; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022250 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022250
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold47:2019561..2020034
RNA-Seq ExpressionMS022250
SyntenyMS022250
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059605.1 hypothetical protein E6C27_scaffold54G00270 [Cucumis melo var. makuwa]3.1e-6278.53Show/hide
Query:  MTSVPRRSFLPTRPLNDALPVSHPD--SDQTLRRRLSSISFKIQPISSPVTSW-PFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEIN--
        MTS+P R FLPT PLNDALP+S PD  S QTLRRRLSSISFKI PISSP+TSW  FRRSKSVSSMR+++ +SLRKWWDWGWSWILSRK+ FA+DLE+N  
Subjt:  MTSVPRRSFLPTRPLNDALPVSHPD--SDQTLRRRLSSISFKIQPISSPVTSW-PFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEIN--

Query:  --DDETKSLGSN--CRGS--WRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVK
          D+ETK+LGSN  CRGS  ++HLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFDDGVK
Subjt:  --DDETKSLGSN--CRGS--WRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVK

KAG7022775.1 hypothetical protein SDJN02_16511, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-7388.24Show/hide
Query:  MTSVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK
        MTS+PRRSFLPTRPLNDALPVS PDS QTLRRRLSSISFKIQPISSPVTSW F RSKSVSS+R+++G SLRKWWDWGWSWILSRKA FA+DLE+ND+ETK
Subjt:  MTSVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK

Query:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVKT
        SL SNCRGS+RHLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFDDGVK+
Subjt:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVKT

XP_022135907.1 uncharacterized protein LOC111007745 [Momordica charantia]5.4e-8399.35Show/hide
Query:  MTSVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK
        MT VPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK
Subjt:  MTSVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK

Query:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVKT
        SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVKT
Subjt:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVKT

XP_022928235.1 uncharacterized protein LOC111435129 [Cucurbita moschata]5.0e-7387.58Show/hide
Query:  MTSVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK
        MTS+PRRSFLPTRPLNDALPVS PDS QTLRRRLSSISFKIQPISSPVTSW F RSKSVSS+R+++G SLRKWWDWGWSWILSRKA FA+DLE+ND+ETK
Subjt:  MTSVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK

Query:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVKT
        SL SNCRGS+RHLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFDDG++T
Subjt:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVKT

XP_038888269.1 uncharacterized protein LOC120078122 [Benincasa hispida]7.8e-7487.58Show/hide
Query:  MTSVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK
        M S+PRRSFLPTRPLNDALPVS PDS QT+RRRLSSISFKIQPISSPV SWPFRRSKSVSSMR+++GSSLRKWWDWGWSWILSRKA F +DLE+ND+ETK
Subjt:  MTSVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK

Query:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVKT
        +LGSNCRGS+RHLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFDDGV++
Subjt:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVKT

TrEMBL top hitse value%identityAlignment
A0A0A0K1L8 Uncharacterized protein9.0e-6075.46Show/hide
Query:  MTSVPRRSFLPTRPLNDALPVSHPD--SDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDE
        MTS+P R FLPT PLNDALP+S P   S QTLRRRLSSISFKI PISSP+TSW F RSKS+SSMR+++ +SLRKWWDWGWSWILSRKA FA+DLE+ND++
Subjt:  MTSVPRRSFLPTRPLNDALPVSHPD--SDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDE

Query:  -----TKSLGS--NCRGS--WRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVK
             TK+LGS  + RGS  ++HLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFDDGVK
Subjt:  -----TKSLGS--NCRGS--WRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVK

A0A2I4FBL9 uncharacterized protein LOC1089972846.0e-5672.6Show/hide
Query:  RSFLPTRPLNDALPVSHPDS-DQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETKSLGSN
        RSF+P  P   ALPVS  DS +Q LRRRLSS+S KIQPI+SP TSW FRRSKSVSSM EY+GSS+R+WWDWGWSWILSRK  FAKDLE+N++E K LGS+
Subjt:  RSFLPTRPLNDALPVSHPDS-DQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETKSLGSN

Query:  CRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGV
         +GSWRH+FYKVRSE RKL+ SD VGLPQT++YDS NYS+NFDDG+
Subjt:  CRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGV

A0A5A7V189 Uncharacterized protein1.5e-6278.53Show/hide
Query:  MTSVPRRSFLPTRPLNDALPVSHPD--SDQTLRRRLSSISFKIQPISSPVTSW-PFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEIN--
        MTS+P R FLPT PLNDALP+S PD  S QTLRRRLSSISFKI PISSP+TSW  FRRSKSVSSMR+++ +SLRKWWDWGWSWILSRK+ FA+DLE+N  
Subjt:  MTSVPRRSFLPTRPLNDALPVSHPD--SDQTLRRRLSSISFKIQPISSPVTSW-PFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEIN--

Query:  --DDETKSLGSN--CRGS--WRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVK
          D+ETK+LGSN  CRGS  ++HLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFDDGVK
Subjt:  --DDETKSLGSN--CRGS--WRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVK

A0A6J1C433 uncharacterized protein LOC1110077452.6e-8399.35Show/hide
Query:  MTSVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK
        MT VPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK
Subjt:  MTSVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK

Query:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVKT
        SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVKT
Subjt:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVKT

A0A6J1ER56 uncharacterized protein LOC1114351292.4e-7387.58Show/hide
Query:  MTSVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK
        MTS+PRRSFLPTRPLNDALPVS PDS QTLRRRLSSISFKIQPISSPVTSW F RSKSVSS+R+++G SLRKWWDWGWSWILSRKA FA+DLE+ND+ETK
Subjt:  MTSVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETK

Query:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVKT
        SL SNCRGS+RHLFYKVRSEFRKL+RSDRVGLPQTFKYDSVNYSKNFDDG++T
Subjt:  SLGSNCRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVKT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G17300.1 unknown protein2.7e-2448Show/hide
Query:  ALPVSHPDSDQ--TLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAP-FAKDLEINDDETK-SLGSNCRGSWRHL
        +LP+S   +D+   LRRRLSS+S  +        S    RSKSVS M E  GSS+++WW+W WSWIL +K P F  DLE+N +ETK SLG+  RGS+ H+
Subjt:  ALPVSHPDSDQ--TLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAP-FAKDLEINDDETK-SLGSNCRGSWRHL

Query:  FYKVRSEFRKLMRSDRVGLPQTFKY
        F+K+RSE R+L+R     LP + K+
Subjt:  FYKVRSEFRKLMRSDRVGLPQTFKY

AT4G35320.1 unknown protein4.9e-2650.43Show/hide
Query:  DSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETKSLGSNCRGSWRHLFYKVRSEFRKL
        D    +RRRLSS+S  +    + + +  F RSKSVS+M E +GSS+++WW+WGWSWILSRK  F +DLE+N DE KS+GS  RGS  H+F+K+RS+ R  
Subjt:  DSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETKSLGSNCRGSWRHLFYKVRSEFRKL

Query:  M-RSDRVGLPQTFKY
        M  S    LP + KY
Subjt:  M-RSDRVGLPQTFKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCACCGCCATCACCATGACTTCCGTTCCGCGGCGGAGCTTTCTCCCGACGCGGCCTCTCAACGACGCGCTCCCCGTCTCGCATCCAGATTCCGATCAAACGCTACGCAG
AAGGCTCTCTTCGATTTCCTTCAAGATCCAGCCGATTTCTTCGCCTGTCACTTCCTGGCCGTTTCGTAGATCCAAATCGGTGTCCTCCATGCGCGAATACTCCGGCAGTT
CGCTGAGGAAGTGGTGGGATTGGGGATGGTCCTGGATCCTCTCTCGCAAGGCTCCCTTCGCCAAAGATCTGGAGATTAACGACGATGAAACCAAATCTCTTGGATCTAAT
TGCAGAGGTAGTTGGCGGCATCTTTTCTATAAGGTTAGGTCTGAGTTCCGGAAGCTTATGCGATCCGATCGCGTCGGTCTTCCTCAAACTTTCAAGTACGATTCCGTCAA
TTACTCGAAGAATTTCGACGACGGAGTGAAAACC
mRNA sequenceShow/hide mRNA sequence
GCCACCGCCATCACCATGACTTCCGTTCCGCGGCGGAGCTTTCTCCCGACGCGGCCTCTCAACGACGCGCTCCCCGTCTCGCATCCAGATTCCGATCAAACGCTACGCAG
AAGGCTCTCTTCGATTTCCTTCAAGATCCAGCCGATTTCTTCGCCTGTCACTTCCTGGCCGTTTCGTAGATCCAAATCGGTGTCCTCCATGCGCGAATACTCCGGCAGTT
CGCTGAGGAAGTGGTGGGATTGGGGATGGTCCTGGATCCTCTCTCGCAAGGCTCCCTTCGCCAAAGATCTGGAGATTAACGACGATGAAACCAAATCTCTTGGATCTAAT
TGCAGAGGTAGTTGGCGGCATCTTTTCTATAAGGTTAGGTCTGAGTTCCGGAAGCTTATGCGATCCGATCGCGTCGGTCTTCCTCAAACTTTCAAGTACGATTCCGTCAA
TTACTCGAAGAATTTCGACGACGGAGTGAAAACC
Protein sequenceShow/hide protein sequence
ATAITMTSVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVSSMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETKSLGSN
CRGSWRHLFYKVRSEFRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVKT