CuGenDBv2

Gene ID	MS022177
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein translocase complex, SecE/Sec61-gamma subunit
Genome location	scaffold47:1439975..1440726
RNA-Seq Expression	MS022177
Synteny	MS022177
Gene Ontology terms	GO:0006605 - protein targeting (biological process) GO:0071806 - protein transmembrane transport (biological process) GO:0090351 - seedling development (biological process) GO:0009528 - plastid inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit IPR038379 - SecE superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004144859.1 uncharacterized protein LOC101211352 isoform X2 [Cucumis sativus]

3.0e-49

74.83

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Query:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSG-HLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQL
        IG+IC P  K+P H+L  NT R NKS+ FQ+L   IS+RSG HLYAGRM FNHAA  +   Q SFN+E PPEPF LSLI+E  WGLRSLLIFLVEQPSQL
Subjt:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSG-HLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQL

Query:  KYIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRS
        KYIEWPSFQSTLKTATL LVLVALLIVALSSVDSALSY+LTL+LRR+
Subjt:  KYIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRS

XP_022136339.1 uncharacterized protein LOC111008049 [Momordica charantia]

1.3e-73

99.32

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Query:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSGHLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLK
        IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSGHLYAGRMSFNHAASGRENHQL+FNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLK
Subjt:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSGHLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLK

Query:  YIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST
        YIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST
Subjt:  YIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST

XP_022928229.1 uncharacterized protein LOC111435124 [Cucurbita moschata]

6.6e-49

72.11

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Query:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSGHLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLK
        IGM   PH  +P H+ + NT R NK+N FQ LP  ISRR GHLYA RM FNHAASGR+N QL FN+E PPEPF L +I+E +WGLRSL IFL EQPSQLK
Subjt:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSGHLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLK

Query:  YIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST
        YIEWPSFQSTLKTAT  LVLVALLIVALSSVDS LSYILT +LRR++
Subjt:  YIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST

XP_023529805.1 uncharacterized protein LOC111792519 [Cucurbita pepo subsp. pepo]

4.6e-50

73.47

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Query:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSGHLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLK
        IGM   PH  +P H+ + NT RFNK+N FQ LP  ISRRSGHLYA RM FNHAASGR+N QL FN+E PPEPF L +I+E +WGLRSL IFL EQPSQLK
Subjt:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSGHLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLK

Query:  YIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST
        YIEWPSFQSTLKTAT  LVLVALLIVALSSVDS LSYILT +LRR++
Subjt:  YIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST

XP_038888680.1 uncharacterized protein LOC120078486 [Benincasa hispida]

9.8e-53

75.68

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Query:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSG-HLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQL
        IG +C P  K+P H+LH NT RFNKS   Q+L   IS+R+G H+YAGRM FNHAASG++N QLSFN+E+PPEPF LSLI+E +WGLRSLLIFL EQPSQL
Subjt:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSG-HLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQL

Query:  KYIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST
        KYIEWPSFQSTLKTATL LVLVALLIVALSSVDSALSYILTL LRR++
Subjt:  KYIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K1C8 Uncharacterized protein

1.4e-49

74.83

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Query:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSG-HLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQL
        IG+IC P  K+P H+L  NT R NKS+ FQ+L   IS+RSG HLYAGRM FNHAA  +   Q SFN+E PPEPF LSLI+E  WGLRSLLIFLVEQPSQL
Subjt:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSG-HLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQL

Query:  KYIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRS
        KYIEWPSFQSTLKTATL LVLVALLIVALSSVDSALSY+LTL+LRR+
Subjt:  KYIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRS

A0A1S3BJG9 uncharacterized protein LOC103490269

3.5e-48

74.32

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Query:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSG-HLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQL
        IG+IC P PK   H+L  N  R NKS+ FQ+L   IS+RSG HLYAGRM FNHAASG+   Q SFN+E+P EPF LSLI+E  WGLRSLLIFLVEQPSQL
Subjt:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSG-HLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQL

Query:  KYIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST
        KYIEWPSFQSTLKTATL LVLVALLIVALSSVDSALSY+LTL+LRR++
Subjt:  KYIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST

A0A5A7SIK1 Protein translocase complex, SecE/Sec61-gamma subunit

3.5e-48

74.32

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Query:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSG-HLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQL
        IG+IC P PK   H+L  N  R NKS+ FQ+L   IS+RSG HLYAGRM FNHAASG+   Q SFN+E+P EPF LSLI+E  WGLRSLLIFLVEQPSQL
Subjt:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSG-HLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQL

Query:  KYIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST
        KYIEWPSFQSTLKTATL LVLVALLIVALSSVDSALSY+LTL+LRR++
Subjt:  KYIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST

A0A6J1C3M0 uncharacterized protein LOC111008049

6.4e-74

99.32

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Query:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSGHLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLK
        IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSGHLYAGRMSFNHAASGRENHQL+FNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLK
Subjt:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSGHLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLK

Query:  YIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST
        YIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST
Subjt:  YIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST

A0A6J1EK97 uncharacterized protein LOC111435124

3.2e-49

72.11

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Query:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSGHLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLK
        IGM   PH  +P H+ + NT R NK+N FQ LP  ISRR GHLYA RM FNHAASGR+N QL FN+E PPEPF L +I+E +WGLRSL IFL EQPSQLK
Subjt:  IGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSGHLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLK

Query:  YIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST
        YIEWPSFQSTLKTAT  LVLVALLIVALSSVDS LSYILT +LRR++
Subjt:  YIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G38490.1 unknown protein

4.3e-22

55.05

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Query:  GRMSFNH-------AASGRENHQLSFNEEYP-PEPFMLSLIREGIWGLRSLLIFLVEQPSQLKYIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSY
        GR+S  H        + G      S +++ P  EP  LSL+R+ +W  RSLL F+ EQPSQLKYIEWP+F STLKTATL+L LVA+ IVALSSVD+AL Y
Subjt:  GRMSFNH-------AASGRENHQLSFNEEYP-PEPFMLSLIREGIWGLRSLLIFLVEQPSQLKYIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSY

Query:  ILTLVLRRS
        IL L+LR++
Subjt:  ILTLVLRRS

Sequences

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CDS sequence

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TTTTTCTCCCGTTTTCTTGTTCTTAAATCCATAGGTATGATTTGCTCTCCTCATCCCAAGCAACCACTCCACATTCTACATATAAACACACCCAGATTCAACAAGTCCAA
TGATTTTCAAAAACTGCCCAAAGGGATTTCCAGGAGGAGTGGACATCTCTATGCTGGTCGAATGAGCTTTAACCATGCTGCATCTGGAAGAGAAAATCACCAACTGAGCT
TCAATGAGGAATATCCTCCAGAACCTTTCATGTTGAGTCTAATTCGAGAAGGCATTTGGGGATTGAGATCGTTGTTGATATTTCTGGTGGAGCAGCCCAGTCAACTGAAG
TACATAGAATGGCCTAGCTTTCAAAGCACGCTGAAGACTGCTACATTAACACTCGTTCTCGTTGCACTGTTGATTGTGGCACTCTCATCAGTGGACTCGGCCCTCAGCTA
CATTTTGACTTTAGTTCTCAGAAGAAGCACA

mRNA sequence

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Protein sequence

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FFSRFLVLKSIGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSGHLYAGRMSFNHAASGRENHQLSFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLK
YIEWPSFQSTLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST

MS022177 (gene) of Bitter gourd (TR) v1 genome