CuGenDBv2

Gene ID	MS022308
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	FAS1 domain-containing protein
Genome location	scaffold47:2446829..2447422
RNA-Seq Expression	MS022308
Synteny	MS022308
Gene Ontology terms	NA
InterPro domains	IPR036378 - FAS1 domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004149424.1 uncharacterized protein LOC101220860 [Cucumis sativus]

8.5e-78

78.28

Show/hide

Query:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF
        MAPWF VLLFLV KAHAT  +Q DL+AAMD+MR KSY+GF ILLKILNS+ K LQ S +TFFMPTDQELS   ISPDRLEEFVLSHS+PT LLLNNLLHF
Subjt:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF

Query:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH
        PNG+LVPSSIPNRMI ITNCRKMGVC+NNARIITPNVCL SSIRCHGIST I+YD+ S+SDTLPAKQS  E  V++NE KGAKSLQ+ AMKK  R LH
Subjt:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH

XP_022135856.1 uncharacterized protein LOC111007704 [Momordica charantia]

9.0e-104

99.49

Show/hide

Query:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF
        MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF
Subjt:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF

Query:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH
        PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQ+AAMKKTTRPLH
Subjt:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH

XP_022989473.1 uncharacterized protein LOC111486521 [Cucurbita maxima]

4.0e-75

77.78

Show/hide

Query:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF
        MA WF VLLFLVG A AT  +QTDL+AAMDDMR KSY+GFVILLKILNSS+K L  S +TFFMP DQELS  AISPDR+EEFVLSHS+PT L+LNNLLHF
Subjt:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF

Query:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH
        PNGSLVPSSIPNRMISITNCRKMGVC+NNA+I+TPNVCLNS+IRCHGISTTIAYD  S+SD    KQS  E  V++NEKKGAKSLQ AAMKK  R LH
Subjt:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH

XP_023529797.1 uncharacterized protein LOC111792513 [Cucurbita pepo subsp. pepo]

5.2e-75

76.77

Show/hide

Query:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF
        MA WF VLLFLVG A AT  +QTDL+AAMDDMR KSY+GFVILLKILNSS+K L  S +TFFMP DQELS  AISPDR+EEFVLSHS+PT L+L+NLLHF
Subjt:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF

Query:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH
        PNGSLVPSSIPNRMIS+TNCRKMGVC+NNA+I+TPNVCLNS+IRCHGISTTIAYD  S+SD    K S  E  V++NEKKGAKSLQ AAMKK  RPLH
Subjt:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH

XP_038887869.1 uncharacterized protein LOC120077861 [Benincasa hispida]

3.5e-79

80.3

Show/hide

Query:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF
        MAPWF VLLFLV KA AT I+QTDL+ AMD+MR KSY+GFVILL ILNSS+K LQ S +TFFMP DQELS  AISPD LE+FVLSHSVPT LLLNNLLHF
Subjt:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF

Query:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH
        PNGSLVPSSIPNRMISITNCRKMGVCVNNARI+TPNVCL SSIRCHGIS+TI YD+ S SDTLPAKQS  E  V++NEKK AKSLQ+AAMKK  RPLH
Subjt:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7Q8 FAS1 domain-containing protein

4.1e-78

78.28

Show/hide

Query:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF
        MAPWF VLLFLV KAHAT  +Q DL+AAMD+MR KSY+GF ILLKILNS+ K LQ S +TFFMPTDQELS   ISPDRLEEFVLSHS+PT LLLNNLLHF
Subjt:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF

Query:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH
        PNG+LVPSSIPNRMI ITNCRKMGVC+NNARIITPNVCL SSIRCHGIST I+YD+ S+SDTLPAKQS  E  V++NE KGAKSLQ+ AMKK  R LH
Subjt:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH

A0A5D3E7C1 Fasciclin-like arabinogalactan protein 19

5.2e-73

74.37

Show/hide

Query:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF
        MAPWF VLLFL+ KAHAT  +Q DL+AAMD MR KSY+GF ILLKILNS+ K LQ S +TFFMPTDQELS   ISP+RL++FVLSHS+PT LLLNNLLHF
Subjt:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF

Query:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVS-YSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH
        PNGSLVPSSIPNRMI ITNCRKMGVCVNNARIITPNVCL SSIRCHGIS+ I+YD+ S +SDTLPAKQS  +  V++NE  GAKS ++ AMKK  R LH
Subjt:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVS-YSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH

A0A6J1C1X3 uncharacterized protein LOC111007704

4.4e-104

99.49

Show/hide

Query:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF
        MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF
Subjt:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF

Query:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH
        PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQ+AAMKKTTRPLH
Subjt:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH

A0A6J1ERK4 uncharacterized protein LOC111435225

2.5e-75

76.77

Show/hide

Query:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF
        MA WF VLLFLVG A AT  +QTDL+AAMDDMR KSY+GFVILLKILNSS+K L  S +TFFMP DQELS  AISPDR+EEFVLSHS+PT L+L+NLLHF
Subjt:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF

Query:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH
        PNGSLVPSSIPNRMIS+TNCRKMGVC+NNA+I+TPNVCLNS+IRCHGISTTIAYD  S+SD    K S  E  V++NEKKGAKSLQ AAMKK  RPLH
Subjt:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH

A0A6J1JQD1 uncharacterized protein LOC111486521

1.9e-75

77.78

Show/hide

Query:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF
        MA WF VLLFLVG A AT  +QTDL+AAMDDMR KSY+GFVILLKILNSS+K L  S +TFFMP DQELS  AISPDR+EEFVLSHS+PT L+LNNLLHF
Subjt:  MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHF

Query:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH
        PNGSLVPSSIPNRMISITNCRKMGVC+NNA+I+TPNVCLNS+IRCHGISTTIAYD  S+SD    KQS  E  V++NEKKGAKSLQ AAMKK  R LH
Subjt:  PNGSLVPSSIPNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G16920.1 Fasciclin-like arabinogalactan family protein

1.1e-19

36.91

Show/hide

Query:  DLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQEL--SHVAISPDRLEEFVLSHSVPTPLLLNNLLHFPNGSLVPSSIPNRMISITNCR
        +L  A+++M   +Y  FV+L+ +L S N     + +TF MP D+ L  S++    D + EF+L HS+P+ LL  +L   PNGS+VPSS+P+  + I+N  
Subjt:  DLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQEL--SHVAISPDRLEEFVLSHSVPTPLLLNNLLHFPNGSLVPSSIPNRMISITNCR

Query:  KMGVCVNNARIITPNVCLNSSIRCHGIS------TTIAYDRVSYSDTLP
        +    +NN +II+ N+C   SI+CHGI       +T+  D    + TLP
Subjt:  KMGVCVNNARIITPNVCLNSSIRCHGIS------TTIAYDRVSYSDTLP

AT5G26730.1 Fasciclin-like arabinogalactan family protein

1.7e-36

52.94

Show/hide

Query:  DQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHFPNGSLVPSSIPNRMISITNC
        +QTDL +AM DMR +SYNGFVILL+ LN +N   + + +TF MP+D ++SH  I+P+ LE F+L H++P  L++N++LHFPN +LVP S  +RM +IT  
Subjt:  DQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHFPNGSLVPSSIPNRMISITNC

Query:  RKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDR
           G+ VNNARI+TPNVC NS I CHGIS  I++++
Subjt:  RKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTCCTTGGTTTCTTGTTCTTCTCTTCTTAGTTGGGAAAGCTCACGCTACGGCTATCGACCAGACCGACCTGAAAGCTGCCATGGATGACATGAGATCGAAATCTTA
CAATGGCTTTGTCATACTGCTCAAGATCCTAAATAGCTCCAATAAAGCCTTGCAGTACTCGGGTATGACATTCTTTATGCCCACTGATCAGGAACTATCTCACGTTGCAA
TCTCCCCCGACCGACTTGAAGAATTCGTTCTTAGCCATTCTGTCCCCACACCATTGCTGCTCAACAATCTTCTACACTTCCCAAACGGAAGCCTGGTTCCATCGAGCATC
CCAAACAGAATGATCAGCATAACCAACTGCAGAAAGATGGGTGTCTGTGTGAACAATGCACGAATCATTACCCCGAACGTGTGCTTAAACTCATCTATAAGATGTCATGG
TATAAGCACAACTATTGCATATGACAGAGTTTCCTATTCAGACACTTTACCGGCCAAGCAGAGCATGTTCGAAGCTACAGTTCGGCAGAATGAAAAGAAAGGAGCAAAAT
CTTTACAGACTGCTGCAATGAAGAAGACGACCCGTCCACTACAC

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMTFFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHFPNGSLVPSSI
PNRMISITNCRKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKKGAKSLQTAAMKKTTRPLH

MS022308 (gene) of Bitter gourd (TR) v1 genome