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MS022227 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022227
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein DETOXIFICATION
Genome locationscaffold47:1850392..1850532
RNA-Seq ExpressionMS022227
SyntenyMS022227
Gene Ontology termsGO:0042908 - xenobiotic transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015297 - antiporter activity (molecular function)
GO:0042910 - xenobiotic transmembrane transporter activity (molecular function)
InterPro domainsIPR044644 - Multi antimicrobial extrusion protein DinF-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK23294.1 protein DETOXIFICATION 45 [Cucumis melo var. makuwa]7.8e-0670.21Show/hide
Query:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
        ++ +LTTMT+ TSM A Q  VAM AHQICMQVWLAVS+L DALA SS
Subjt:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
XP_008447864.1 PREDICTED: protein DETOXIFICATION 45, chloroplastic [Cucumis melo]7.8e-0670.21Show/hide
Query:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
        ++ +LTTMT+ TSM A Q  VAM AHQICMQVWLAVS+L DALA SS
Subjt:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
XP_011046285.1 PREDICTED: MATE efflux family protein 3, chloroplastic-like [Populus euphratica]2.1e-0671.74Show/hide
Query:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATS
        ++ +LTTMT+ TSM AHQ  VAM AHQICMQVWLAVS+L DALA+S
Subjt:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATS
XP_022136013.1 protein DETOXIFICATION 45, chloroplastic isoform X1 [Momordica charantia]7.8e-0670.21Show/hide
Query:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
        ++ +LTTMT+ TSM A Q  VAM AHQICMQVWLAVS+L DALA SS
Subjt:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
XP_038886867.1 protein DETOXIFICATION 45, chloroplastic [Benincasa hispida]7.8e-0670.21Show/hide
Query:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
        ++ +LTTMT+ TSM A Q  VAM AHQICMQVWLAVS+L DALA SS
Subjt:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
TrEMBL top hitse value%identityAlignment
A0A0A0K1I8 Protein DETOXIFICATION3.8e-0670.21Show/hide
Query:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
        ++ +LTTMT+ TSM A Q  VAM AHQICMQVWLAVS+L DALA SS
Subjt:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
A0A1S3BIE1 Protein DETOXIFICATION3.8e-0670.21Show/hide
Query:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
        ++ +LTTMT+ TSM A Q  VAM AHQICMQVWLAVS+L DALA SS
Subjt:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
A0A5D3DI35 Protein DETOXIFICATION3.8e-0670.21Show/hide
Query:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
        ++ +LTTMT+ TSM A Q  VAM AHQICMQVWLAVS+L DALA SS
Subjt:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
A0A6J1C2B9 Protein DETOXIFICATION3.8e-0670.21Show/hide
Query:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
        ++ +LTTMT+ TSM A Q  VAM AHQICMQVWLAVS+L DALA SS
Subjt:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
A0A6J1C6G1 Protein DETOXIFICATION3.8e-0670.21Show/hide
Query:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
        ++ +LTTMT+ TSM A Q  VAM AHQICMQVWLAVS+L DALA SS
Subjt:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS
SwissProt top hitse value%identityAlignment
Q9SVE7 Protein DETOXIFICATION 45, chloroplastic5.1e-0869.57Show/hide
Query:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATS
        ++ +L TMTV TSM A Q V AM AHQICMQVWLAVS+L DALA+S
Subjt:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATS
Arabidopsis top hitse value%identityAlignment
AT4G38380.1 MATE efflux family protein3.6e-0969.57Show/hide
Query:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATS
        ++ +L TMTV TSM A Q V AM AHQICMQVWLAVS+L DALA+S
Subjt:  SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCATCTATCTTCTAACTACGATGACGGTCGAGACGTCGATGGTTGCTCATCAAAGTGTCGTGGCTATGGTTGCACACCAAATATGTATGCAAGTATGGTTAGCAGTATC
TATTCTTATTGATGCTCTTGCTACTTCTAGT
mRNA sequenceShow/hide mRNA sequence
TCCATCTATCTTCTAACTACGATGACGGTCGAGACGTCGATGGTTGCTCATCAAAGTGTCGTGGCTATGGTTGCACACCAAATATGTATGCAAGTATGGTTAGCAGTATC
TATTCTTATTGATGCTCTTGCTACTTCTAGT
Protein sequenceShow/hide protein sequence
SIYLLTTMTVETSMVAHQSVVAMVAHQICMQVWLAVSILIDALATSS