; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022184 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022184
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold47:1492598..1492966
RNA-Seq ExpressionMS022184
SyntenyMS022184
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025124.1 hypothetical protein E6C27_scaffold124G00220 [Cucumis melo var. makuwa]5.5e-4378.12Show/hide
Query:  MLEGKQMASPNGAFRRLFRPRCRKNARANSLLEAIAKAS---TGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGG---GGGGGDVASPPVSVEQRLAFV
        M+EGKQ+ SPNG FRRLFR RCRK+A+AN LLEAIAKAS   TG VS SEE+G+VRIKMVV+KTDLAQ LEAMGGG   GGGGG VA+  VS+EQRLA V
Subjt:  MLEGKQMASPNGAFRRLFRPRCRKNARANSLLEAIAKAS---TGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGG---GGGGGDVASPPVSVEQRLAFV

Query:  RRKNLLRAKLAAATWSPALQSIPEEMDS
        RRK LLRAKLAAATWSPALQSIPEE+DS
Subjt:  RRKNLLRAKLAAATWSPALQSIPEEMDS

KAG6572129.1 hypothetical protein SDJN03_28857, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3875.81Show/hide
Query:  MLEGKQMASPNGAFRRLFRPRCRKNARANSLLEAIAKAS---TGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGGDVASPPVSVEQRLAFVRRK
        M++GKQ ASPNGAFRRLFR R RKNA+A++LLEAIAK S   TG VSQ+EEDG+VRIKMVV+KTDLAQ LEA+ GGGGGGG VA   VSVE RLA +RRK
Subjt:  MLEGKQMASPNGAFRRLFRPRCRKNARANSLLEAIAKAS---TGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGGDVASPPVSVEQRLAFVRRK

Query:  NLLRAKLAAATWSPALQSIPEEMD
          LRAKLAAATWSPALQSIPE  D
Subjt:  NLLRAKLAAATWSPALQSIPEEMD

KGN43274.1 hypothetical protein Csa_020212 [Cucumis sativus]1.2e-4075.2Show/hide
Query:  MLEGKQMASPNGAFRRLFRPRCRKNARANSLLEAIAKAS---TGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGGDVASPPVSVEQRLAFVRRK
        M+EGKQ+ASPNG FRRLFR RCRK+A+AN LLEAIAKAS    G VS SEE+G+VRIKMVV+KTDL Q LEAMGGG GGGG VA   VS+E RL  +RRK
Subjt:  MLEGKQMASPNGAFRRLFRPRCRKNARANSLLEAIAKAS---TGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGGDVASPPVSVEQRLAFVRRK

Query:  NLLRAKLAAATWSPALQSIPEEMDS
          LRAKLAAATWSPALQSIPEE+DS
Subjt:  NLLRAKLAAATWSPALQSIPEEMDS

PON89926.1 hypothetical protein TorRG33x02_142120 [Trema orientale]1.5e-1651.15Show/hide
Query:  GKQMASP--NGAFRRLFRPRCRK---NARANSLLEAIAKASTGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGG----DVASPPVSVEQRLAFV
        G   ASP  +    RL R R  +   N R+N LL+AIAK S G VSQ+EEDG+VR+K+VVRK DL Q LE MGG   G G       SP  S EQRL+ +
Subjt:  GKQMASP--NGAFRRLFRPRCRK---NARANSLLEAIAKASTGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGG----DVASPPVSVEQRLAFV

Query:  RRKN-LLRAKLA----AATWSPALQSIPEEM
        R+K+ L+RA LA     ++WSP LQSIPEE+
Subjt:  RRKN-LLRAKLA----AATWSPALQSIPEEM

XP_023511743.1 uncharacterized protein LOC111776510 [Cucurbita pepo subsp. pepo]3.0e-4178.4Show/hide
Query:  MLEGKQMASPNGAFRRLFRPRCRKNARANSLLEAIAKAS---TGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGGDVASPPVSVEQRLAFVRRK
        M++GKQ ASPNGAFRRLFR R RKNA+A++LLEAIAK S   TG VSQ+EEDG+VRIKMVV+KTDLAQ LEAM GGGGGGG VA   VSVEQRLA +RRK
Subjt:  MLEGKQMASPNGAFRRLFRPRCRKNARANSLLEAIAKAS---TGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGGDVASPPVSVEQRLAFVRRK

Query:  NLLRAKLAAATWSPALQSIPEEMDS
          LRAKLAAATWSPALQSIPEE+DS
Subjt:  NLLRAKLAAATWSPALQSIPEEMDS

TrEMBL top hitse value%identityAlignment
A0A0A0K2L8 Uncharacterized protein5.6e-4175.2Show/hide
Query:  MLEGKQMASPNGAFRRLFRPRCRKNARANSLLEAIAKAS---TGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGGDVASPPVSVEQRLAFVRRK
        M+EGKQ+ASPNG FRRLFR RCRK+A+AN LLEAIAKAS    G VS SEE+G+VRIKMVV+KTDL Q LEAMGGG GGGG VA   VS+E RL  +RRK
Subjt:  MLEGKQMASPNGAFRRLFRPRCRKNARANSLLEAIAKAS---TGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGGDVASPPVSVEQRLAFVRRK

Query:  NLLRAKLAAATWSPALQSIPEEMDS
          LRAKLAAATWSPALQSIPEE+DS
Subjt:  NLLRAKLAAATWSPALQSIPEEMDS

A0A2P5B8E1 Uncharacterized protein6.2e-1650Show/hide
Query:  GKQMASP--NGAFRRLFRPRCRK--NARANSLLEAIAKASTGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGG----DVASPPVSVEQRLAFVR
        G   ASP  +    RL R R ++  N R+N LL+ IAK S G VSQ+EEDG+VR+K+VVRK DL Q LE MGG   G         SP  S EQRL+ +R
Subjt:  GKQMASP--NGAFRRLFRPRCRK--NARANSLLEAIAKASTGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGG----DVASPPVSVEQRLAFVR

Query:  RKN-LLRAKLA----AATWSPALQSIPEEM
        +K+ L+RA LA     ++WSP LQSIPEE+
Subjt:  RKN-LLRAKLA----AATWSPALQSIPEEM

A0A2P5EWK1 Uncharacterized protein7.3e-1751.15Show/hide
Query:  GKQMASP--NGAFRRLFRPRCRK---NARANSLLEAIAKASTGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGG----DVASPPVSVEQRLAFV
        G   ASP  +    RL R R  +   N R+N LL+AIAK S G VSQ+EEDG+VR+K+VVRK DL Q LE MGG   G G       SP  S EQRL+ +
Subjt:  GKQMASP--NGAFRRLFRPRCRK---NARANSLLEAIAKASTGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGG----DVASPPVSVEQRLAFV

Query:  RRKN-LLRAKLA----AATWSPALQSIPEEM
        R+K+ L+RA LA     ++WSP LQSIPEE+
Subjt:  RRKN-LLRAKLA----AATWSPALQSIPEEM

A0A5A7SHL7 Uncharacterized protein2.7e-4378.12Show/hide
Query:  MLEGKQMASPNGAFRRLFRPRCRKNARANSLLEAIAKAS---TGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGG---GGGGGDVASPPVSVEQRLAFV
        M+EGKQ+ SPNG FRRLFR RCRK+A+AN LLEAIAKAS   TG VS SEE+G+VRIKMVV+KTDLAQ LEAMGGG   GGGGG VA+  VS+EQRLA V
Subjt:  MLEGKQMASPNGAFRRLFRPRCRKNARANSLLEAIAKAS---TGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGG---GGGGGDVASPPVSVEQRLAFV

Query:  RRKNLLRAKLAAATWSPALQSIPEEMDS
        RRK LLRAKLAAATWSPALQSIPEE+DS
Subjt:  RRKNLLRAKLAAATWSPALQSIPEEMDS

A0A7N2N056 Uncharacterized protein6.2e-1644.72Show/hide
Query:  MASPNGAFRRLFRPRCRKNARANSLLEAIAKASTGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGGDV-----ASPPVSVEQRLAFVRRKNLLR
        M +P   FR+ FR + +KN+R++ L   +     G VS  E+DG+VR+K+VV+K DL Q LE MGGGGGG           P +S EQRL  +++K++LR
Subjt:  MASPNGAFRRLFRPRCRKNARANSLLEAIAKASTGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGGDV-----ASPPVSVEQRLAFVRRKNLLR

Query:  A----KLAAATWSPALQSIPEEM
        A    + ++++WSPALQSIPEE+
Subjt:  A----KLAAATWSPALQSIPEEM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGAAGGGAAGCAGATGGCGTCGCCGAACGGAGCTTTCCGGCGGCTTTTCCGACCTCGGTGCCGGAAAAATGCGAGAGCCAATAGTCTATTGGAAGCCATTGCTAA
GGCGAGCACTGGCTCTGTTTCTCAGAGCGAAGAAGACGGAATCGTCCGGATAAAGATGGTGGTGAGGAAGACAGATTTAGCTCAATTTCTGGAAGCCATGGGCGGCGGCG
GCGGTGGAGGCGGAGATGTTGCTTCTCCGCCGGTCTCCGTCGAGCAGCGGTTGGCTTTCGTGAGGCGGAAGAATCTTCTCCGAGCGAAATTAGCGGCGGCGACTTGGAGT
CCGGCGCTACAGAGCATTCCAGAAGAGATGGATTCAATT
mRNA sequenceShow/hide mRNA sequence
ATGCTCGAAGGGAAGCAGATGGCGTCGCCGAACGGAGCTTTCCGGCGGCTTTTCCGACCTCGGTGCCGGAAAAATGCGAGAGCCAATAGTCTATTGGAAGCCATTGCTAA
GGCGAGCACTGGCTCTGTTTCTCAGAGCGAAGAAGACGGAATCGTCCGGATAAAGATGGTGGTGAGGAAGACAGATTTAGCTCAATTTCTGGAAGCCATGGGCGGCGGCG
GCGGTGGAGGCGGAGATGTTGCTTCTCCGCCGGTCTCCGTCGAGCAGCGGTTGGCTTTCGTGAGGCGGAAGAATCTTCTCCGAGCGAAATTAGCGGCGGCGACTTGGAGT
CCGGCGCTACAGAGCATTCCAGAAGAGATGGATTCAATT
Protein sequenceShow/hide protein sequence
MLEGKQMASPNGAFRRLFRPRCRKNARANSLLEAIAKASTGSVSQSEEDGIVRIKMVVRKTDLAQFLEAMGGGGGGGGDVASPPVSVEQRLAFVRRKNLLRAKLAAATWS
PALQSIPEEMDSI