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MS022301 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022301
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP-dependent RNA helicase MAK5
Genome locationscaffold47:2360042..2360482
RNA-Seq ExpressionMS022301
SyntenyMS022301
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572225.1 hypothetical protein SDJN03_28953, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3767.05Show/hide
Query:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQ-GGGGK----------------VESKVEDGEERENG
        MK++ISAS+LSAMV YSSLLPFLHSLNLYISATIHKNY+FLLCNGLLVFIVRNSGLI  SG EQ GG G                 +E KVEDGEERENG
Subjt:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQ-GGGGK----------------VESKVEDGEERENG

Query:  LVA--EQEESEKLITEDE---EHEEEEEEEEEEEED--------GGLSNEELNQKCEEFIRKMKAEIKFELQQVLV
         +A  EQEESE+L+TE+E   EHEE+EE+EEEEEE+        G LSNEEL++K EEFIRKMKA IK E QQVL+
Subjt:  LVA--EQEESEKLITEDE---EHEEEEEEEEEEEED--------GGLSNEELNQKCEEFIRKMKAEIKFELQQVLV

KAG7011863.1 hypothetical protein SDJN02_26769, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-3869.01Show/hide
Query:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQ-GGGGK----------------VESKVEDGEERENG
        MK++ISAS+LSAMV YSSLLPFLHSLNLYISATIHKNY+FLLCNGLLVFIVRNSGLI  SG EQ GG G                 +E KVEDGEERENG
Subjt:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQ-GGGGK----------------VESKVEDGEERENG

Query:  LVA--EQEESEKLITEDE---EHEEEEEEEEEEEED---GGLSNEELNQKCEEFIRKMKAEIKFELQQVLV
         +A  EQEESE+L+TE+E   EHEE+EE+EEEEEE    G LSNEEL++K EEFIRKMKA IK E QQVL+
Subjt:  LVA--EQEESEKLITEDE---EHEEEEEEEEEEEED---GGLSNEELNQKCEEFIRKMKAEIKFELQQVLV

XP_022136122.1 ATP-dependent RNA helicase MAK5 [Momordica charantia]7.8e-6097.96Show/hide
Query:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQGGGGKVESKVEDGEERENGLVAEQEESEKLITEDEE
        MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQGGGGKVESKVEDGEERENGLVAEQEESEKLITEDEE
Subjt:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQGGGGKVESKVEDGEERENGLVAEQEESEKLITEDEE

Query:  HEEEEEEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLVY
        H   EEEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLVY
Subjt:  HEEEEEEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLVY

XP_022969273.1 sodium/potassium/calcium exchanger 1-like [Cucurbita maxima]4.1e-3767.86Show/hide
Query:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQ-GGGGK----------------VESKVEDGEERENG
        MK++ISAS+LSAMV YSSLLPFLHSLNLYISATIHKNY+FLLCNGLLVFIVRNSGLI  SG EQ GG G                 +E KVEDGEERENG
Subjt:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQ-GGGGK----------------VESKVEDGEERENG

Query:  LVAEQE-ESEKLITEDEEHEEEEEEEEEE----EEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV
         +AE+E ESE+L+TE+E+ +E EEE+EEE    EE G LSNEEL++K EEFIRKMKA IK E QQVL+
Subjt:  LVAEQE-ESEKLITEDEEHEEEEEEEEEE----EEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV

XP_038888415.1 histone H3.v1-like [Benincasa hispida]7.1e-3769.33Show/hide
Query:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQG------------GGGKVESKVEDGEERENGLVAEQ
        MK++ISASLLSAMV YSSLLPFLHSLNLYIS TIHKNY+FLLCNGLLVFIVRNSGLIG S +EQ             G  K+ESKVE  EERENGL+A++
Subjt:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQG------------GGGKVESKVEDGEERENGLVAEQ

Query:  EESEKLITEDEEHEE-----EEEEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV
        EE+E+LIT+DE+ EE     EEEEEEEEEE     +EELN+KCEEFIRKMK  IKFE QQV V
Subjt:  EESEKLITEDEEHEE-----EEEEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV

TrEMBL top hitse value%identityAlignment
A0A0A0K349 Uncharacterized protein9.7e-3264.2Show/hide
Query:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQGGGG-------------KVESKVEDGEERENGLVAE
        MK++ISASLLSAMV YSSLLPFLHSLNLYIS+TIHKNY+FLLCNGLLVFIVRNSGLIG + +E+  G              K+ESKVE  EER NGLV  
Subjt:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQGGGG-------------KVESKVEDGEERENGLVAE

Query:  QEESEKLITEDEEHEE---EEEEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV
        +++ E LIT++E  EE     EEEEEEE D     EELN+KCEEFIRKMKA IKFE QQ+ +
Subjt:  QEESEKLITEDEEHEE---EEEEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV

A0A1S3CG16 gem-associated protein 2-like3.4e-2962.66Show/hide
Query:  MVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQG-------------GGGKVESK--VEDGEERENGLVAEQEESEKLITE
        MV YSSLLPFLHSLNLYIS+TIHKNY+FLLCNGLLVFIVRNSGLIG +  EQ              G  K+ESK  VE  EER NGLV  +E+ E LIT+
Subjt:  MVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQG-------------GGGKVESK--VEDGEERENGLVAEQEESEKLITE

Query:  DE---------EHEEEEEEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV
        +E         E EEEEEEEEEEEE+    +EELN+KCEEFIRKMKA IKFE QQ+ +
Subjt:  DE---------EHEEEEEEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV

A0A6J1C4P4 ATP-dependent RNA helicase MAK53.8e-6097.96Show/hide
Query:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQGGGGKVESKVEDGEERENGLVAEQEESEKLITEDEE
        MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQGGGGKVESKVEDGEERENGLVAEQEESEKLITEDEE
Subjt:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQGGGGKVESKVEDGEERENGLVAEQEESEKLITEDEE

Query:  HEEEEEEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLVY
        H   EEEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLVY
Subjt:  HEEEEEEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLVY

A0A6J1EJY9 uncharacterized protein LOC1114352604.2e-3564.2Show/hide
Query:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQGGG----------------GKVESKVEDGEERENGL
        MK+LISASLLSAMV YSSLLPFLHS NLYISAT HKNY+FLLCNGLLVFIVRNSGLI  SG+   GG                 K+ESKVED EER NGL
Subjt:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQGGG----------------GKVESKVEDGEERENGL

Query:  VAEQEESEKLITEDEEHEEEEEEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV
        + + EESE+ I ED++++++++EEE     G LS EELN+KCEEFIRKMKA IK E QQ+LV
Subjt:  VAEQEESEKLITEDEEHEEEEEEEEEEEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV

A0A6J1I0H9 sodium/potassium/calcium exchanger 1-like2.0e-3767.86Show/hide
Query:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQ-GGGGK----------------VESKVEDGEERENG
        MK++ISAS+LSAMV YSSLLPFLHSLNLYISATIHKNY+FLLCNGLLVFIVRNSGLI  SG EQ GG G                 +E KVEDGEERENG
Subjt:  MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQ-GGGGK----------------VESKVEDGEERENG

Query:  LVAEQE-ESEKLITEDEEHEEEEEEEEEE----EEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV
         +AE+E ESE+L+TE+E+ +E EEE+EEE    EE G LSNEEL++K EEFIRKMKA IK E QQVL+
Subjt:  LVAEQE-ESEKLITEDEEHEEEEEEEEEE----EEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATTCTAATCTCAGCTTCTCTGCTCTCTGCCATGGTGTTGTACTCTTCTCTCCTCCCTTTTCTCCACTCTCTCAACCTCTACATCTCTGCAACTATCCATAAAAA
CTACATCTTTTTGCTCTGCAATGGCCTCCTCGTCTTCATTGTCAGAAATTCCGGCCTCATCGGCGGCTCCGGCGAGGAACAGGGCGGCGGAGGCAAAGTTGAGAGCAAAG
TTGAAGATGGAGAAGAGAGGGAAAATGGGTTGGTTGCAGAACAAGAAGAGAGTGAAAAATTGATAACAGAGGATGAAGAACATGAAGAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGATGGGGGTTTGAGCAATGAGGAATTGAACCAAAAATGTGAAGAATTTATTAGGAAAATGAAGGCAGAAATCAAATTTGAATTACAGCAAGTGCTTGTTTA
T
mRNA sequenceShow/hide mRNA sequence
ATGAAGATTCTAATCTCAGCTTCTCTGCTCTCTGCCATGGTGTTGTACTCTTCTCTCCTCCCTTTTCTCCACTCTCTCAACCTCTACATCTCTGCAACTATCCATAAAAA
CTACATCTTTTTGCTCTGCAATGGCCTCCTCGTCTTCATTGTCAGAAATTCCGGCCTCATCGGCGGCTCCGGCGAGGAACAGGGCGGCGGAGGCAAAGTTGAGAGCAAAG
TTGAAGATGGAGAAGAGAGGGAAAATGGGTTGGTTGCAGAACAAGAAGAGAGTGAAAAATTGATAACAGAGGATGAAGAACATGAAGAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGATGGGGGTTTGAGCAATGAGGAATTGAACCAAAAATGTGAAGAATTTATTAGGAAAATGAAGGCAGAAATCAAATTTGAATTACAGCAAGTGCTTGTTTA
T
Protein sequenceShow/hide protein sequence
MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGSGEEQGGGGKVESKVEDGEERENGLVAEQEESEKLITEDEEHEEEEEEEEE
EEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLVY