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MS022113 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022113
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description30S ribosomal protein S31, mitochondrial
Genome locationscaffold47:964669..964932
RNA-Seq ExpressionMS022113
SyntenyMS022113
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
InterPro domainsIPR030826 - 30S ribosomal protein
IPR044695 - 30S ribosomal protein S31, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448047.1 PREDICTED: 30S ribosomal protein S31, mitochondrial [Cucumis melo]2.0e-3487.5Show/hide
Query:  MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAM QWCGAVAR V+A ERR+PSLTS MA E LVPILCGRGDKKTK+GKRFKGSYGNARPKKEKKI+RIKDKIEVP STPWPLPFKLI
Subjt:  MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_022136007.1 30S ribosomal protein S31, mitochondrial [Momordica charantia]1.8e-40100Show/hide
Query:  MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_022933003.1 30S ribosomal protein S31, mitochondrial [Cucurbita moschata]6.1e-3692.05Show/hide
Query:  MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAMMQWCGAVAR VMA ERR+PSLTS MA E LVPILCGRGDKKTKKGK FKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_022952601.1 30S ribosomal protein S31, mitochondrial-like [Cucurbita moschata]2.0e-3489.53Show/hide
Query:  MMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        M QWCGA+A+RVMA ERR+PSLTS MA E LVPILCGRGDKKTKKGK FKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_038888313.1 30S ribosomal protein S31, mitochondrial [Benincasa hispida]8.8e-3590.91Show/hide
Query:  MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAM Q CGA+AR VMA ERR+PSLTS MAAE LVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

TrEMBL top hitse value%identityAlignment
A0A1S3BI88 30S ribosomal protein S31, mitochondrial9.5e-3587.5Show/hide
Query:  MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAM QWCGAVAR V+A ERR+PSLTS MA E LVPILCGRGDKKTK+GKRFKGSYGNARPKKEKKI+RIKDKIEVP STPWPLPFKLI
Subjt:  MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A5A7SX60 30S ribosomal protein S319.5e-3587.5Show/hide
Query:  MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAM QWCGAVAR V+A ERR+PSLTS MA E LVPILCGRGDKKTK+GKRFKGSYGNARPKKEKKI+RIKDKIEVP STPWPLPFKLI
Subjt:  MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1C4C8 30S ribosomal protein S31, mitochondrial8.9e-41100Show/hide
Query:  MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1F3E9 30S ribosomal protein S31, mitochondrial3.0e-3692.05Show/hide
Query:  MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAMMQWCGAVAR VMA ERR+PSLTS MA E LVPILCGRGDKKTKKGK FKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1GKP4 30S ribosomal protein S31, mitochondrial-like9.5e-3589.53Show/hide
Query:  MMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        M QWCGA+A+RVMA ERR+PSLTS MA E LVPILCGRGDKKTKKGK FKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

SwissProt top hitse value%identityAlignment
O80439 30S ribosomal protein S31, chloroplastic7.6e-0543.64Show/hide
Query:  SPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTP
        S  ++ ++  + CGRGD+KT KGKRF  S+GNARP+ + K  R  +++ VP + P
Subjt:  SPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTP

P47909 30S ribosomal protein S31, mitochondrial2.0e-2168.57Show/hide
Query:  RRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        RR     +P+ +     + CGRGDKKTK+GKRFKGSYGNARPK+EKKI+RIKD++EVP STPWPLPFKLI
Subjt:  RRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

P47910 30S ribosomal protein S31, chloroplastic3.4e-0554.55Show/hide
Query:  SLTSPMAAEALVPIL-CGRGDKKTKKGKRFKGSYGNARPKKEKK
        SL+S ++    +P++ CGRGD+KT KGKRF  S+GNARPK + K
Subjt:  SLTSPMAAEALVPIL-CGRGDKKTKKGKRFKGSYGNARPKKEKK

Q9SJU8 30S ribosomal protein S31, mitochondrial7.8e-2664.29Show/hide
Query:  MAMMQWCGAVARRVMATER---------RAPSLTSPMAAEALVPI-LCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MA MQWCGA+ RR+M T+R         R  SL+   AA A+  + LCGRGDKKTKKGKRFKGSYGN+R KK+K I+RIKDK+E+P STPWPLPFKLI
Subjt:  MAMMQWCGAVARRVMATER---------RAPSLTSPMAAEALVPI-LCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

Arabidopsis top hitse value%identityAlignment
AT2G21290.1 unknown protein5.5e-2764.29Show/hide
Query:  MAMMQWCGAVARRVMATER---------RAPSLTSPMAAEALVPI-LCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MA MQWCGA+ RR+M T+R         R  SL+   AA A+  + LCGRGDKKTKKGKRFKGSYGN+R KK+K I+RIKDK+E+P STPWPLPFKLI
Subjt:  MAMMQWCGAVARRVMATER---------RAPSLTSPMAAEALVPI-LCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

AT2G38140.1 plastid-specific ribosomal protein 45.4e-0643.64Show/hide
Query:  SPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTP
        S  ++ ++  + CGRGD+KT KGKRF  S+GNARP+ + K  R  +++ VP + P
Subjt:  SPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGATGCAGTGGTGCGGCGCTGTAGCTAGGCGAGTGATGGCGACGGAGCGGCGCGCTCCTTCACTAACGTCACCAATGGCGGCCGAAGCTCTGGTGCCGATCCT
GTGTGGACGAGGTGACAAGAAGACCAAAAAGGGGAAGAGATTCAAAGGCTCCTACGGCAACGCCAGGCCGAAGAAGGAGAAGAAGATTCAGCGCATCAAGGATAAAATCG
AGGTTCCTAGTTCCACTCCTTGGCCTCTTCCTTTCAAGCTCATC
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGATGCAGTGGTGCGGCGCTGTAGCTAGGCGAGTGATGGCGACGGAGCGGCGCGCTCCTTCACTAACGTCACCAATGGCGGCCGAAGCTCTGGTGCCGATCCT
GTGTGGACGAGGTGACAAGAAGACCAAAAAGGGGAAGAGATTCAAAGGCTCCTACGGCAACGCCAGGCCGAAGAAGGAGAAGAAGATTCAGCGCATCAAGGATAAAATCG
AGGTTCCTAGTTCCACTCCTTGGCCTCTTCCTTTCAAGCTCATC
Protein sequenceShow/hide protein sequence
MAMMQWCGAVARRVMATERRAPSLTSPMAAEALVPILCGRGDKKTKKGKRFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI