; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022140 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022140
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSignal sequence receptor subunit alpha
Genome locationscaffold47:1196638..1199598
RNA-Seq ExpressionMS022140
SyntenyMS022140
Gene Ontology termsGO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005595 - Translocon-associated protein (TRAP), alpha subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572098.1 Translocon-associated protein subunit alpha, partial [Cucurbita argyrosperma subsp. sororia]1.8e-11285.16Show/hide
Query:  FTLFFICFTV--------ATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI
        F +FF+   +        ATCQSDSD E+SE VEEASDLG+VGEEDSQDFGEVNF PAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLN+IAI
Subjt:  FTLFFICFTV--------ATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI

Query:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL
        KASVHYTFDH MLIQNLTGQVFHNATV PSTQA++PYIFAVSKFLQPGNFDLVGTIFYE+DQ AYQSVFFNGTIEVVEASG+IS+E+VFLVTLGIALLVL
Subjt:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL

Query:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        LGLWIHGQIQQKLSKK KR ASKVEVGTKT+DTSMDEWLQGTA+ +S S+KSKKKN
Subjt:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

XP_004144834.1 translocon-associated protein subunit alpha [Cucumis sativus]1.1e-11183.98Show/hide
Query:  FTLFFICFTV--------ATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI
        F LFF+   +        ATCQSDSD E+SE VE+ SDLGIVG+EDSQDFGEVNF PAPGVDTVCVFPKNSARIVPAGEET+LLAGVKN+GESSLNIIAI
Subjt:  FTLFFICFTV--------ATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI

Query:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL
        KAS+HYTFDH MLIQNLTGQVFHNATV PSTQA++PYIFAVSK+LQPGNFDLVGTIFYE+DQNAYQS+F+NGTIEVVEASG+IS+ESVFLV+LGIALLVL
Subjt:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL

Query:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        L LWIHGQIQQKLSKK KRAASKVEVGTKTVDTSMDEWLQGTAY +S SNK KKKN
Subjt:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

XP_022135777.1 translocon-associated protein subunit alpha-like [Momordica charantia]1.8e-12594.53Show/hide
Query:  FTLFFIC--------FTVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI
        F++FF+         F VATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI
Subjt:  FTLFFIC--------FTVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI

Query:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL
        KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEV+QNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL
Subjt:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL

Query:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
Subjt:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

XP_022952473.1 translocon-associated protein subunit alpha-like [Cucurbita moschata]1.0e-11285.55Show/hide
Query:  FTLFFICFTV--------ATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI
        F +FF+   +        ATCQSDSD E+SEVVEEASDLG+VGEEDSQDFGEVNF PAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLN+IAI
Subjt:  FTLFFICFTV--------ATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI

Query:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL
        KASVHYTFDH MLIQNLTGQVFHNATV PSTQA++PYIFAVSKFLQPGNFDLVGTIFYE+DQ AYQSVFFNGTIEVVEASG+IS+E+VFLVTLGIALLVL
Subjt:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL

Query:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        LGLWIHGQIQQKLSKK KR ASKVEVGTKT+DTSMDEWLQGTA+ +S S+KSKKKN
Subjt:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

XP_038886848.1 translocon-associated protein subunit alpha-like [Benincasa hispida]3.2e-11485.94Show/hide
Query:  FTLFFICFTV--------ATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI
        F +FF+ F +        ATCQSDSD E+SE VEE SDLGIVGEEDSQDFGEVNF PAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI
Subjt:  FTLFFICFTV--------ATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI

Query:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL
        KAS+HYTFDH +LIQNLTGQVFHNATV PSTQAT+PY+FAVSKFLQPGNFDLVGTIFYE+DQNAYQS+F+NGTIEVVEASG+ISIESVFLVTLGIALLVL
Subjt:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL

Query:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        L LWIHGQIQQKLSKK KR ASKVEVGTKTVDTSMDEWLQGTAY +S S+KSKKKN
Subjt:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

TrEMBL top hitse value%identityAlignment
A0A0A0K182 Signal sequence receptor subunit alpha5.5e-11283.98Show/hide
Query:  FTLFFICFTV--------ATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI
        F LFF+   +        ATCQSDSD E+SE VE+ SDLGIVG+EDSQDFGEVNF PAPGVDTVCVFPKNSARIVPAGEET+LLAGVKN+GESSLNIIAI
Subjt:  FTLFFICFTV--------ATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI

Query:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL
        KAS+HYTFDH MLIQNLTGQVFHNATV PSTQA++PYIFAVSK+LQPGNFDLVGTIFYE+DQNAYQS+F+NGTIEVVEASG+IS+ESVFLV+LGIALLVL
Subjt:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL

Query:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        L LWIHGQIQQKLSKK KRAASKVEVGTKTVDTSMDEWLQGTAY +S SNK KKKN
Subjt:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

A0A5A7U5T4 Signal sequence receptor subunit alpha1.2e-11188.24Show/hide
Query:  ATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLIQNLT
        ATCQ+DSD E SE VEE SDLGIVG+EDSQDFGEVNF PAPGVDTVCVFPKNSARIVPAGEET+LLAGVKNDGESSLNIIAIKAS+HYTFDH MLIQNLT
Subjt:  ATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLIQNLT

Query:  GQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVLLGLWIHGQIQQKLSKKTK
        GQVFHNATV PS QA++PYIFAVSK+LQPGNFDLVGTIFYE+DQNAYQS+F+NGTIEVVEASG+IS+ESVFLV+LGIALLVLL LWIHGQIQQKLSKK K
Subjt:  GQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVLLGLWIHGQIQQKLSKKTK

Query:  RAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        RAASKVEVGTKT+DTSMDEWLQGTAY +S SNK KKKN
Subjt:  RAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

A0A6J1C3Q7 Signal sequence receptor subunit alpha8.8e-12694.53Show/hide
Query:  FTLFFIC--------FTVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI
        F++FF+         F VATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI
Subjt:  FTLFFIC--------FTVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI

Query:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL
        KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEV+QNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL
Subjt:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL

Query:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
Subjt:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

A0A6J1GKP1 Signal sequence receptor subunit alpha5.0e-11385.55Show/hide
Query:  FTLFFICFTV--------ATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI
        F +FF+   +        ATCQSDSD E+SEVVEEASDLG+VGEEDSQDFGEVNF PAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLN+IAI
Subjt:  FTLFFICFTV--------ATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI

Query:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL
        KASVHYTFDH MLIQNLTGQVFHNATV PSTQA++PYIFAVSKFLQPGNFDLVGTIFYE+DQ AYQSVFFNGTIEVVEASG+IS+E+VFLVTLGIALLVL
Subjt:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL

Query:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        LGLWIHGQIQQKLSKK KR ASKVEVGTKT+DTSMDEWLQGTA+ +S S+KSKKKN
Subjt:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

A0A6J1I2T7 Signal sequence receptor subunit alpha9.4e-11285.16Show/hide
Query:  FTLFFICFTV--------ATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI
        F +FF+   +        AT QSDSD E+SE VEEASDLG+VGEEDSQDFGEVNF PAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI
Subjt:  FTLFFICFTV--------ATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI

Query:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL
        KASVHYTFDH MLIQNLTGQVFHNATV PSTQA++PYIFAVSKFLQPGNFDLVGTIFYE+DQ AYQSVFFNGTIEVVEASG+IS+E+VFLVTLGIALLVL
Subjt:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL

Query:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN
        LGLWIHGQIQQKLSKK KR ASKVEVGTKT+DTSMDEWLQGTA+ +S S+KSKKKN
Subjt:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN

SwissProt top hitse value%identityAlignment
A6QLP7 Translocon-associated protein subunit alpha8.8e-1430.97Show/hide
Query:  DSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLIQNLTGQVFH
        D D E     +E +DL    EED    GE     +P  DT  +F K      PA    + L G  N G     + ++ AS  Y  D+   IQN T     
Subjt:  DSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLIQNLTGQVFH

Query:  NATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFY-EVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTL--GIALLVLLGLWIHGQIQQKLSKKTKRA
        N  V P  QATF Y F  ++ +    F LV  + Y +++ N +Q   FN T+ ++E    +  E++F+     G+ LLV++GL  H  ++   S+K KR 
Subjt:  NATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFY-EVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTL--GIALLVLLGLWIHGQIQQKLSKKTKRA

Query:  ASKVEVGTKTVDTSMDEWLQGTAYNQ
          KVE+GT + +     W+     NQ
Subjt:  ASKVEVGTKTVDTSMDEWLQGTAYNQ

P16967 Translocon-associated protein subunit alpha6.7e-1430.17Show/hide
Query:  VATCQSDSDSETSE--VVEEASDLGIVGEEDSQDFGE------VNFAP--APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYT
        VA      D ET E  ++E+  D   V E++  D  E      V+  P  +P  DT  +F K      PA    + L G  N G     + ++ AS  Y 
Subjt:  VATCQSDSDSETSE--VVEEASDLGIVGEEDSQDFGE------VNFAP--APGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYT

Query:  FDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFY-EVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTL--GIALLVLLGLW
         D+   IQN T     N  V P  QATF Y F  ++ +    F LV  + Y +++ N +Q   FN T+ ++E    +  E++F+     G+ LLV++GL 
Subjt:  FDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFY-EVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTL--GIALLVLLGLW

Query:  IHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQ
         H  ++   S+K KR   KVE+GT + +     W+     NQ
Subjt:  IHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQ

P43307 Translocon-associated protein subunit alpha8.8e-1430.53Show/hide
Query:  DSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLIQNLTGQVFH
        D D E     +E +DL +  +E+    GE     +P  DT  +F K      PA    + L G  N G     + ++ AS  Y  D+   IQN T     
Subjt:  DSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLIQNLTGQVFH

Query:  NATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFY-EVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTL--GIALLVLLGLWIHGQIQQKLSKKTKRA
        N  V P  QATF Y F  ++ +    F LV  + Y +++ N +Q   FN T+ V+E    +  E++F+     G+ LLV++GL  H  ++   S+K KR 
Subjt:  NATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFY-EVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTL--GIALLVLLGLWIHGQIQQKLSKKTKRA

Query:  ASKVEVGTKTVDTSMDEWLQGTAYNQ
          KVE+GT + +     W+     NQ
Subjt:  ASKVEVGTKTVDTSMDEWLQGTAYNQ

P45434 Translocon-associated protein subunit alpha1.5e-6656.85Show/hide
Query:  VATCQSDSDSETS---EVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLI
        VA CQSD++  +S   +VV E +D  +  EED  D  ++N +  PGV+TVCVFPKNSA++VPAGEETELL G+KN+G++ + ++ I+ASVH  +DH +L+
Subjt:  VATCQSDSDSETS---EVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLI

Query:  QNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVLLGLWIHGQIQQKLS
        QNLT    +NA++  S QATFPYIFAVS++LQPG FDLVG I Y+V+   YQSVF+NGTIEVVE+ G++S ESVFL+TLGI LL+LLGLW + Q+ Q+L+
Subjt:  QNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVLLGLWIHGQIQQKLS

Query:  KKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKK
        KKTK+  SKVEVGT++ + S+DEWL+GT   ++ S K+K K
Subjt:  KKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKK

Q54R45 Translocon-associated protein subunit alpha4.2e-1629.7Show/hide
Query:  VNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDL
        V   P   V    +FP N  +   AG   E+L G  N+ + +LNI  I AS+++  D  + IQN T   F    V     AT  Y F  S++L+P  F L
Subjt:  VNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDL

Query:  VGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKS
        + ++ Y+     +   FFN TI + E      ++S FL+ LG+  +  +G  ++G++ ++   +T    +K  V  +T D +  EWL GT+   S+    
Subjt:  VGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVLLGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKS

Query:  KK
        +K
Subjt:  KK

Arabidopsis top hitse value%identityAlignment
AT2G16595.1 Translocon-associated protein (TRAP), alpha subunit5.9e-5851.76Show/hide
Query:  FTLFFICF--------TVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI
        F L F  F         VA CQSDS+    EV    SD+G   E D+++   +    APG++T+CVFPKNSA+I+ AG ETELL G+KNDG+S+++I+A+
Subjt:  FTLFFICF--------TVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAI

Query:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL
        K S+H  FD +  +QNLT   F NA+V  S QAT PY FAVSKFLQ G FD VGTI YE+D   YQS+F+NGTIEVVE   +  +ESVFL  L I ++  
Subjt:  KASVHYTFDHHMLIQNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVL

Query:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKK
        L ++I   + + ++KKTKR A KVEVGT T D S DEWL+GT+Y QS S   KKK
Subjt:  LGLWIHGQIQQKLSKKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKK

AT2G21160.1 Translocon-associated protein (TRAP), alpha subunit1.1e-6756.85Show/hide
Query:  VATCQSDSDSETS---EVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLI
        VA CQSD++  +S   +VV E +D  +  EED  D  ++N +  PGV+TVCVFPKNSA++VPAGEETELL G+KN+G++ + ++ I+ASVH  +DH +L+
Subjt:  VATCQSDSDSETS---EVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLI

Query:  QNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVLLGLWIHGQIQQKLS
        QNLT    +NA++  S QATFPYIFAVS++LQPG FDLVG I Y+V+   YQSVF+NGTIEVVE+ G++S ESVFL+TLGI LL+LLGLW + Q+ Q+L+
Subjt:  QNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVLLGLWIHGQIQQKLS

Query:  KKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKK
        KKTK+  SKVEVGT++ + S+DEWL+GT   ++ S K+K K
Subjt:  KKTKRAASKVEVGTKTVDTSMDEWLQGTAYNQSQSNKSKKK

AT2G21160.2 Translocon-associated protein (TRAP), alpha subunit1.4e-4656.89Show/hide
Query:  VATCQSDSDSETS---EVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLI
        VA CQSD++  +S   +VV E +D  +  EED  D  ++N +  PGV+TVCVFPKNSA++VPAGEETELL G+KN+G++ + ++ I+ASVH  +DH +L+
Subjt:  VATCQSDSDSETS---EVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLI

Query:  QNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASG
        QNLT    +NA++  S QATFPYIFAVS++LQPG FDLVG I Y+V+   YQSVF+NGTIEVVE+ G
Subjt:  QNLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGGGTTATTTTACTTTGTTTTTTATTTGCTTTACAGTTGCAACGTGCCAGTCGGACTCTGATAGCGAAACATCTGAGGTTGTTGAAGAAGCTAGCGATCTTGGAATTGT
GGGTGAAGAAGATTCCCAGGATTTTGGAGAAGTGAATTTTGCTCCAGCTCCCGGAGTTGATACTGTCTGTGTTTTTCCAAAGAATAGTGCACGCATAGTGCCTGCTGGAG
AAGAGACTGAACTTCTCGCTGGAGTGAAAAATGATGGTGAATCAAGCTTGAATATTATAGCTATTAAGGCCAGCGTTCATTATACCTTTGATCATCATATGTTGATTCAA
AATCTTACTGGACAGGTCTTCCACAACGCAACGGTGCACCCATCAACTCAAGCTACTTTCCCATACATATTTGCTGTCAGCAAGTTTTTGCAGCCTGGAAACTTTGATCT
AGTGGGCACCATATTTTATGAAGTAGACCAGAATGCATATCAAAGCGTATTCTTTAATGGTACTATTGAAGTCGTTGAAGCTAGTGGTGTCATCAGCATCGAGTCTGTGT
TTTTAGTTACTCTTGGAATTGCCCTTCTCGTCCTGCTGGGCTTATGGATTCATGGTCAAATACAGCAAAAACTCTCAAAGAAAACCAAGAGGGCTGCTTCGAAGGTTGAA
GTGGGAACGAAAACTGTAGATACCTCAATGGATGAATGGCTTCAGGGAACTGCATACAACCAGTCCCAATCAAACAAGTCAAAGAAAAAGAAT
mRNA sequenceShow/hide mRNA sequence
GCGGGTTATTTTACTTTGTTTTTTATTTGCTTTACAGTTGCAACGTGCCAGTCGGACTCTGATAGCGAAACATCTGAGGTTGTTGAAGAAGCTAGCGATCTTGGAATTGT
GGGTGAAGAAGATTCCCAGGATTTTGGAGAAGTGAATTTTGCTCCAGCTCCCGGAGTTGATACTGTCTGTGTTTTTCCAAAGAATAGTGCACGCATAGTGCCTGCTGGAG
AAGAGACTGAACTTCTCGCTGGAGTGAAAAATGATGGTGAATCAAGCTTGAATATTATAGCTATTAAGGCCAGCGTTCATTATACCTTTGATCATCATATGTTGATTCAA
AATCTTACTGGACAGGTCTTCCACAACGCAACGGTGCACCCATCAACTCAAGCTACTTTCCCATACATATTTGCTGTCAGCAAGTTTTTGCAGCCTGGAAACTTTGATCT
AGTGGGCACCATATTTTATGAAGTAGACCAGAATGCATATCAAAGCGTATTCTTTAATGGTACTATTGAAGTCGTTGAAGCTAGTGGTGTCATCAGCATCGAGTCTGTGT
TTTTAGTTACTCTTGGAATTGCCCTTCTCGTCCTGCTGGGCTTATGGATTCATGGTCAAATACAGCAAAAACTCTCAAAGAAAACCAAGAGGGCTGCTTCGAAGGTTGAA
GTGGGAACGAAAACTGTAGATACCTCAATGGATGAATGGCTTCAGGGAACTGCATACAACCAGTCCCAATCAAACAAGTCAAAGAAAAAGAAT
Protein sequenceShow/hide protein sequence
AGYFTLFFICFTVATCQSDSDSETSEVVEEASDLGIVGEEDSQDFGEVNFAPAPGVDTVCVFPKNSARIVPAGEETELLAGVKNDGESSLNIIAIKASVHYTFDHHMLIQ
NLTGQVFHNATVHPSTQATFPYIFAVSKFLQPGNFDLVGTIFYEVDQNAYQSVFFNGTIEVVEASGVISIESVFLVTLGIALLVLLGLWIHGQIQQKLSKKTKRAASKVE
VGTKTVDTSMDEWLQGTAYNQSQSNKSKKKN