; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022105 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022105
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCRM domain-containing protein
Genome locationscaffold47:908887..910669
RNA-Seq ExpressionMS022105
SyntenyMS022105
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588422.1 hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sororia]2.7e-9372.22Show/hide
Query:  MGASIMS--SRPHLIHSLLLRSVPFSSSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDE
        MGASIMS  S  HLIHSLLLRSVP SS S+     +A +S  C  QF+PNSSIFLIR+SPHR R F PSASVS ++SFSS +S  S V F E+DD I+D+
Subjt:  MGASIMS--SRPHLIHSLLLRSVPFSSSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDE

Query:  DDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKI
        ++SDYE EV I DFELE+ ++    +    S  SS+VV+ SEVKN+PSLTVKEKKELASYAHSLGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIK+
Subjt:  DDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKI

Query:  LRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
        L NCP EL+D VRQLEESTGSVVVS+IGRTVIIYRPSISKMKAEE+KR+ARK+YVRKEPDRVK  LQNKVQTP   +SNRGRRGSSRF
Subjt:  LRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

XP_008448058.1 PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]5.3e-8968.06Show/hide
Query:  MGASIMSSRPHL-IHSLLLRSVPFS-SSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDE
        M ASI+SS  H   HSLLLRSVP S S+  +  +A AA ST CF QF+P+SS FL R+SPH  R F PS S+S ++ FSS +SGPSEV F+E DDEIED+
Subjt:  MGASIMSSRPHL-IHSLLLRSVPFS-SSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDE

Query:  DDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKI
        D+SDYE EV +      E+S+G  ++    S+LSS V+N +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIKI
Subjt:  DDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKI

Query:  LRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
        L NCP +L+D VR+LEESTGSVVV+QIGRTVIIYRPSI+KMKAEE+KR++RKIY+RKEPDRVKSILQ KV+TP   +SNRGRRG+SR+
Subjt:  LRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

XP_022135882.1 uncharacterized protein LOC111007723 [Momordica charantia]2.2e-90100Show/hide
Query:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL
        DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL
Subjt:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL

Query:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
        RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
Subjt:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

XP_022971306.1 uncharacterized protein LOC111470060 [Cucurbita maxima]1.9e-9472.92Show/hide
Query:  MGASIMS--SRPHLIHSLLLRSVPFSSSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDE
        MGASIMS  S  HLIHSLLLRSVP SS S+     +A +S  C  QF+PNSSIFLIR+SPHR R F PSASVS ++SFSS +SG S V F E+DD I+D+
Subjt:  MGASIMS--SRPHLIHSLLLRSVPFSSSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDE

Query:  DDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKI
        D+SDYE EV I DFELE+ ++    +    S  SS+VV+ SEVK++PSLTVKEKKELASYAHSLGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIK+
Subjt:  DDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKI

Query:  LRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
        L NCP EL+D VRQLEESTGSVVVS+IGRTVIIYRPSISKMKAEE+KR+ARKIYVRKEPDRVK  LQNKVQTP   +SNRGRRGSSRF
Subjt:  LRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

XP_023529380.1 uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo]2.3e-9271.09Show/hide
Query:  MGASIMS--SRPHLIHSLLLRSVPFSSSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDE
        MGASIMS  S  HLIHSLLLRSVP SS S+  +  +AA+S  C  QF+PNSSIFLIR+SPHR R F+PSASVS ++SFSS +S  S V F E+DD I+D+
Subjt:  MGASIMS--SRPHLIHSLLLRSVPFSSSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDE

Query:  DDSDY------EGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANE
        D+SDY      E EV I DFELE+ ++    +    S  SS+VV+ SEVKN+PSLTVKEKKELASYAHSLGKKLK+QLVGKSGVTPGLA SF+ETLEANE
Subjt:  DDSDY------EGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANE

Query:  LLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
        LLKIK+L NCP EL+D V+QLEESTGSVVVS+IGRTVIIYRPSISKMKAEE+KR+ARK+YVRKEPDRVK  LQNKVQTP   +SNRGRRGSSRF
Subjt:  LLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

TrEMBL top hitse value%identityAlignment
A0A0A0K2C3 CRM domain-containing protein8.3e-8866.78Show/hide
Query:  MGASIMSSRPHLIHSLLLRSVPFS-SSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDED
        MGASI+SS     HSLLLRS+P S S+  +  +AAAA+ST CF QF+P+SS  L R SPH +R F PSA +S ++SFSS +S PSEV F+E DDEIED+D
Subjt:  MGASIMSSRPHLIHSLLLRSVPFS-SSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDED

Query:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL
        +SDYE EV +      E+ +G  ++    S+LSS +++ +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIKIL
Subjt:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL

Query:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSR
         NCP EL+D VR+L ESTGSVVV+QIGRTVIIYRPSI+KMKAEE+KR+ARK+Y+RKEPDRVKSILQ K++TP   +SNRGRRG+SR
Subjt:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSR

A0A1S3BJF7 uncharacterized protein LOC1034903502.6e-8968.06Show/hide
Query:  MGASIMSSRPHL-IHSLLLRSVPFS-SSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDE
        M ASI+SS  H   HSLLLRSVP S S+  +  +A AA ST CF QF+P+SS FL R+SPH  R F PS S+S ++ FSS +SGPSEV F+E DDEIED+
Subjt:  MGASIMSSRPHL-IHSLLLRSVPFS-SSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDE

Query:  DDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKI
        D+SDYE EV +      E+S+G  ++    S+LSS V+N +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIKI
Subjt:  DDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKI

Query:  LRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
        L NCP +L+D VR+LEESTGSVVV+QIGRTVIIYRPSI+KMKAEE+KR++RKIY+RKEPDRVKSILQ KV+TP   +SNRGRRG+SR+
Subjt:  LRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

A0A5D3DFJ1 Putative RNA-binding CRS1 / YhbY domain protein3.3e-6078.53Show/hide
Query:  QADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVS
        +    S+LSS V+N +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIKIL NCP EL+D VR+LEESTGSVVV+
Subjt:  QADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVS

Query:  QIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
        QIGRTVIIYRPSI+KMKAEE+KR++RKIY+RKEPDRVKSILQ KV+TP   +SNRGRRG+SR+
Subjt:  QIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

A0A6J1C409 uncharacterized protein LOC1110077231.0e-90100Show/hide
Query:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL
        DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL
Subjt:  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKIL

Query:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
        RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
Subjt:  RNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

A0A6J1I2Z3 uncharacterized protein LOC1114700609.2e-9572.92Show/hide
Query:  MGASIMS--SRPHLIHSLLLRSVPFSSSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDE
        MGASIMS  S  HLIHSLLLRSVP SS S+     +A +S  C  QF+PNSSIFLIR+SPHR R F PSASVS ++SFSS +SG S V F E+DD I+D+
Subjt:  MGASIMS--SRPHLIHSLLLRSVPFSSSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDE

Query:  DDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKI
        D+SDYE EV I DFELE+ ++    +    S  SS+VV+ SEVK++PSLTVKEKKELASYAHSLGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIK+
Subjt:  DDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKI

Query:  LRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
        L NCP EL+D VRQLEESTGSVVVS+IGRTVIIYRPSISKMKAEE+KR+ARKIYVRKEPDRVK  LQNKVQTP   +SNRGRRGSSRF
Subjt:  LRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

SwissProt top hitse value%identityAlignment
P0AGK4 RNA-binding protein YhbY8.5e-0532.22Show/hide
Query:  SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI           V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPS

P0AGK5 RNA-binding protein YhbY8.5e-0532.22Show/hide
Query:  SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI           V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPS

P0AGK6 RNA-binding protein YhbY8.5e-0532.22Show/hide
Query:  SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI           V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPS

P54454 Probable RNA-binding protein YqeI1.1e-0735.42Show/hide
Query:  LTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAE
        LT K+K+ L S AH L    +   VGK GV   +     E LEA EL+K+ +L+NC  + +D    L + + S +V  IG T+++Y+ S    + E
Subjt:  LTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAE

Arabidopsis top hitse value%identityAlignment
AT2G21350.1 RNA-binding CRS1 / YhbY (CRM) domain protein8.6e-2944.55Show/hide
Query:  RPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLP
        RP S   L R+S H     +         SFS  L   S   F+  D+  +DED+         V        I  + Q D  S+L+   +  +   +  
Subjt:  RPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLP

Query:  SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKK
         L+ KEK++LASYAH LG KLK+QLVGKSGVT  + +SFVETLE NELLK+KI R CP EL+D + +LEE+TGSV V QI RTVI+YRPS +K+KA+E K
Subjt:  SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKK

Query:  RQ
        ++
Subjt:  RQ

AT4G39040.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.8e-3440.2Show/hide
Query:  ASIMSSRPHLIHSLLLRSVPFSSSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFA----PSASVSVAQSFSSALSGPSEVEFNEEDDEIEDE
        AS   S  HLIH+LL    P        +     L   CF      S+     R+  RF+ F+    P  S S+     S++  P      EED+E EDE
Subjt:  ASIMSSRPHLIHSLLLRSVPFSSSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFA----PSASVSVAQSFSSALSGPSEVEFNEEDDEIEDE

Query:  DDSDYEGEVRIVDFELEEES--------IGGESQADAVSQLSSSVVNGSEVKNLPS------LTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISF
        D S  E E    + E E++S        I     ++ VS++          K   S      L++KEKKELASYAHSLG KLK QLVGKSGVT  +  SF
Subjt:  DDSDYEGEVRIVDFELEEES--------IGGESQADAVSQLSSSVVNGSEVKNLPS------LTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISF

Query:  VETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPD-----RVKSILQNKVQTPGISNSNRG
        +ETLE NELLK+KI +  P EL+DAV+ LEE+TGSV V QIGRTVI+YRPS +KMKAE KK++  ++ + +          K   +   + P      RG
Subjt:  VETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPD-----RVKSILQNKVQTPGISNSNRG

Query:  RRGSSR
        RRG SR
Subjt:  RRGSSR

AT4G39040.2 RNA-binding CRS1 / YhbY (CRM) domain protein2.3e-3442.07Show/hide
Query:  ASIMSSRPHLIHSLLLRSVPFSSSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFA----PSASVSVAQSFSSALSGPSEVEFNEEDDEIEDE
        AS   S  HLIH+LL    P        +     L   CF      S+     R+  RF+ F+    P  S S+     S++  P      EED+E EDE
Subjt:  ASIMSSRPHLIHSLLLRSVPFSSSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFA----PSASVSVAQSFSSALSGPSEVEFNEEDDEIEDE

Query:  DDSDYEGEVRIVDFELEEES--------IGGESQADAVSQLSSSVVNGSEVKNLPS------LTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISF
        D S  E E    + E E++S        I     ++ VS++          K   S      L++KEKKELASYAHSLG KLK QLVGKSGVT  +  SF
Subjt:  DDSDYEGEVRIVDFELEEES--------IGGESQADAVSQLSSSVVNGSEVKNLPS------LTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISF

Query:  VETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRK
        +ETLE NELLK+KI +  P EL+DAV+ LEE+TGSV V QIGRTVI+YRPS +KMKAE KK++  ++ + +
Subjt:  VETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTTCGATAATGTCCTCTCGCCCTCACCTGATCCACTCTCTTCTTCTCCGGTCAGTTCCCTTCTCCTCCTCCTCCTCCACCGCCGCCGCCGCCGCCGCTGCCCT
CTCCACCGGTTGCTTCCGTCAATTCAGACCAAACAGTTCAATCTTCCTCATTCGTCGATCTCCTCATCGATTCCGGGATTTCGCTCCCTCCGCATCCGTTTCCGTCGCTC
AATCCTTTTCCTCCGCCCTTTCTGGTCCCTCTGAGGTCGAATTCAATGAGGAGGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGGTGAAGTTCGAATCGTG
GATTTCGAACTTGAGGAGGAGAGCATTGGGGGTGAATCGCAAGCTGATGCAGTTTCGCAGTTGTCTTCGTCGGTGGTGAATGGAAGTGAAGTGAAGAATCTTCCGAGCTT
GACGGTTAAGGAGAAGAAAGAGTTAGCGTCATACGCCCATAGCCTGGGGAAGAAGCTGAAAACTCAGTTGGTGGGCAAGTCTGGCGTTACTCCTGGCTTGGCTATTTCTT
TCGTCGAGACGCTTGAAGCCAACGAGCTTCTCAAGATCAAAATTCTCAGGAACTGTCCAGTGGAGCTGGATGATGCGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTG
GTGGTCAGTCAAATTGGCAGAACTGTTATTATTTACAGGCCCAGCATCTCAAAAATGAAAGCCGAGGAGAAAAAAAGGCAAGCACGGAAAATTTACGTGAGAAAAGAACC
CGATCGGGTGAAATCCATTCTACAGAATAAAGTACAAACACCCGGGATCTCTAACTCCAACCGCGGTCGTCGTGGAAGCAGCAGGTTT
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCTTCGATAATGTCCTCTCGCCCTCACCTGATCCACTCTCTTCTTCTCCGGTCAGTTCCCTTCTCCTCCTCCTCCTCCACCGCCGCCGCCGCCGCCGCTGCCCT
CTCCACCGGTTGCTTCCGTCAATTCAGACCAAACAGTTCAATCTTCCTCATTCGTCGATCTCCTCATCGATTCCGGGATTTCGCTCCCTCCGCATCCGTTTCCGTCGCTC
AATCCTTTTCCTCCGCCCTTTCTGGTCCCTCTGAGGTCGAATTCAATGAGGAGGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGGTGAAGTTCGAATCGTG
GATTTCGAACTTGAGGAGGAGAGCATTGGGGGTGAATCGCAAGCTGATGCAGTTTCGCAGTTGTCTTCGTCGGTGGTGAATGGAAGTGAAGTGAAGAATCTTCCGAGCTT
GACGGTTAAGGAGAAGAAAGAGTTAGCGTCATACGCCCATAGCCTGGGGAAGAAGCTGAAAACTCAGTTGGTGGGCAAGTCTGGCGTTACTCCTGGCTTGGCTATTTCTT
TCGTCGAGACGCTTGAAGCCAACGAGCTTCTCAAGATCAAAATTCTCAGGAACTGTCCAGTGGAGCTGGATGATGCGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTG
GTGGTCAGTCAAATTGGCAGAACTGTTATTATTTACAGGCCCAGCATCTCAAAAATGAAAGCCGAGGAGAAAAAAAGGCAAGCACGGAAAATTTACGTGAGAAAAGAACC
CGATCGGGTGAAATCCATTCTACAGAATAAAGTACAAACACCCGGGATCTCTAACTCCAACCGCGGTCGTCGTGGAAGCAGCAGGTTT
Protein sequenceShow/hide protein sequence
MGASIMSSRPHLIHSLLLRSVPFSSSSSTAAAAAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSGPSEVEFNEEDDEIEDEDDSDYEGEVRIV
DFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSV
VVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF