; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022251 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022251
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCMP-sialic acid transporter 4
Genome locationscaffold47:2019564..2019836
RNA-Seq ExpressionMS022251
SyntenyMS022251
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER57765.1 calnexin 1 [Striga asiatica]6.2e-0741.77Show/hide
Query:  IVLESLRKTDAIGSHKLP-ELRPNLIEKMPPTTSAIRSKRFGFIVVNLQIFGEGSLAREDPGPSPIPPLPQRTAGVFAH
        IV E LR++D IG+ + P EL   L+E + P    + +   G ++V+LQI  EG L  E+P P+P+PP P R AG   H
Subjt:  IVLESLRKTDAIGSHKLP-ELRPNLIEKMPPTTSAIRSKRFGFIVVNLQIFGEGSLAREDPGPSPIPPLPQRTAGVFAH

KAB1207640.1 CMP-sialic acid transporter 4 [Morella rubra]2.6e-1348.24Show/hide
Query:  HSVVEILRVIDGIVLESLRKTDAIGSHKLPELRPNLIEKMPPTTSAIRSKRFGFIVVNLQIFGEGSLAREDPGPSPIPPLPQRTA
        +SV +IL V+ GIV   LRK+  +G+HKL +L P+L+E + P T  +R+K   F +V+ QI GE  L RE+P P+P+PPLP  TA
Subjt:  HSVVEILRVIDGIVLESLRKTDAIGSHKLPELRPNLIEKMPPTTSAIRSKRFGFIVVNLQIFGEGSLAREDPGPSPIPPLPQRTA

KAE9448698.1 hypothetical protein C3L33_19437, partial [Rhododendron williamsianum]2.6e-0545.61Show/hide
Query:  IGSHKLPELRPNLIEKMPPTTSAIRSKRFGFIVVNLQIFGEGSLAREDPGPSPIPPL
        I + KLPELR +LIE +PP    ++ ++   ++V+LQ+ GE  L R+DP  SP+PPL
Subjt:  IGSHKLPELRPNLIEKMPPTTSAIRSKRFGFIVVNLQIFGEGSLAREDPGPSPIPPL

KAG6604978.1 hypothetical protein SDJN03_02295, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1045.57Show/hide
Query:  SVVEILRVIDGIVLESLRKTDAIGSHKLPELRPNLIEKMPPTTSAIRSKRFGFIVVNLQIFGEGSLAREDPGPSPIPPL
        ++VE++   +G+VL  LRK + IG+++ P+    L E + P +S +RSK FGF+ V+LQI  E   ARE+P P+PIPPL
Subjt:  SVVEILRVIDGIVLESLRKTDAIGSHKLPELRPNLIEKMPPTTSAIRSKRFGFIVVNLQIFGEGSLAREDPGPSPIPPL

PAN36231.1 hypothetical protein PAHAL_6G261700 [Panicum hallii]1.2e-0539.08Show/hide
Query:  SVVEILRVIDGIVLESLRK----TDAIGSHKLPELRPNLIEKMPPTTSAIR-SKRFGFIVVNLQIFGEGSLAREDPGPSPIPPLPQR
        +VVE+LRV DG+V ESLR+      A+ + + P    +L+E +PP  +A+  ++R G +V +LQ   E    R  P   P+PP PQR
Subjt:  SVVEILRVIDGIVLESLRK----TDAIGSHKLPELRPNLIEKMPPTTSAIR-SKRFGFIVVNLQIFGEGSLAREDPGPSPIPPLPQR

TrEMBL top hitse value%identityAlignment
A0A0A0K4Y8 Uncharacterized protein4.0e-2060Show/hide
Query:  FHSVVEILRVIDGIVLESLRKTDAIGSHKLPELRPNLIEKM---PPTTSAI-RSKRFG-----FIVVNLQIFGEGSLAREDPGPSPIPPLPQRTAGVFAH
        FHSV+EILRVI+ IV +SLRKTDAI S++  ELRPN IEKM     T+  I RSK F       +VV+LQI  EGS  REDPGPSPIPPL +R+ G  AH
Subjt:  FHSVVEILRVIDGIVLESLRKTDAIGSHKLPELRPNLIEKM---PPTTSAI-RSKRFG-----FIVVNLQIFGEGSLAREDPGPSPIPPLPQRTAGVFAH

A0A2S3I418 Uncharacterized protein5.6e-0639.08Show/hide
Query:  SVVEILRVIDGIVLESLRK----TDAIGSHKLPELRPNLIEKMPPTTSAIR-SKRFGFIVVNLQIFGEGSLAREDPGPSPIPPLPQR
        +VVE+LRV DG+V ESLR+      A+ + + P    +L+E +PP  +A+  ++R G +V +LQ   E    R  P   P+PP PQR
Subjt:  SVVEILRVIDGIVLESLRK----TDAIGSHKLPELRPNLIEKMPPTTSAIR-SKRFGFIVVNLQIFGEGSLAREDPGPSPIPPLPQR

A0A5A7RKK5 Calnexin 13.0e-0741.77Show/hide
Query:  IVLESLRKTDAIGSHKLP-ELRPNLIEKMPPTTSAIRSKRFGFIVVNLQIFGEGSLAREDPGPSPIPPLPQRTAGVFAH
        IV E LR++D IG+ + P EL   L+E + P    + +   G ++V+LQI  EG L  E+P P+P+PP P R AG   H
Subjt:  IVLESLRKTDAIGSHKLP-ELRPNLIEKMPPTTSAIRSKRFGFIVVNLQIFGEGSLAREDPGPSPIPPLPQRTAGVFAH

A0A6A1V8Y8 CMP-sialic acid transporter 41.3e-1348.24Show/hide
Query:  HSVVEILRVIDGIVLESLRKTDAIGSHKLPELRPNLIEKMPPTTSAIRSKRFGFIVVNLQIFGEGSLAREDPGPSPIPPLPQRTA
        +SV +IL V+ GIV   LRK+  +G+HKL +L P+L+E + P T  +R+K   F +V+ QI GE  L RE+P P+P+PPLP  TA
Subjt:  HSVVEILRVIDGIVLESLRKTDAIGSHKLPELRPNLIEKMPPTTSAIRSKRFGFIVVNLQIFGEGSLAREDPGPSPIPPLPQRTA

A0A6V7QR40 Uncharacterized protein1.7e-1045.12Show/hide
Query:  VVEILRVIDGIVLESLRKTDAIGSHKLPELRPNLIEKMPPTTSAIRSKRFGFIVVNLQIFGEGSLAREDPGPSPIPPLPQRT
        +VEIL V+DGIV E LR    IGS +LP L    +E +   T A+ ++    ++V+L++ GEG L REDP P+ IPP P R+
Subjt:  VVEILRVIDGIVLESLRKTDAIGSHKLPELRPNLIEKMPPTTSAIRSKRFGFIVVNLQIFGEGSLAREDPGPSPIPPLPQRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTCACTCCGTCGTCGAAATTCTTCGAGTAATTGACGGAATCGTACTTGAAAGTTTGAGGAAGACCGACGCGATCGGATCGCATAAGCTTCCGGAACTCAGACCTAACCT
TATAGAAAAGATGCCGCCAACTACCTCTGCAATTAGATCCAAGAGATTTGGTTTCATCGTCGTTAATCTCCAGATCTTTGGCGAAGGGAGCCTTGCGAGAGAGGATCCAG
GACCATCCCCAATCCCACCACTTCCTCAGCGAACTGCCGGAGTATTCGCGCAT
mRNA sequenceShow/hide mRNA sequence
TTTCACTCCGTCGTCGAAATTCTTCGAGTAATTGACGGAATCGTACTTGAAAGTTTGAGGAAGACCGACGCGATCGGATCGCATAAGCTTCCGGAACTCAGACCTAACCT
TATAGAAAAGATGCCGCCAACTACCTCTGCAATTAGATCCAAGAGATTTGGTTTCATCGTCGTTAATCTCCAGATCTTTGGCGAAGGGAGCCTTGCGAGAGAGGATCCAG
GACCATCCCCAATCCCACCACTTCCTCAGCGAACTGCCGGAGTATTCGCGCAT
Protein sequenceShow/hide protein sequence
FHSVVEILRVIDGIVLESLRKTDAIGSHKLPELRPNLIEKMPPTTSAIRSKRFGFIVVNLQIFGEGSLAREDPGPSPIPPLPQRTAGVFAH