CuGenDBv2

Gene ID	MS022278
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Period circadian protein
Genome location	scaffold47:2203290..2206379
RNA-Seq Expression	MS022278
Synteny	MS022278
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7011844.1 hypothetical protein SDJN02_26750 [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-106

81.71

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Query:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP
        MKLAPKVIFL+RDSEGF+SAI GALRPNPP +VTT DE FEFSLE+Y +KD KASG +VHYLD KG YQVSVLILQSYEPPVLACAV+ VLSHIAG  LP
Subjt:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP

Query:  SS--SMPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAG
        SS  S PTLVVPSVIT SK+KWESKT TK+D TVLLYGTE+GPETDISRTM AKVQKLP  SQIY EQLACL HLIR+ NIPAFFV G+TGRSLSNQAAG
Subjt:  SS--SMPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAG

Query:  EEIQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG
        EEIQIL+EMGEL A+ L+L FSREGIVWNPKE SKDVKEPW ALYG
Subjt:  EEIQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG

XP_004144560.1 uncharacterized protein LOC101217042 [Cucumis sativus]

7.5e-108

82.11

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Query:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP
        MKLAPKVIFL+RDSEGFASA+SGALR +PP +VTT DECFEFSLE Y IKD KASGNIVHYLD KG YQVSVLILQ+YEPPVLACA++ VLSHIAG+  P
Subjt:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP

Query:  SSS--MPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAG
        SSS   PT+VVPSVIT SK+KWESKT+TKND TVLLYGTE+GPETDISRTM AKV+KLP  SQIY+EQLACL HLI + NIPAFFV G TGRSLSNQAAG
Subjt:  SSS--MPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAG

Query:  EEIQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG
        EEIQILNEMGEL A+ L LSFSREGIVWNPKETSK+VKEPWRALYG
Subjt:  EEIQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG

XP_008462021.1 PREDICTED: uncharacterized protein LOC103500492 [Cucumis melo]

1.8e-106

81.3

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Query:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP
        MKLAPKVIFL+RDSEGFASA+SGALR NPP +VTT DE FEFSLE Y IKD KASGNIVHYLD KG YQVSVLILQ+YEPPVLACA++ VLSHIAG+  P
Subjt:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP

Query:  SSS--MPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAG
        SSS   PTLVVPS+IT SK+KWESKT+TKND TVLLYGT++GPETDIS+TM AKV+KLP  SQIY+EQLACL HLI +  IPAFFV G TGRSLSNQAAG
Subjt:  SSS--MPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAG

Query:  EEIQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG
        EEIQILNEMGEL A+ L LSFSREGIVWNPKETSKDVKEPWRALYG
Subjt:  EEIQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG

XP_022136285.1 uncharacterized protein LOC111008014 [Momordica charantia]

3.9e-133

99.18

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Query:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP
        MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQY IKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP
Subjt:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP

Query:  SSSMPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAGEE
        SSSMPTLVVPSVITYSKIKWESKTVTKND TVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAGEE
Subjt:  SSSMPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAGEE

Query:  IQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG
        IQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG
Subjt:  IQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG

XP_022952713.1 uncharacterized protein LOC111455326 [Cucurbita moschata]

6.3e-107

81.71

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Query:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP
        MKLAPKVIFL+RDSEGF+SAI GALRPNPP +VTT DE FEFSLE+Y IKDHKASG++VHYLD KG YQVSVLILQSYEPPVLACAV+ VLSHIAG   P
Subjt:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP

Query:  SS--SMPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAG
        SS  S PTLVVPSVIT SK+KWESKT TK+D TVLLYGTE+GPETDISRTM AKVQKLP  SQIY EQLACL HLIR+ NIPAFFV G+TGRSLSNQAAG
Subjt:  SS--SMPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAG

Query:  EEIQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG
        EEIQI++EMGEL A+ L+L FSREGIVWNPKE SKDVKEPW ALYG
Subjt:  EEIQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K119 Uncharacterized protein

3.6e-108

82.11

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Query:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP
        MKLAPKVIFL+RDSEGFASA+SGALR +PP +VTT DECFEFSLE Y IKD KASGNIVHYLD KG YQVSVLILQ+YEPPVLACA++ VLSHIAG+  P
Subjt:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP

Query:  SSS--MPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAG
        SSS   PT+VVPSVIT SK+KWESKT+TKND TVLLYGTE+GPETDISRTM AKV+KLP  SQIY+EQLACL HLI + NIPAFFV G TGRSLSNQAAG
Subjt:  SSS--MPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAG

Query:  EEIQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG
        EEIQILNEMGEL A+ L LSFSREGIVWNPKETSK+VKEPWRALYG
Subjt:  EEIQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG

A0A1S3CGG9 uncharacterized protein LOC103500492

8.9e-107

81.3

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Query:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP
        MKLAPKVIFL+RDSEGFASA+SGALR NPP +VTT DE FEFSLE Y IKD KASGNIVHYLD KG YQVSVLILQ+YEPPVLACA++ VLSHIAG+  P
Subjt:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP

Query:  SSS--MPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAG
        SSS   PTLVVPS+IT SK+KWESKT+TKND TVLLYGT++GPETDIS+TM AKV+KLP  SQIY+EQLACL HLI +  IPAFFV G TGRSLSNQAAG
Subjt:  SSS--MPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAG

Query:  EEIQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG
        EEIQILNEMGEL A+ L LSFSREGIVWNPKETSKDVKEPWRALYG
Subjt:  EEIQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG

A0A6J1C3H3 uncharacterized protein LOC111008014

1.9e-133

99.18

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Query:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP
        MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQY IKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP
Subjt:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP

Query:  SSSMPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAGEE
        SSSMPTLVVPSVITYSKIKWESKTVTKND TVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAGEE
Subjt:  SSSMPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAGEE

Query:  IQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG
        IQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG
Subjt:  IQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG

A0A6J1EJ28 uncharacterized protein LOC111435056 isoform X1

8.9e-107

80.33

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Query:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP
        MKLAPKVIFLI DSEGFASAISGALRPNPP +V+TRDECFEFSLE YGIKDHKASG+++HYLD KG Y VSVLILQSY+PPVLACA+NEVLSHIAG S P
Subjt:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP

Query:  SSSMPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAGEE
        SSS P LVVP VI  SK+KWE+KT+TK D +VLL+G  +GPETDISRT++AKVQKLP  SQIY EQLACL HLIR  NIPAFF+ GRTGR LSNQAAGEE
Subjt:  SSSMPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAGEE

Query:  IQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG
        IQI+ EMGEL AS L LSFSRE IVWNPKETSKDV+EPWRALYG
Subjt:  IQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG

A0A6J1GLD7 uncharacterized protein LOC111455326

3.1e-107

81.71

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Query:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP
        MKLAPKVIFL+RDSEGF+SAI GALRPNPP +VTT DE FEFSLE+Y IKDHKASG++VHYLD KG YQVSVLILQSYEPPVLACAV+ VLSHIAG   P
Subjt:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP

Query:  SS--SMPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAG
        SS  S PTLVVPSVIT SK+KWESKT TK+D TVLLYGTE+GPETDISRTM AKVQKLP  SQIY EQLACL HLIR+ NIPAFFV G+TGRSLSNQAAG
Subjt:  SS--SMPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAG

Query:  EEIQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG
        EEIQI++EMGEL A+ L+L FSREGIVWNPKE SKDVKEPW ALYG
Subjt:  EEIQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G07640.1 unknown protein

5.4e-56

41.39

Show/hide

Query:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP
        MK+A K++FL  DS+GFA+ IS  L P+P   +   +E  +  L++YG++  +  G+IVH++D    YQVS+ +L+SYEPPVL CA+NE+L  I   +  
Subjt:  MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLP

Query:  SSSMPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAGEE
        SS++PT++ P  +  SK+K+ ++++  N+    L+  ++  ET+ SR   ++++K P   QI++E L+CLLHL RV  +P   + G+   SL+++A  EE
Subjt:  SSSMPTLVVPSVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAGEE

Query:  IQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG
        +Q+++E GEL AS   LSFSR+ I W+  +TSK+ + PWRALYG
Subjt:  IQILNEMGELFASCLALSFSREGIVWNPKETSKDVKEPWRALYG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAATTAGCTCCGAAAGTAATATTCCTCATCAGAGATTCCGAGGGTTTCGCCTCAGCCATTTCCGGAGCTCTCCGCCCCAACCCTCCAATATCGGTTACCACGCGAGA
TGAATGCTTCGAGTTCTCCCTGGAGCAGTATGGAATCAAAGACCACAAAGCCTCTGGGAACATCGTTCACTATCTCGACGGCAAGGGAACCTATCAGGTTTCAGTCTTAA
TTTTACAAAGTTATGAACCTCCAGTGTTGGCATGTGCTGTGAATGAAGTTCTTTCACACATAGCAGGAGATAGTTTACCCTCTTCTTCTATGCCTACTCTTGTGGTCCCA
TCTGTTATTACGTACTCAAAGATCAAGTGGGAGAGCAAAACTGTCACCAAAAATGATCTGACTGTTCTTCTGTATGGTACCGAGATTGGTCCAGAAACGGACATTTCACG
AACGATGGTTGCCAAAGTGCAGAAACTGCCACCAATGTCGCAGATTTATCATGAACAGTTGGCCTGTTTATTACACTTGATTCGCGTCTCAAACATTCCTGCTTTTTTCG
TTTTTGGACGAACAGGTCGTAGTCTTTCCAATCAAGCTGCAGGAGAAGAGATTCAGATACTGAATGAAATGGGTGAGCTTTTTGCAAGCTGCTTGGCCCTCAGCTTTTCA
AGAGAAGGAATCGTGTGGAATCCAAAAGAAACATCAAAAGATGTTAAGGAGCCATGGCGTGCTTTATACGGC

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MKLAPKVIFLIRDSEGFASAISGALRPNPPISVTTRDECFEFSLEQYGIKDHKASGNIVHYLDGKGTYQVSVLILQSYEPPVLACAVNEVLSHIAGDSLPSSSMPTLVVP
SVITYSKIKWESKTVTKNDLTVLLYGTEIGPETDISRTMVAKVQKLPPMSQIYHEQLACLLHLIRVSNIPAFFVFGRTGRSLSNQAAGEEIQILNEMGELFASCLALSFS
REGIVWNPKETSKDVKEPWRALYG

MS022278 (gene) of Bitter gourd (TR) v1 genome