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MS022088 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022088
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionOxidative stress 3
Genome locationscaffold47:786198..786912
RNA-Seq ExpressionMS022088
SyntenyMS022088
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033797.1 hypothetical protein E6C27_scaffold142G00550 [Cucumis melo var. makuwa]1.5e-2984.71Show/hide
Query:  MRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEI---PHFHSRRVSSSSHCSIPFFA
        M AFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVR VEDLKKPKHPDAKKRKKHS+CKEI   P FH RR  +SSHCS+PF A
Subjt:  MRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEI---PHFHSRRVSSSSHCSIPFFA

KAF3435745.1 hypothetical protein FNV43_RR22837 [Rhamnella rubrinervis]1.3e-2570Show/hide
Query:  MENEGN-SMRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEI--PHFHSRRVSSSSHCSIPF
        M+ E + +MR FDMGSLRTNLP KRGLSRYYSGK+RSF C+ADV C+EDLKKP+HPDAKKRKKHS+ K+I  PH+  RRVSSS+ C+ P+
Subjt:  MENEGN-SMRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEI--PHFHSRRVSSSSHCSIPF

KAG6588432.1 hypothetical protein SDJN03_16997, partial [Cucurbita argyrosperma subsp. sororia]5.7e-2978.26Show/hide
Query:  MENEGNSMRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEI---PHFHSRRVSSSSHCSIPFFA
        M+++GN+M AFDM SL  NLPQKRGLSRYYSGKARSFACIAD RCVEDLKKP HPDAKKRKKHS+CK I   PH H RR +SS+HCSIPFFA
Subjt:  MENEGNSMRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEI---PHFHSRRVSSSSHCSIPFFA

KGN43154.1 hypothetical protein Csa_020555 [Cucumis sativus]9.3e-3282.8Show/hide
Query:  MENEGNSMRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEI----PHFHSRRVSSSSHCSIPFFA
        ME++GNSM AFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVR VEDLKKPKHPDAKKRKKHS+ KEI    P FH RRV  SSHCS+PF A
Subjt:  MENEGNSMRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEI----PHFHSRRVSSSSHCSIPFFA

XP_018815335.1 uncharacterized protein LOC108986971 isoform X2 [Juglans regia]1.0e-2570.11Show/hide
Query:  MENEGNSMRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEIPHFHSRRVSSSSHCSIPF
        MEN+  SMR FDM +L+TNLPQKRGLSRYYSGK+R+F C+ADVRC+EDLKKP+HP+AKKRKK+SE K+I H   RRVSSS+ C+ P+
Subjt:  MENEGNSMRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEIPHFHSRRVSSSSHCSIPF

TrEMBL top hitse value%identityAlignment
A0A061E0R1 Uncharacterized protein7.7e-2475.31Show/hide
Query:  RAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEI---PHFHSRRVSSSSHCSIP
        RAFDMG+LR+NLPQKRGLSRYYSGKARSFACIADVRCVEDLKK +HPDAKKRKK+S  KE+     +  RRVSS +HC+ P
Subjt:  RAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEI---PHFHSRRVSSSSHCSIP

A0A0A0K2B1 Uncharacterized protein4.5e-3282.8Show/hide
Query:  MENEGNSMRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEI----PHFHSRRVSSSSHCSIPFFA
        ME++GNSM AFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVR VEDLKKPKHPDAKKRKKHS+ KEI    P FH RRV  SSHCS+PF A
Subjt:  MENEGNSMRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEI----PHFHSRRVSSSSHCSIPFFA

A0A2I4E7G3 uncharacterized protein LOC108986971 isoform X12.7e-2468.18Show/hide
Query:  MENEGNSMRAFDMGSLRTNLPQ-KRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEIPHFHSRRVSSSSHCSIPF
        MEN+  SMR FDM +L+TNLPQ +RGLSRYYSGK+R+F C+ADVRC+EDLKKP+HP+AKKRKK+SE K+I H   RRVSSS+ C+ P+
Subjt:  MENEGNSMRAFDMGSLRTNLPQ-KRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEIPHFHSRRVSSSSHCSIPF

A0A2I4E7G8 uncharacterized protein LOC108986971 isoform X24.8e-2670.11Show/hide
Query:  MENEGNSMRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEIPHFHSRRVSSSSHCSIPF
        MEN+  SMR FDM +L+TNLPQKRGLSRYYSGK+R+F C+ADVRC+EDLKKP+HP+AKKRKK+SE K+I H   RRVSSS+ C+ P+
Subjt:  MENEGNSMRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEIPHFHSRRVSSSSHCSIPF

A0A5A7SX13 Uncharacterized protein7.2e-3084.71Show/hide
Query:  MRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEI---PHFHSRRVSSSSHCSIPFFA
        M AFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVR VEDLKKPKHPDAKKRKKHS+CKEI   P FH RR  +SSHCS+PF A
Subjt:  MRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEI---PHFHSRRVSSSSHCSIPFFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G03170.1 unknown protein2.3e-0440.32Show/hide
Query:  KRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEIPHFHSRRVSSSSHCS
        +RGLS++Y GK++SF  +A+   VEDL KP++P   K K+  E       H RR+S     S
Subjt:  KRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEIPHFHSRRVSSSSHCS

AT5G21940.1 unknown protein8.8e-0435.09Show/hide
Query:  MGSLRTNLPQKRGLSRYYSGKARSF--------ACIADVRCVEDLKKPKHPDAKKRK
        M SL   LP ++G+S+YYSGK++SF        + +     ++DL KP++P +++R+
Subjt:  MGSLRTNLPQKRGLSRYYSGKARSF--------ACIADVRCVEDLKKPKHPDAKKRK

AT5G24890.1 unknown protein3.6e-0533.82Show/hide
Query:  ENEGNSMRAFDMG--------SLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRK
        ENE + + + ++G        SL  +LP KRGLS +Y GK++SF  + ++  V+++ K ++P  K+R+
Subjt:  ENEGNSMRAFDMG--------SLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRK

AT5G56550.1 oxidative stress 32.1e-0547.5Show/hide
Query:  DMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKK
        D+  L ++LP KRGLS++Y GK++SF  + +V+ +EDL K
Subjt:  DMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATGAAGGCAATAGCATGAGGGCTTTTGACATGGGTTCTCTTAGGACAAATCTTCCTCAAAAGAGGGGTTTGTCGAGGTACTACTCGGGAAAAGCGAGGTCATT
TGCTTGCATAGCAGATGTTAGATGTGTGGAAGATCTGAAGAAACCAAAGCATCCAGATGCCAAGAAAAGGAAGAAGCATTCTGAATGCAAAGAAATCCCTCATTTTCATT
CACGACGAGTTTCAAGTAGTTCTCATTGTTCAATTCCCTTCTTTGCGATG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATGAAGGCAATAGCATGAGGGCTTTTGACATGGGTTCTCTTAGGACAAATCTTCCTCAAAAGAGGGGTTTGTCGAGGTACTACTCGGGAAAAGCGAGGTCATT
TGCTTGCATAGCAGATGTTAGATGTGTGGAAGATCTGAAGAAACCAAAGCATCCAGATGCCAAGAAAAGGAAGAAGCATTCTGAATGCAAAGAAATCCCTCATTTTCATT
CACGACGAGTTTCAAGTAGTTCTCATTGTTCAATTCCCTTCTTTGCGATG
Protein sequenceShow/hide protein sequence
MENEGNSMRAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKPKHPDAKKRKKHSECKEIPHFHSRRVSSSSHCSIPFFAM