; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022268 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022268
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold47:2137374..2138453
RNA-Seq ExpressionMS022268
SyntenyMS022268
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011839.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-15679.72Show/hide
Query:  QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNR
        Q+QLQSRLR+SKI+SS+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW  S SEPRSSPP RRSPPD RE RRVP+F+  VSA YP D+RN+
Subjt:  QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNR

Query:  RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL
        R N+ SEGSS RF NEG +SR R+E LSQKDFSFLEKFKLNTDNQS+S EK E SS+ +FSES+Q KQSQPQ PPEADEIF+KMKETGLIPNAVAMLDGL
Subjt:  RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG
        CKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEK DEAIRIFRKMQ NGISPNAFS+G+LIQGLYK  +LE+A+ FC EMLESGHSPN+TTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG

Query:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF
        L+DELCKE+G +EA +VIETLKQKGFL+NEK LREFLNKRAPFSP+IWE IFGKKTKEFF
Subjt:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF

XP_022136091.1 pentatricopeptide repeat-containing protein At4g38150 [Momordica charantia]2.8e-19698.89Show/hide
Query:  QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNR
        QLQLQSRLR+SKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRS+PPHRRSPPDSREPRRVP+FSDGVSASYPGDDRNR
Subjt:  QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNR

Query:  RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL
        RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL
Subjt:  RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG
        CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTT VG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG

Query:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF
        LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF
Subjt:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF

XP_022952706.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata]1.9e-15579.44Show/hide
Query:  QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNR
        Q+QLQSRLR+SKI+SS+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW  S SEPRSSPP RRSPPD RE RRVP+F+  VSA YP D+RN+
Subjt:  QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNR

Query:  RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL
        R N+ SEGSS RF N+G +SR R+E LSQKDFSFLEKFKLNTDNQS+S EK E SS+ + SES+Q KQSQPQ PPEADEIF+KMKETGLIPNAVAMLDGL
Subjt:  RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG
        CKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEKLDEAIRIFRKMQ NGISPNAFS+G+LIQGLYK  +LE+A+ FCIEMLESGHSPN+TTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG

Query:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF
        L+DELCKE+G +EA +VIETLKQKGFL+NEK LR+FLNKRAPFSP+IWE IFGKKTKEFF
Subjt:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF

XP_022969144.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima]3.4e-15780.56Show/hide
Query:  QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNR
        Q+QLQSRLR+SKI+ S+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW  S SEPRSSPP RRSPPD RE RRVP+F+  VSA YP D+RN+
Subjt:  QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNR

Query:  RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL
        R N+  EGS  RF NEG +SR+RSE LSQKDFSFLEKFKLNTDN S+S EKTE SS+ +FSES+Q KQSQPQ PPEADEIF+KMKETGLIPNAVAMLDGL
Subjt:  RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG
        CKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAE LDEAIRIFRKMQ NGISPNAFS+GVLIQGLYKC KLE+A+ FCIEMLESGHSPN+TTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG

Query:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF
        L+DELCKE+G +EA +VIETLKQKGFL+NEKALREFLNKRAPFSP+IWE IFGKKTKEFF
Subjt:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF

XP_023554525.1 pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita pepo subsp. pepo]2.2e-15680Show/hide
Query:  QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNR
        Q+QLQSRLR+SKI+SS+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW  S SEPRSSPP RRSPPD RE RRVP+F+   SA YP D+RN+
Subjt:  QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNR

Query:  RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL
        R N+ SEGSS RF NEG +SR+R+E LSQKDFSFLEKFKLNTDNQS+S EK E SS+ +FSES+Q +QSQPQ PPEADEIF+KMKETGLIPNAVAMLDGL
Subjt:  RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG
        CKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEKLDEAIRIFRKMQ NGISPNAFS+G+LIQGLYK  +LE+A+ FCIEMLESGHSPN+TTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG

Query:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF
        L+DELCKE+G +EA +VIETLKQKGFL+NEKALREFLNKRAPFSP+IWE IFGKKTKEFF
Subjt:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF

TrEMBL top hitse value%identityAlignment
A0A0A0K6C0 Uncharacterized protein3.1e-14075Show/hide
Query:  QLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNRRI
        QLQSRL++SKI+SS+I K E   PLLH+ LRT DFSL P QSR F+SNSMDDD A S+SEP ++PP RR PPD RE RRVPR   GV+ASY  D+RN+R 
Subjt:  QLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNRRI

Query:  NKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQ--SSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL
        N+ SEGSS RF NEG  S QRSE LSQKDFSFLEKFKLNTDNQSS KEKTE+  SSAP     ++++QS+PQRPPEADEIF KMKETGLIPNAVAMLDGL
Subjt:  NKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQ--SSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG
        CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK DEAIRIFRKMQ NGI PNAFSFGVLIQGLYKC KL++A+ FC EMLESGH PN+TTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG

Query:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF
        L+D LC E+G +EA SV+ET KQKGFL++EKALRE LNKRAPFSP+IW+  FG +   FF
Subjt:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF

A0A1S3CFW0 pentatricopeptide repeat-containing protein At4g381504.5e-13975.56Show/hide
Query:  QLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNRRI
        Q QSRL++SKI+SSSI K E   PLLH+ LRT DFSL P  SR FSSNSMDDD A S SEPR++PP RR PPD RE RRVPR   GV+ SY  D+RN+R 
Subjt:  QLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNRRI

Query:  NKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQ-SSAPRFSESVQEK-QSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL
        N+ SEGSS RF NEG  SRQRSE LSQKDFSFLEKFKLNTDNQSS  EKTE+ SS+   SES+QEK QSQ QRPP ADEIF+KMKE+GLIPNAVAMLDGL
Subjt:  NKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQ-SSAPRFSESVQEK-QSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG
        CKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEK DEAIRIFRKMQ  GISPNAFSFGVLIQGLYKC KL++A+ FC EMLESGH PN+TTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG

Query:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF
        L+D LC E+G +EA +V+ET KQKGFL++EKALREFLNKRAPFSP+IW+  FG K   FF
Subjt:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF

A0A6J1C2J3 pentatricopeptide repeat-containing protein At4g381501.4e-19698.89Show/hide
Query:  QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNR
        QLQLQSRLR+SKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRS+PPHRRSPPDSREPRRVP+FSDGVSASYPGDDRNR
Subjt:  QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNR

Query:  RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL
        RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL
Subjt:  RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG
        CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTT VG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG

Query:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF
        LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF
Subjt:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF

A0A6J1GKZ0 pentatricopeptide repeat-containing protein At4g38150-like9.0e-15679.44Show/hide
Query:  QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNR
        Q+QLQSRLR+SKI+SS+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW  S SEPRSSPP RRSPPD RE RRVP+F+  VSA YP D+RN+
Subjt:  QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNR

Query:  RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL
        R N+ SEGSS RF N+G +SR R+E LSQKDFSFLEKFKLNTDNQS+S EK E SS+ + SES+Q KQSQPQ PPEADEIF+KMKETGLIPNAVAMLDGL
Subjt:  RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG
        CKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEKLDEAIRIFRKMQ NGISPNAFS+G+LIQGLYK  +LE+A+ FCIEMLESGHSPN+TTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG

Query:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF
        L+DELCKE+G +EA +VIETLKQKGFL+NEK LR+FLNKRAPFSP+IWE IFGKKTKEFF
Subjt:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF

A0A6J1I1Q2 pentatricopeptide repeat-containing protein At4g38150-like1.6e-15780.56Show/hide
Query:  QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNR
        Q+QLQSRLR+SKI+ S+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW  S SEPRSSPP RRSPPD RE RRVP+F+  VSA YP D+RN+
Subjt:  QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNR

Query:  RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL
        R N+  EGS  RF NEG +SR+RSE LSQKDFSFLEKFKLNTDN S+S EKTE SS+ +FSES+Q KQSQPQ PPEADEIF+KMKETGLIPNAVAMLDGL
Subjt:  RINKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG
        CKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAE LDEAIRIFRKMQ NGISPNAFS+GVLIQGLYKC KLE+A+ FCIEMLESGHSPN+TTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVG

Query:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF
        L+DELCKE+G +EA +VIETLKQKGFL+NEKALREFLNKRAPFSP+IWE IFGKKTKEFF
Subjt:  LVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKTKEFF

SwissProt top hitse value%identityAlignment
Q0WVK7 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial1.9e-2232.96Show/hide
Query:  EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYK
        EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++ GFC+   + EA ++F +M   G+ P++ +F  LI G  K
Subjt:  EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYK

Query:  CNKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAI
           +++A      M+++G SPNV T+  L+D LCKE   + A  ++  + + G   N       +N     S NI EA+
Subjt:  CNKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAI

Q9ASZ8 Pentatricopeptide repeat-containing protein At1g126201.3e-2133.94Show/hide
Query:  ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKC
        A E+ +KM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++IYT ++ GFC A + D+  ++ R M K  I+P+  +F  LI    K 
Subjt:  ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKC

Query:  NKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLN
         KL EA     EM++ G SP+  T+  L+D  CKE   ++A  +++ +  KG   N +     +N
Subjt:  NKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLN

Q9FIT7 Pentatricopeptide repeat-containing protein At5g61990, mitochondrial2.1e-2133.55Show/hide
Query:  ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKC
        AD+  K+M+E G++PN V    +++  CK G + EA   +  + ++G + +   YT +++G  K +K+D+A  IFR+M+  GI+P+ FS+GVLI G  K 
Subjt:  ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKC

Query:  NKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKG
          +++A     EM+E G +PNV  +  L+   C+    E+A+ +++ +  KG
Subjt:  NKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKG

Q9LPX2 Pentatricopeptide repeat-containing protein At1g12775, mitochondrial3.0e-2337.5Show/hide
Query:  ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKC
        A E+ +KM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++ Y  ++ GFC A + D+  ++ R M K  ISPN  +F VLI    K 
Subjt:  ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKC

Query:  NKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKG
         KL EA     EM++ G +PN  T+  L+D  CKE   EEA  +++ +  KG
Subjt:  NKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKG

Q9SZL5 Pentatricopeptide repeat-containing protein At4g381506.1e-7764.63Show/hide
Query:  DFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE-ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYT
        D  FLE+FKL  +  S    K EQ               +P  PPE +DEIFKKMKE GLIPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYT
Subjt:  DFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE-ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYT

Query:  AVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLN
        AVV+ FCKA K+++A RIFRKMQ NGI+PNAFS+GVL+QGLY CN L++A+ FC EMLESGHSPNV TFV LVD LC+ +G E+A+S I+TL QKGF +N
Subjt:  AVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLN

Query:  EKALREFLNKRAPFSPNIWEAIFGKKTKE
         KA++EF++KRAPF    WEAIF KK  E
Subjt:  EKALREFLNKRAPFSPNIWEAIFGKKTKE

Arabidopsis top hitse value%identityAlignment
AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.4e-2332.96Show/hide
Query:  EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYK
        EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++ GFC+   + EA ++F +M   G+ P++ +F  LI G  K
Subjt:  EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYK

Query:  CNKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAI
           +++A      M+++G SPNV T+  L+D LCKE   + A  ++  + + G   N       +N     S NI EA+
Subjt:  CNKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAI

AT1G12775.1 Pentatricopeptide repeat (PPR) superfamily protein2.1e-2437.5Show/hide
Query:  ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKC
        A E+ +KM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++ Y  ++ GFC A + D+  ++ R M K  ISPN  +F VLI    K 
Subjt:  ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKC

Query:  NKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKG
         KL EA     EM++ G +PN  T+  L+D  CKE   EEA  +++ +  KG
Subjt:  NKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKG

AT4G38150.1 Pentatricopeptide repeat (PPR) superfamily protein4.3e-7864.63Show/hide
Query:  DFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE-ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYT
        D  FLE+FKL  +  S    K EQ               +P  PPE +DEIFKKMKE GLIPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYT
Subjt:  DFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE-ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYT

Query:  AVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLN
        AVV+ FCKA K+++A RIFRKMQ NGI+PNAFS+GVL+QGLY CN L++A+ FC EMLESGHSPNV TFV LVD LC+ +G E+A+S I+TL QKGF +N
Subjt:  AVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLN

Query:  EKALREFLNKRAPFSPNIWEAIFGKKTKE
         KA++EF++KRAPF    WEAIF KK  E
Subjt:  EKALREFLNKRAPFSPNIWEAIFGKKTKE

AT4G38150.2 Pentatricopeptide repeat (PPR) superfamily protein4.3e-7864.63Show/hide
Query:  DFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE-ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYT
        D  FLE+FKL  +  S    K EQ               +P  PPE +DEIFKKMKE GLIPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYT
Subjt:  DFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE-ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYT

Query:  AVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLN
        AVV+ FCKA K+++A RIFRKMQ NGI+PNAFS+GVL+QGLY CN L++A+ FC EMLESGHSPNV TFV LVD LC+ +G E+A+S I+TL QKGF +N
Subjt:  AVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLN

Query:  EKALREFLNKRAPFSPNIWEAIFGKKTKE
         KA++EF++KRAPF    WEAIF KK  E
Subjt:  EKALREFLNKRAPFSPNIWEAIFGKKTKE

AT5G03560.2 Tetratricopeptide repeat (TPR)-like superfamily protein1.3e-2931.95Show/hide
Query:  SNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASY----PGDDRNRR---INKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKE-
        S+S   SSP    +    +E +   RFS  + A +    P + R RR    +KR+  S F +   G  +RQ S     K  +    F L+ D+     E 
Subjt:  SNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASY----PGDDRNRR---INKRSEGSSFRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKE-

Query:  -------KTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDE
               K E    P    S +    +P+ P    EIF KM+  G    AV M D L KDG   EA++LF  I++K  +P+VV +TA+V+ +  A +  E
Subjt:  -------KTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDE

Query:  AIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKL-EEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLN-KRA
         +++F +M  +G+SPNA+++ VLI+GL    K  ++A  + +EM+ +G SPN  T+  + +   +E   E AR +++ +K KGF+ +EKA+RE L  KR 
Subjt:  AIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKL-EEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLN-KRA

Query:  PFSPNIWEAIFGK
             +   +F K
Subjt:  PFSPNIWEAIFGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGTTGCAATTGCAATCTCGCCTTCGAATTTCGAAGATTGTGTCTTCATCAATTTGGAAGTGCGAAAGGCAGCTTCCTCTGCTCCACGATTCACTGCGAACGCAGGATTT
CTCGCTCTTGCCGACGCAATCTCGCTGTTTCAGCTCCAATTCCATGGACGACGATTGGGCCATCTCAAATTCCGAGCCGAGGAGCAGCCCGCCGCACCGGCGTTCTCCTC
CGGATTCCCGCGAACCTCGTCGAGTTCCTAGATTCTCCGATGGAGTATCTGCTTCTTACCCTGGGGATGATCGGAACCGACGGATTAATAAACGTTCGGAAGGTTCCTCG
TTTCGATTTGATAATGAAGGCGGCATTTCGCGGCAAAGGAGTGAGTTTCTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAGTTCAAGCTGAATACTGATAATCAGAGTAG
TAGCAAAGAGAAGACCGAGCAGAGCTCTGCTCCTCGGTTTTCTGAATCTGTCCAGGAGAAGCAGTCGCAACCGCAGCGTCCTCCTGAAGCCGATGAGATATTCAAGAAAA
TGAAGGAGACGGGTCTCATTCCTAATGCTGTCGCCATGCTTGATGGGCTGTGCAAAGATGGGCTTATCCAAGAAGCAATGAAACTCTTTGGTTTGATTCGTGAGAAGGGT
ACAATTCCAGAAGTTGTGATTTACACCGCTGTGGTTGATGGGTTTTGCAAGGCCGAGAAGCTTGATGAAGCCATCAGGATTTTCAGAAAAATGCAGAAAAATGGCATTTC
TCCTAATGCTTTCAGTTTTGGCGTCTTGATACAGGGACTGTACAAATGCAATAAATTAGAGGAAGCCATAGGATTTTGCATTGAGATGTTAGAATCTGGGCATTCTCCAA
ATGTAACCACTTTCGTTGGCCTAGTTGACGAGTTATGCAAAGAAAGGGGAACGGAAGAAGCTCGGAGTGTCATAGAAACCTTAAAACAAAAAGGGTTCTTGCTGAATGAG
AAAGCTTTAAGAGAATTTCTGAACAAAAGAGCCCCCTTTTCACCAAATATCTGGGAAGCAATCTTTGGGAAAAAAACGAAAGAATTTTTC
mRNA sequenceShow/hide mRNA sequence
CAGTTGCAATTGCAATCTCGCCTTCGAATTTCGAAGATTGTGTCTTCATCAATTTGGAAGTGCGAAAGGCAGCTTCCTCTGCTCCACGATTCACTGCGAACGCAGGATTT
CTCGCTCTTGCCGACGCAATCTCGCTGTTTCAGCTCCAATTCCATGGACGACGATTGGGCCATCTCAAATTCCGAGCCGAGGAGCAGCCCGCCGCACCGGCGTTCTCCTC
CGGATTCCCGCGAACCTCGTCGAGTTCCTAGATTCTCCGATGGAGTATCTGCTTCTTACCCTGGGGATGATCGGAACCGACGGATTAATAAACGTTCGGAAGGTTCCTCG
TTTCGATTTGATAATGAAGGCGGCATTTCGCGGCAAAGGAGTGAGTTTCTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAGTTCAAGCTGAATACTGATAATCAGAGTAG
TAGCAAAGAGAAGACCGAGCAGAGCTCTGCTCCTCGGTTTTCTGAATCTGTCCAGGAGAAGCAGTCGCAACCGCAGCGTCCTCCTGAAGCCGATGAGATATTCAAGAAAA
TGAAGGAGACGGGTCTCATTCCTAATGCTGTCGCCATGCTTGATGGGCTGTGCAAAGATGGGCTTATCCAAGAAGCAATGAAACTCTTTGGTTTGATTCGTGAGAAGGGT
ACAATTCCAGAAGTTGTGATTTACACCGCTGTGGTTGATGGGTTTTGCAAGGCCGAGAAGCTTGATGAAGCCATCAGGATTTTCAGAAAAATGCAGAAAAATGGCATTTC
TCCTAATGCTTTCAGTTTTGGCGTCTTGATACAGGGACTGTACAAATGCAATAAATTAGAGGAAGCCATAGGATTTTGCATTGAGATGTTAGAATCTGGGCATTCTCCAA
ATGTAACCACTTTCGTTGGCCTAGTTGACGAGTTATGCAAAGAAAGGGGAACGGAAGAAGCTCGGAGTGTCATAGAAACCTTAAAACAAAAAGGGTTCTTGCTGAATGAG
AAAGCTTTAAGAGAATTTCTGAACAAAAGAGCCCCCTTTTCACCAAATATCTGGGAAGCAATCTTTGGGAAAAAAACGAAAGAATTTTTC
Protein sequenceShow/hide protein sequence
QLQLQSRLRISKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDWAISNSEPRSSPPHRRSPPDSREPRRVPRFSDGVSASYPGDDRNRRINKRSEGSS
FRFDNEGGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKG
TIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVTTFVGLVDELCKERGTEEARSVIETLKQKGFLLNE
KALREFLNKRAPFSPNIWEAIFGKKTKEFF