; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022138 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022138
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransmembrane protein
Genome locationscaffold47:1189701..1190087
RNA-Seq ExpressionMS022138
SyntenyMS022138
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049726.1 hypothetical protein E6C27_scaffold76G00740 [Cucumis melo var. makuwa]5.8e-5180.62Show/hide
Query:  MSQYR-RSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEG
        M+ YR R+TADSILDSLSLNP PYPVLLLL VV +FLGASWW SYESAVEAAE+ INW+LFATPVLLI+LVR LSS+DPSFF+SSPW+RRR TH +P EG
Subjt:  MSQYR-RSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEG

Query:  SSPWGVAALIVLLLVLVQFQSAFRESWSI
        +SPWGVAA IVLLLVL+QFQS+FRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSAFRESWSI

KAG6588994.1 hypothetical protein SDJN03_17559, partial [Cucurbita argyrosperma subsp. sororia]5.1e-5586.05Show/hide
Query:  MSQYR-RSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEG
        MS YR R+TADSILDSLSLNPLPYPVLLLL VVF+FLGASWW SYESAVEAAE+QINW+LFATPVLLI+L R LSSVDPS+F+SSPW+RRR TH+LP EG
Subjt:  MSQYR-RSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEG

Query:  SSPWGVAALIVLLLVLVQFQSAFRESWSI
        SSPWGVAALIVLLLVLVQFQS+FRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSAFRESWSI

XP_022136126.1 uncharacterized protein LOC111007895 [Momordica charantia]1.6e-64100Show/hide
Query:  MSQYRRSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEGS
        MSQYRRSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEGS
Subjt:  MSQYRRSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEGS

Query:  SPWGVAALIVLLLVLVQFQSAFRESWSI
        SPWGVAALIVLLLVLVQFQSAFRESWSI
Subjt:  SPWGVAALIVLLLVLVQFQSAFRESWSI

XP_022989070.1 uncharacterized protein LOC111486253 [Cucurbita maxima]3.9e-5586.82Show/hide
Query:  MSQYR-RSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEG
        MS YR R+TADSILDSLSLNPLPYPVLLLL VVF+FLGASWW SYESAVEAAE+QINW+LFATPVLLI+L R LSSVDPSFF+SSPW+RRR TH LP EG
Subjt:  MSQYR-RSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEG

Query:  SSPWGVAALIVLLLVLVQFQSAFRESWSI
        SSPWGVAALIVLLLVLVQFQS+FRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSAFRESWSI

XP_038888316.1 uncharacterized protein LOC120078163 [Benincasa hispida]1.2e-5386.05Show/hide
Query:  MSQYR-RSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEG
        M+ YR R+TADSILDSLSLNP PYPVLLLL VV +FLGASWW SYESAVEAAE+QINW+LFATPVLLIVLVR LSSVDPSFF+SSPW+RRR TH LP EG
Subjt:  MSQYR-RSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEG

Query:  SSPWGVAALIVLLLVLVQFQSAFRESWSI
        SSPWGVAALIVLLLVLVQFQS+FRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSAFRESWSI

TrEMBL top hitse value%identityAlignment
A0A0A0K4L6 Uncharacterized protein6.2e-5179.23Show/hide
Query:  SMSQYR-RSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPE
        SM+ YR R+TADSILDSLSLNP PYPVLLLL VV +FLGASWW SYESAVEAAE+ INW+LFATPVLLI+LVR LSS+DP+FF+SSPW+RRR TH +P E
Subjt:  SMSQYR-RSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPE

Query:  GSSPWGVAALIVLLLVLVQFQSAFRESWSI
        G+SPWGVAA I+LLLVL+QFQS+FRESWSI
Subjt:  GSSPWGVAALIVLLLVLVQFQSAFRESWSI

A0A5A7U6E4 Uncharacterized protein2.8e-5180.62Show/hide
Query:  MSQYR-RSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEG
        M+ YR R+TADSILDSLSLNP PYPVLLLL VV +FLGASWW SYESAVEAAE+ INW+LFATPVLLI+LVR LSS+DPSFF+SSPW+RRR TH +P EG
Subjt:  MSQYR-RSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEG

Query:  SSPWGVAALIVLLLVLVQFQSAFRESWSI
        +SPWGVAA IVLLLVL+QFQS+FRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSAFRESWSI

A0A6J1C2N0 uncharacterized protein LOC1110078957.6e-65100Show/hide
Query:  MSQYRRSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEGS
        MSQYRRSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEGS
Subjt:  MSQYRRSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEGS

Query:  SPWGVAALIVLLLVLVQFQSAFRESWSI
        SPWGVAALIVLLLVLVQFQSAFRESWSI
Subjt:  SPWGVAALIVLLLVLVQFQSAFRESWSI

A0A6J1JLC4 uncharacterized protein LOC1114862531.9e-5586.82Show/hide
Query:  MSQYR-RSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEG
        MS YR R+TADSILDSLSLNPLPYPVLLLL VVF+FLGASWW SYESAVEAAE+QINW+LFATPVLLI+L R LSSVDPSFF+SSPW+RRR TH LP EG
Subjt:  MSQYR-RSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEG

Query:  SSPWGVAALIVLLLVLVQFQSAFRESWSI
        SSPWGVAALIVLLLVLVQFQS+FRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSAFRESWSI

A0A7N2MZW5 Uncharacterized protein1.0e-4066.14Show/hide
Query:  YRRSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVD-PSF-FASSPWERRRSTHRLPPEGSS
        YRRSTA SI D+ SLNPLPYPVLL+L V+ +FLG SW+FSYE AVE+AEEQ+ WLL ATP++L++LVR LSS++ P+F F+ SPW++RR TH  P EGSS
Subjt:  YRRSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVD-PSF-FASSPWERRRSTHRLPPEGSS

Query:  PWGVAALIVLLLVLVQFQSAFRESWSI
        PWGVAALIVLLLV+VQ++S F + W +
Subjt:  PWGVAALIVLLLVLVQFQSAFRESWSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein1.0e-2959.84Show/hide
Query:  SILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVD-PSFFASSPWERRRSTHRLP----PEGSSPWGV
        SILDS SL+PLPYPVLL+L V  VFL +SW+FS E A E+AEEQIN+ L   P+ LIVLVR LSS++ P          RR+T+  P      GSSPWGV
Subjt:  SILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVD-PSFFASSPWERRRSTHRLP----PEGSSPWGV

Query:  AALIVLLLVLVQFQSAFRESWS
        AALIVLLLVL+Q+QS+F E WS
Subjt:  AALIVLLLVLVQFQSAFRESWS

AT2G31940.1 unknown protein1.4e-1032.73Show/hide
Query:  PLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLS---SVDPSFFASSPWERRRSTHRLPPEGSSPWGVAALIVLLLVLV
        P+P  + + + ++ +F+  SW+ SYE  +E    Q    L A+P+LL++ V  LS    V     +      R S +R    G +PWGVA ++V L  +V
Subjt:  PLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLS---SVDPSFFASSPWERRRSTHRLPPEGSSPWGVAALIVLLLVLV

Query:  QFQSAFRESW
         +QS F+E W
Subjt:  QFQSAFRESW

AT5G19875.1 unknown protein9.3e-1541.38Show/hide
Query:  SILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEGSSPWGVAALIV
        S LD LSL P P+   L + VVF  L  +W+ ++ES +E   + +  +   TP+ L++LV   S    SF+   PW  + S HR    GSSPWGVAA++V
Subjt:  SILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEGSSPWGVAALIV

Query:  LLLVLVQFQSAFRESW
        L+L +V +QS F+E W
Subjt:  LLLVLVQFQSAFRESW

AT5G42146.1 unknown protein1.7e-0832.38Show/hide
Query:  PYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEGSSPWGVAALIVLLLVLVQFQSA
        P  +L LL ++ + L  S +  Y+  VE     +   +   P+L + ++  LS V    F SS   R      L  EG+ PWGV  +++LLL+LV  QS 
Subjt:  PYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEGSSPWGVAALIVLLLVLVQFQSA

Query:  FRESW
        F   W
Subjt:  FRESW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAATGAGCCAATACAGAAGAAGCACCGCCGATTCGATCCTCGATTCGCTGTCGCTGAATCCTCTCCCGTACCCGGTGCTGCTCCTCCTCGGCGTTGTCTTTGTCTTCCT
CGGCGCCTCCTGGTGGTTCTCGTACGAGTCCGCCGTCGAGGCCGCCGAGGAGCAGATCAATTGGCTGCTCTTCGCGACGCCGGTGCTGCTGATCGTCCTCGTCCGCTGCC
TCTCCTCCGTCGATCCGAGCTTCTTCGCTTCCTCGCCGTGGGAGCGCCGCCGCAGCACGCACCGCCTGCCGCCCGAGGGGAGCTCGCCGTGGGGCGTCGCGGCGTTGATC
GTGCTGCTGCTCGTTCTCGTGCAGTTCCAGTCCGCGTTCCGTGAGAGCTGGTCCATT
mRNA sequenceShow/hide mRNA sequence
TCAATGAGCCAATACAGAAGAAGCACCGCCGATTCGATCCTCGATTCGCTGTCGCTGAATCCTCTCCCGTACCCGGTGCTGCTCCTCCTCGGCGTTGTCTTTGTCTTCCT
CGGCGCCTCCTGGTGGTTCTCGTACGAGTCCGCCGTCGAGGCCGCCGAGGAGCAGATCAATTGGCTGCTCTTCGCGACGCCGGTGCTGCTGATCGTCCTCGTCCGCTGCC
TCTCCTCCGTCGATCCGAGCTTCTTCGCTTCCTCGCCGTGGGAGCGCCGCCGCAGCACGCACCGCCTGCCGCCCGAGGGGAGCTCGCCGTGGGGCGTCGCGGCGTTGATC
GTGCTGCTGCTCGTTCTCGTGCAGTTCCAGTCCGCGTTCCGTGAGAGCTGGTCCATT
Protein sequenceShow/hide protein sequence
SMSQYRRSTADSILDSLSLNPLPYPVLLLLGVVFVFLGASWWFSYESAVEAAEEQINWLLFATPVLLIVLVRCLSSVDPSFFASSPWERRRSTHRLPPEGSSPWGVAALI
VLLLVLVQFQSAFRESWSI