; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022111 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022111
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEndoglucanase
Genome locationscaffold47:943776..944477
RNA-Seq ExpressionMS022111
SyntenyMS022111
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148538.1 uncharacterized protein LOC101213547 [Cucumis sativus]5.9e-7865.99Show/hide
Query:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDI--DMLPSNNEKESIFPW
        MVE SISS+LDS PESKE VD LTPEDIAWVDSCLI E PDISDGNWN++K ALLEI+DLYP+ F SS  LSDN PG +  DI  DMLPSNN KE  F  
Subjt:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDI--DMLPSNNEKESIFPW

Query:  GDDDD------------PMSEPGIASEDPR-DHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELL
         D DD            PM++ GIASEDP+  HDDIDTSL  +  KNPFLPTYKEE  G  EN Q G   +LSEIG + P+N+IF VWDLN PPVEDEL+
Subjt:  GDDDD------------PMSEPGIASEDPR-DHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELL

Query:  EQLNKALSENSFKSLPSMWDNRSVLKDFKEESLDDLINSISDLSLEQ
        EQLNKAL+ENS + +PSM  N  V KD KE+ LDDLINSISDLSLEQ
Subjt:  EQLNKALSENSFKSLPSMWDNRSVLKDFKEESLDDLINSISDLSLEQ

XP_008444927.1 PREDICTED: uncharacterized protein LOC103488123 [Cucumis melo]1.3e-8067.89Show/hide
Query:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDI--DMLPSNNEKESIFPW
        MVE SISS+LD  PESKE VD LT EDIAWVDSCLI E PDISDGNWN++K ALLEILDLYP+ F SS  LSDN PG +  DI  DMLPSNN KE  F  
Subjt:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDI--DMLPSNNEKESIFPW

Query:  GDDDD------------PMSEPGIASEDPRDHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLE
         D DD            PM++ GIASEDP+ HDDIDTSL L+  KNPFLPTYKEE  G  EN Q G   +LSEIG E P+NDIF VWDLN PPVEDEL+E
Subjt:  GDDDD------------PMSEPGIASEDPRDHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLE

Query:  QLNKALSENSFKSLPSMWDNRSVLKDFKEESLDDLINSISDLSLEQ
        QLNKAL+ENS +S+PSM  N  VLKD KE+ LDDLINSISDLSLEQ
Subjt:  QLNKALSENSFKSLPSMWDNRSVLKDFKEESLDDLINSISDLSLEQ

XP_022135637.1 uncharacterized protein LOC111007546 [Momordica charantia]5.8e-12699.15Show/hide
Query:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDIDMLPSNNEKESIFPWGD
        MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDIDMLPSNNEKESIFPWGD
Subjt:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDIDMLPSNNEKESIFPWGD

Query:  DDDPMSEPGIASEDPRDHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLEQLNKALSENSFKSL
        DDDPMSEPGIASEDPRDHDDIDTSLSLSFSKNPFLPTYK E+VGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLEQLNKALSENSFKSL
Subjt:  DDDPMSEPGIASEDPRDHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLEQLNKALSENSFKSL

Query:  PSMWDNRSVLKDFKEESLDDLINSISDLSLEQNN
        PSMWDNRSVLKDFKEESLDDLINSISDLSLEQNN
Subjt:  PSMWDNRSVLKDFKEESLDDLINSISDLSLEQNN

XP_022971265.1 uncharacterized protein LOC111470037 [Cucurbita maxima]5.5e-6853.47Show/hide
Query:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDID----------------
        M+E S SS L+S  ESKE +D LTPEDIAW DSCLI E PDI DGNWN++K ALLE+ DLYP+ F S   +SDN PGGT DD+D                
Subjt:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDID----------------

Query:  ------------------------------------------MLPSNNEKESIFPWGDDDDPMSEPGIASEDPRDHDDIDTSLSLSFSKNPFLPTYKEEE
                                                  ML SNN K+  F   D DD M+E G+ASED + HDDIDTSLSLSF+KNPFLPTYK EE
Subjt:  ------------------------------------------MLPSNNEKESIFPWGDDDDPMSEPGIASEDPRDHDDIDTSLSLSFSKNPFLPTYKEEE

Query:  VGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLEQLNKALSENSFKSLPSMWDNRSVLKDFKEESLDDLINSISDLSL
        V GKE+ QT SS DL EIG+E P+NDIF+VWDLNLPP+E++L+EQLNKALSENS +S+     N SVLKDF ++ LD LI+SISDLSL
Subjt:  VGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLEQLNKALSENSFKSLPSMWDNRSVLKDFKEESLDDLINSISDLSL

XP_038887167.1 uncharacterized protein LOC120077354 [Benincasa hispida]1.3e-7771.82Show/hide
Query:  ESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDI--DMLPSNNEKESIFPWGDDDDPMSEPGIAS
        ESKE VDALTPEDIAWVDSCLI ETPDISDGNWN++K ALLEILDLYP+SF SS  +S NAPGG+  DI  DML  NN KE  F   D DDPM+E GIAS
Subjt:  ESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDI--DMLPSNNEKESIFPWGDDDDPMSEPGIAS

Query:  EDPRDHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLEQLNKALSENSFKSLPSMWDNRSVLKD
        EDP+ HDDIDTSL  +  KNPFLPTYKEE  G  EN Q G   +LSEIG E P+NDIF VWDLN PPVEDEL+EQLNKAL+EN  +S PSM  N  VLKD
Subjt:  EDPRDHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLEQLNKALSENSFKSLPSMWDNRSVLKD

Query:  FKEESLDDLINSISDLSLEQ
         KE+ LDDLINSISDLSLEQ
Subjt:  FKEESLDDLINSISDLSLEQ

TrEMBL top hitse value%identityAlignment
A0A0A0K2C8 Uncharacterized protein2.9e-7865.99Show/hide
Query:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDI--DMLPSNNEKESIFPW
        MVE SISS+LDS PESKE VD LTPEDIAWVDSCLI E PDISDGNWN++K ALLEI+DLYP+ F SS  LSDN PG +  DI  DMLPSNN KE  F  
Subjt:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDI--DMLPSNNEKESIFPW

Query:  GDDDD------------PMSEPGIASEDPR-DHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELL
         D DD            PM++ GIASEDP+  HDDIDTSL  +  KNPFLPTYKEE  G  EN Q G   +LSEIG + P+N+IF VWDLN PPVEDEL+
Subjt:  GDDDD------------PMSEPGIASEDPR-DHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELL

Query:  EQLNKALSENSFKSLPSMWDNRSVLKDFKEESLDDLINSISDLSLEQ
        EQLNKAL+ENS + +PSM  N  V KD KE+ LDDLINSISDLSLEQ
Subjt:  EQLNKALSENSFKSLPSMWDNRSVLKDFKEESLDDLINSISDLSLEQ

A0A1S3BBI4 uncharacterized protein LOC1034881236.2e-8167.89Show/hide
Query:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDI--DMLPSNNEKESIFPW
        MVE SISS+LD  PESKE VD LT EDIAWVDSCLI E PDISDGNWN++K ALLEILDLYP+ F SS  LSDN PG +  DI  DMLPSNN KE  F  
Subjt:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDI--DMLPSNNEKESIFPW

Query:  GDDDD------------PMSEPGIASEDPRDHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLE
         D DD            PM++ GIASEDP+ HDDIDTSL L+  KNPFLPTYKEE  G  EN Q G   +LSEIG E P+NDIF VWDLN PPVEDEL+E
Subjt:  GDDDD------------PMSEPGIASEDPRDHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLE

Query:  QLNKALSENSFKSLPSMWDNRSVLKDFKEESLDDLINSISDLSLEQ
        QLNKAL+ENS +S+PSM  N  VLKD KE+ LDDLINSISDLSLEQ
Subjt:  QLNKALSENSFKSLPSMWDNRSVLKDFKEESLDDLINSISDLSLEQ

A0A5D3BCZ2 Uncharacterized protein6.2e-8167.89Show/hide
Query:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDI--DMLPSNNEKESIFPW
        MVE SISS+LD  PESKE VD LT EDIAWVDSCLI E PDISDGNWN++K ALLEILDLYP+ F SS  LSDN PG +  DI  DMLPSNN KE  F  
Subjt:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDI--DMLPSNNEKESIFPW

Query:  GDDDD------------PMSEPGIASEDPRDHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLE
         D DD            PM++ GIASEDP+ HDDIDTSL L+  KNPFLPTYKEE  G  EN Q G   +LSEIG E P+NDIF VWDLN PPVEDEL+E
Subjt:  GDDDD------------PMSEPGIASEDPRDHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLE

Query:  QLNKALSENSFKSLPSMWDNRSVLKDFKEESLDDLINSISDLSLEQ
        QLNKAL+ENS +S+PSM  N  VLKD KE+ LDDLINSISDLSLEQ
Subjt:  QLNKALSENSFKSLPSMWDNRSVLKDFKEESLDDLINSISDLSLEQ

A0A6J1C3A0 uncharacterized protein LOC1110075462.8e-12699.15Show/hide
Query:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDIDMLPSNNEKESIFPWGD
        MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDIDMLPSNNEKESIFPWGD
Subjt:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDIDMLPSNNEKESIFPWGD

Query:  DDDPMSEPGIASEDPRDHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLEQLNKALSENSFKSL
        DDDPMSEPGIASEDPRDHDDIDTSLSLSFSKNPFLPTYK E+VGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLEQLNKALSENSFKSL
Subjt:  DDDPMSEPGIASEDPRDHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLEQLNKALSENSFKSL

Query:  PSMWDNRSVLKDFKEESLDDLINSISDLSLEQNN
        PSMWDNRSVLKDFKEESLDDLINSISDLSLEQNN
Subjt:  PSMWDNRSVLKDFKEESLDDLINSISDLSLEQNN

A0A6J1I1I4 uncharacterized protein LOC1114700372.7e-6853.47Show/hide
Query:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDID----------------
        M+E S SS L+S  ESKE +D LTPEDIAW DSCLI E PDI DGNWN++K ALLE+ DLYP+ F S   +SDN PGGT DD+D                
Subjt:  MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDID----------------

Query:  ------------------------------------------MLPSNNEKESIFPWGDDDDPMSEPGIASEDPRDHDDIDTSLSLSFSKNPFLPTYKEEE
                                                  ML SNN K+  F   D DD M+E G+ASED + HDDIDTSLSLSF+KNPFLPTYK EE
Subjt:  ------------------------------------------MLPSNNEKESIFPWGDDDDPMSEPGIASEDPRDHDDIDTSLSLSFSKNPFLPTYKEEE

Query:  VGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLEQLNKALSENSFKSLPSMWDNRSVLKDFKEESLDDLINSISDLSL
        V GKE+ QT SS DL EIG+E P+NDIF+VWDLNLPP+E++L+EQLNKALSENS +S+     N SVLKDF ++ LD LI+SISDLSL
Subjt:  VGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLEQLNKALSENSFKSLPSMWDNRSVLKDFKEESLDDLINSISDLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G38980.1 unknown protein6.0e-1226.77Show/hide
Query:  LTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSA------VLSDNAPGGTKDDIDM-------------LPSNNEKES---------
        L+PE +AW DSC+I+   D  + NW   + AL EI+D++PE F  S+      VLS +      + ID+               S+NE+ S         
Subjt:  LTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSA------VLSDNAPGGTKDDIDM-------------LPSNNEKES---------

Query:  -----------IFPWGDDDDPMSEPGIASE----------------DPRDHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVN
                    FP    ++   EP   S+                +    ++   S+S    K+ F+ TY E+              +++E   +    
Subjt:  -----------IFPWGDDDDPMSEPGIASE----------------DPRDHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVN

Query:  DIFRVWDLNL---PPVEDELLEQLNKALSENS-FKSLPSMWDNRSVLKDFKEESLDDLINSISDLSLEQ
        +IF+VWDL +      ED L+ QL KAL E+S  + LP   ++  V+ +  + ++DDLI+ ISDLSL +
Subjt:  DIFRVWDLNL---PPVEDELLEQLNKALSENS-FKSLPSMWDNRSVLKDFKEESLDDLINSISDLSLEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAAGAATCCATCTCTTCTTATCTCGACAGTAGACCGGAATCTAAAGAGCCAGTTGATGCTCTTACTCCTGAAGACATTGCTTGGGTTGATTCTTGTCTGATTAA
CGAGACACCCGATATTTCTGATGGGAATTGGAACAATATGAAGTCTGCCTTATTGGAAATCCTCGATCTGTATCCTGAAAGTTTTGCATCTTCTGCTGTATTAAGTGATA
ATGCTCCGGGAGGTACTAAAGATGACATTGACATGCTTCCCTCTAATAATGAAAAGGAATCCATATTTCCCTGGGGAGATGATGATGATCCTATGAGCGAACCAGGAATA
GCTTCGGAAGATCCACGAGACCATGACGATATCGATACATCTCTGTCGTTATCGTTTAGCAAGAATCCATTTTTACCCACTTACAAAGAAGAGGAGGTAGGAGGGAAGGA
GAATACTCAAACTGGATCCAGCCAGGATTTATCAGAAATTGGATATGAGTTCCCAGTAAACGATATTTTCAGGGTCTGGGACTTGAACCTCCCTCCGGTCGAAGATGAGC
TTCTCGAGCAGCTTAACAAAGCCCTTTCCGAAAATTCCTTTAAATCACTTCCTTCAATGTGGGATAATCGTAGTGTCTTGAAAGACTTCAAGGAAGAATCACTTGATGAC
TTGATCAATAGCATTTCAGACCTGTCTTTAGAACAGAATAAT
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAAGAATCCATCTCTTCTTATCTCGACAGTAGACCGGAATCTAAAGAGCCAGTTGATGCTCTTACTCCTGAAGACATTGCTTGGGTTGATTCTTGTCTGATTAA
CGAGACACCCGATATTTCTGATGGGAATTGGAACAATATGAAGTCTGCCTTATTGGAAATCCTCGATCTGTATCCTGAAAGTTTTGCATCTTCTGCTGTATTAAGTGATA
ATGCTCCGGGAGGTACTAAAGATGACATTGACATGCTTCCCTCTAATAATGAAAAGGAATCCATATTTCCCTGGGGAGATGATGATGATCCTATGAGCGAACCAGGAATA
GCTTCGGAAGATCCACGAGACCATGACGATATCGATACATCTCTGTCGTTATCGTTTAGCAAGAATCCATTTTTACCCACTTACAAAGAAGAGGAGGTAGGAGGGAAGGA
GAATACTCAAACTGGATCCAGCCAGGATTTATCAGAAATTGGATATGAGTTCCCAGTAAACGATATTTTCAGGGTCTGGGACTTGAACCTCCCTCCGGTCGAAGATGAGC
TTCTCGAGCAGCTTAACAAAGCCCTTTCCGAAAATTCCTTTAAATCACTTCCTTCAATGTGGGATAATCGTAGTGTCTTGAAAGACTTCAAGGAAGAATCACTTGATGAC
TTGATCAATAGCATTTCAGACCTGTCTTTAGAACAGAATAAT
Protein sequenceShow/hide protein sequence
MVEESISSYLDSRPESKEPVDALTPEDIAWVDSCLINETPDISDGNWNNMKSALLEILDLYPESFASSAVLSDNAPGGTKDDIDMLPSNNEKESIFPWGDDDDPMSEPGI
ASEDPRDHDDIDTSLSLSFSKNPFLPTYKEEEVGGKENTQTGSSQDLSEIGYEFPVNDIFRVWDLNLPPVEDELLEQLNKALSENSFKSLPSMWDNRSVLKDFKEESLDD
LINSISDLSLEQNN