late embryogenesis abundant protein3.7e-0969.23Show/hide
Query:  MADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVAT
        MAD++DE GNPI LTD  GNPV L+DE GNPM +TGVA+
Subjt:  MADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVAT
Q07322 Embryogenic cell protein 401.2e-1069.57Show/hide
Query:  MADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLG
        MAD+RDE GNPI+LTD+ GNPV LTDE+GNP+ +TGVAT  G T G
Subjt:  MADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLG
Q96261 Probable dehydrin LEA1.7e-0975Show/hide
Query:  MADIRDEHGNPIELTDELGNPVV-LTDEHGNPMRLTGVAT
        MAD+RDE GNPI LTD  GNP+V LTDEHGNPM LTGV +
Subjt:  MADIRDEHGNPIELTDELGNPVV-LTDEHGNPMRLTGVAT
Arabidopsis top hitse value%identityAlignment
AT2G21490.1 dehydrin LEA1.2e-1075Show/hide
Query:  MADIRDEHGNPIELTDELGNPVV-LTDEHGNPMRLTGVAT
        MAD+RDE GNPI LTD  GNP+V LTDEHGNPM LTGV +
Subjt:  MADIRDEHGNPIELTDELGNPVV-LTDEHGNPMRLTGVAT
AT4G39130.1 Dehydrin family protein1.9e-0863.41Show/hide
Query:  MADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKI
        MAD++DE GNPI LTD  G P  L DE GN M LTGVAT +
Subjt:  MADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGGAAAAAATGGCTGATATTCGGGATGAGCATGGGAACCCCATTGAACTCACCGATGAGCTTGGCAACCCGGTTGTGTTGACCGATGAACATGGCAACCCCATGCGGCT
CACCGGGGTCGCCACCAAGATTGGCCCGACGCTCGGGTCGCTGTTGTGCAGTGGCCGTGATGATGGTCCTAGCGGTGGTCATGGC
mRNA sequenceShow/hide mRNA sequence
GAGGAAAAAATGGCTGATATTCGGGATGAGCATGGGAACCCCATTGAACTCACCGATGAGCTTGGCAACCCGGTTGTGTTGACCGATGAACATGGCAACCCCATGCGGCT
CACCGGGGTCGCCACCAAGATTGGCCCGACGCTCGGGTCGCTGTTGTGCAGTGGCCGTGATGATGGTCCTAGCGGTGGTCATGGC
Protein sequenceShow/hide protein sequence
EEKMADIRDEHGNPIELTDELGNPVVLTDEHGNPMRLTGVATKIGPTLGSLLCSGRDDGPSGGHG