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MS022241 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022241
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold47:1956663..1956889
RNA-Seq ExpressionMS022241
SyntenyMS022241
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2957479.1 Hypothetical predicted protein [Olea europaea subsp. europaea]5.1e-1577.61Show/hide
Query:  MSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKE-------QPNRLRSQGAIPTAAK
        MSKPPAEQITEVG ESAGD EKAAEQSVEG QPTECV +  GKE       QPNR RSQGAIPTAAK
Subjt:  MSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKE-------QPNRLRSQGAIPTAAK

CAN64513.1 hypothetical protein VITISV_004352 [Vitis vinifera]2.7e-2480.25Show/hide
Query:  MVPPYAIGAETPIMSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKE-------QPNRLRSQGAIPTAAKG
        ++PPYAIGAE PIMSKPPAEQITEVGSESAGD EKAAE SVEGTQPTECVP+  GKE       QPNRLRS+GAIPTAAKG
Subjt:  MVPPYAIGAETPIMSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKE-------QPNRLRSQGAIPTAAKG

KAA0042452.1 hypothetical protein E6C27_scaffold46442G00020 [Cucumis melo var. makuwa]1.4e-1773.68Show/hide
Query:  MVPPYAIGAETPIMSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKEQPNRLRSQ-GAIPTAAKGS
        MVPPYAIGA  PIMSKPPAEQITEVGSESAGD EKAAEQSVEG QPTEC+PK  GKE     +SQ    PT   GS
Subjt:  MVPPYAIGAETPIMSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKEQPNRLRSQ-GAIPTAAKGS

KAB1227959.1 hypothetical protein CJ030_MR1G013839 [Morella rubra]2.0e-1977.92Show/hide
Query:  AIGAETPIMSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKE-------QPNRLRSQGAIPTAAKGS
        A+ AE PIMSKPPAEQITEVG ESAGD EKAAEQSVEGTQPTECV +  GKE       QPNR RSQGAIPTAAKGS
Subjt:  AIGAETPIMSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKE-------QPNRLRSQGAIPTAAKGS

KAB1227962.1 hypothetical protein CJ030_MR1G013842 [Morella rubra]9.2e-1779.71Show/hide
Query:  MSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKE-------QPNRLRSQGAIPTAAKGS
        MSKPPAEQITEVG ESAGD EKAAEQSVEGTQPTECV +  GKE       QPNR RSQGAIPTAAKGS
Subjt:  MSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKE-------QPNRLRSQGAIPTAAKGS

TrEMBL top hitse value%identityAlignment
A0A5A7TGB2 Uncharacterized protein6.9e-1873.68Show/hide
Query:  MVPPYAIGAETPIMSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKEQPNRLRSQ-GAIPTAAKGS
        MVPPYAIGA  PIMSKPPAEQITEVGSESAGD EKAAEQSVEG QPTEC+PK  GKE     +SQ    PT   GS
Subjt:  MVPPYAIGAETPIMSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKEQPNRLRSQ-GAIPTAAKGS

A0A6A1WRP5 PMD domain-containing protein9.6e-2077.92Show/hide
Query:  AIGAETPIMSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKE-------QPNRLRSQGAIPTAAKGS
        A+ AE PIMSKPPAEQITEVG ESAGD EKAAEQSVEGTQPTECV +  GKE       QPNR RSQGAIPTAAKGS
Subjt:  AIGAETPIMSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKE-------QPNRLRSQGAIPTAAKGS

A0A6A1WRS3 Uncharacterized protein4.5e-1779.71Show/hide
Query:  MSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKE-------QPNRLRSQGAIPTAAKGS
        MSKPPAEQITEVG ESAGD EKAAEQSVEGTQPTECV +  GKE       QPNR RSQGAIPTAAKGS
Subjt:  MSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKE-------QPNRLRSQGAIPTAAKGS

A5AFS6 Uncharacterized protein1.3e-2480.25Show/hide
Query:  MVPPYAIGAETPIMSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKE-------QPNRLRSQGAIPTAAKG
        ++PPYAIGAE PIMSKPPAEQITEVGSESAGD EKAAE SVEGTQPTECVP+  GKE       QPNRLRS+GAIPTAAKG
Subjt:  MVPPYAIGAETPIMSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKE-------QPNRLRSQGAIPTAAKG

F6H890 Uncharacterized protein4.0e-1879.71Show/hide
Query:  MSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKE-------QPNRLRSQGAIPTAAKGS
        MSKPPAEQITEVGSESAGD EKAAE SVEGTQPTECVP+  GKE       QPNRLRS+GAIP AAKGS
Subjt:  MSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKE-------QPNRLRSQGAIPTAAKGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCCCCCTTATGCAATAGGGGCCGAGACACCGATCATGTCAAAGCCTCCTGCCGAGCAAATTACTGAAGTTGGTTCTGAGTCGGCTGGCGATTCAGAAAAGGCTGC
TGAACAGAGTGTCGAAGGAACACAACCTACCGAATGTGTTCCAAAGTTCGTAGGTAAAGAACAGCCGAACCGACTGAGATCACAGGGAGCGATCCCCACAGCCGCTAAAG
GTAGC
mRNA sequenceShow/hide mRNA sequence
ATGGTCCCCCCTTATGCAATAGGGGCCGAGACACCGATCATGTCAAAGCCTCCTGCCGAGCAAATTACTGAAGTTGGTTCTGAGTCGGCTGGCGATTCAGAAAAGGCTGC
TGAACAGAGTGTCGAAGGAACACAACCTACCGAATGTGTTCCAAAGTTCGTAGGTAAAGAACAGCCGAACCGACTGAGATCACAGGGAGCGATCCCCACAGCCGCTAAAG
GTAGC
Protein sequenceShow/hide protein sequence
MVPPYAIGAETPIMSKPPAEQITEVGSESAGDSEKAAEQSVEGTQPTECVPKFVGKEQPNRLRSQGAIPTAAKGS