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MS022328 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022328
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycine rich protein
Genome locationscaffold47:2589977..2590477
RNA-Seq ExpressionMS022328
SyntenyMS022328
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3455392.1 hypothetical protein FNV43_RR00015 [Rhamnella rubrinervis]1.7e-1757.38Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYG-GGRHCHHGCC--
        M SKAF+ LGLL A+V+L+SS+V+A+DL  ET  + E  E  +     RG  + G G   GHG  GGGYPGHGG  GGGYPG G  G GG  CH+GCC  
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYG-GGRHCHHGCC--

Query:  GYHG-SCGRCCSYAGEAVDVEP
        GY+G  C RCCSYAGEAVD EP
Subjt:  GYHG-SCGRCCSYAGEAVDVEP

KAF3456111.1 hypothetical protein FNV43_RR00759 [Rhamnella rubrinervis]2.9e-1754.01Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDR-----------GHGHYGGGYDRGHGRYGGGYPGHGGRYGGGYP-----GRG
        M SKAF+ LGLL A+V+L+SS+V+A+DL  ET  + E  E  +     R           GHG  GGGY  GHG  GGGYPGHGG  GGGYP     GRG
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDR-----------GHGHYGGGYDRGHGRYGGGYPGHGGRYGGGYP-----GRG

Query:  RYGGGRHCHHGCC--GYHG-SCGRCCSYAGEAVDVEP
        R  GG  C++GCC  GY+G  C RCCSYAGEAVD EP
Subjt:  RYGGGRHCHHGCC--GYHG-SCGRCCSYAGEAVDVEP

KAG8369563.1 hypothetical protein BUALT_Bualt14G0026400 [Buddleja alternifolia]1.9e-1653.68Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKG-----ETVMETEG-VEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYGG------
        M SKA + LGL  A VLL+SS+V A+DL       +T  ET G V DAK      G G+YGGGY  G G YGGGYPG GG YGGGYPGRG YGG      
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKG-----ETVMETEG-VEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYGG------

Query:  ----GRHCHHGCCG---YHGSCGRCCSYAGEAVDVE
            G +C +GCCG   Y GSC RCCS+AGE  D +
Subjt:  ----GRHCHHGCCG---YHGSCGRCCSYAGEAVDVE

PON59146.1 Glycine rich protein [Trema orientale]3.8e-1751.43Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDL----KGE------TVMETEGVEDAK----------DRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYGGGY
        M+SK F+LLGL  A++LL+SS+V A+DL     GE      +  E   V+DAK             Y  G G YGGGY  G G YGGGYPG  G YGGGY
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDL----KGE------TVMETEGVEDAK----------DRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYGGGY

Query:  PGRGRYGGGRHCHHGCC--GYHG-SCGRCCSYAGEAVDVE
        PGRG YGG   C++GCC   Y+G  C RCCSYAGEAVD +
Subjt:  PGRGRYGGGRHCHHGCC--GYHG-SCGRCCSYAGEAVDVE

XP_022136254.1 glycine-rich protein 3 short isoform-like [Momordica charantia]6.0e-5594.92Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYGGGRHCHHGCCGYH
        M+SKAFILLGLLFAVV+LLSSDVTA+DLKGETVMET+GVEDAKDRSYDRGHGHYGGGYDRGH RYGGGYPGHGG YGGGYPGRGRYGGGRHCHHGCCGYH
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYGGGRHCHHGCCGYH

Query:  GSCGRCCSYAGEAVDVEP
        GSCGRCCSYAGEAVDVEP
Subjt:  GSCGRCCSYAGEAVDVEP

TrEMBL top hitse value%identityAlignment
A0A067ETQ7 Uncharacterized protein1.1e-1452.59Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDL---------KGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYG-GGYPGRGRYG---
        M SK F++LGLL ++VLL+SS+  A+DL          GE   ET GV+DAK   Y+ G+G Y GG   G G Y GGYPG GGR G GGYPGRG YG   
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDL---------KGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYG-GGYPGRGRYG---

Query:  ---GGRHCHHGCC--GYHGSCGRCCSYAGEAVDVE
           GG +C +GCC  GY+G   RCCSYAGEAV+ +
Subjt:  ---GGRHCHHGCC--GYHGSCGRCCSYAGEAVDVE

A0A2H5PLF8 Uncharacterized protein3.9e-1553.33Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDL---------KGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYG-GGYPGRGRYG---
        M SK F++LGLL ++VLL+SS+V A+DL          GE   ET GV+DAK   Y+ G+G Y GG   G G Y GGYPG GGR G GGYPGRG YG   
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDL---------KGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYG-GGYPGRGRYG---

Query:  ---GGRHCHHGCC--GYHGSCGRCCSYAGEAVDVE
           GG +C +GCC  GY+G   RCCSYAGEAV+ +
Subjt:  ---GGRHCHHGCC--GYHGSCGRCCSYAGEAVDVE

A0A2P5CDK7 Glycine rich protein1.9e-1751.43Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDL----KGE------TVMETEGVEDAK----------DRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYGGGY
        M+SK F+LLGL  A++LL+SS+V A+DL     GE      +  E   V+DAK             Y  G G YGGGY  G G YGGGYPG  G YGGGY
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDL----KGE------TVMETEGVEDAK----------DRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYGGGY

Query:  PGRGRYGGGRHCHHGCC--GYHG-SCGRCCSYAGEAVDVE
        PGRG YGG   C++GCC   Y+G  C RCCSYAGEAVD +
Subjt:  PGRGRYGGGRHCHHGCC--GYHG-SCGRCCSYAGEAVDVE

A0A6J1C3T3 glycine-rich protein 3 short isoform-like2.9e-5594.92Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYGGGRHCHHGCCGYH
        M+SKAFILLGLLFAVV+LLSSDVTA+DLKGETVMET+GVEDAKDRSYDRGHGHYGGGYDRGH RYGGGYPGHGG YGGGYPGRGRYGGGRHCHHGCCGYH
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYGGGRHCHHGCCGYH

Query:  GSCGRCCSYAGEAVDVEP
        GSCGRCCSYAGEAVDVEP
Subjt:  GSCGRCCSYAGEAVDVEP

V4U4R7 Uncharacterized protein3.9e-1553.33Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDL---------KGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYG-GGYPGRGRYG---
        M SK F++LGLL ++VLL+SS+V A+DL          GE   ET GV+DAK   Y+ G+G Y GG   G G Y GGYPG GGR G GGYPGRG YG   
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDL---------KGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYG-GGYPGRGRYG---

Query:  ---GGRHCHHGCC--GYHGSCGRCCSYAGEAVDVE
           GG +C +GCC  GY+G   RCCSYAGEAV+ +
Subjt:  ---GGRHCHHGCC--GYHGSCGRCCSYAGEAVDVE

SwissProt top hitse value%identityAlignment
O22612 Dormancy-associated protein 27.5e-0847.41Show/hide
Query:  SSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHG-HYGGGYDRGHGRY---------GGGYPGHGGRYGGG---YPGRGRYGG
        S KA ++LGLL A+VLL+SS+V+A++L  E V +++ V DAK   Y RG G H GGGY  G G Y         GGGY G GG + GG   + G G Y G
Subjt:  SSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHG-HYGGGYDRGHGRY---------GGGYPGHGGRYGGG---YPGRGRYGG

Query:  GRHCHHGCCGYHGSCG
        G   H+G  GYHG  G
Subjt:  GRHCHHGCCGYHGSCG

P23137 Glycine-rich protein7.0e-0644.92Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDL-KGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYGGGRHCHHGCC--
        M SKAF+ LGL  A   L+SS+V A +L +    M+ +G E+  D     G+   G     G G YGGG     GR GGGY  RG       C +GCC  
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDL-KGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYGGGRHCHHGCC--

Query:  GYHGSCGRCCSYAGEAVD
        GY+G C RCCSYAGEA+D
Subjt:  GYHGSCGRCCSYAGEAVD

P37703 Glycine-rich protein DC9.11.2e-0546.38Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHY--GGGYDRGHGRY--GGGYPGHGGRY--GGGY-PGRGRY--GGGRH
        M SK F+LLGL  A  +L+SS+V A++L  ET  +TEG  +     Y  G G Y  GGGY  G G Y  GGGY   GG Y  GGGY  G G Y  GGG H
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHY--GGGYDRGHGRY--GGGYPGHGGRY--GGGY-PGRGRY--GGGRH

Query:  ----------CHHGCCG--YHGSCGRCCSYAGEAVDVE
                   HHG  G  YH   GRCCS A EA  +E
Subjt:  ----------CHHGCCG--YHGSCGRCCSYAGEAVDVE

Q9SL15 Glycine-rich protein 34.7e-1045.52Show/hide
Query:  MSSKAFILLGLLFAVVLLLS-----SDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHYGGG--YDRGHGRY---GGGYPGHGGRYGGG----YPGRGRY
        M+SKA +LLG LFAV+L++S     S  T      ETV   +        +Y+ G G+ GGG  Y  G G Y   GG Y G GGRY GG      G GRY
Subjt:  MSSKAFILLGLLFAVVLLLS-----SDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHYGGG--YDRGHGRY---GGGYPGHGGRYGGG----YPGRGRY

Query:  --GGGR---------HCHHGCC--GYHGSCGRCCSYAGEAVDVEP
          GGGR         +C HGCC  GY+G C RCCSYAGEAV  +P
Subjt:  --GGGR---------HCHHGCC--GYHGSCGRCCSYAGEAVDVEP

Q9ZSJ6 Glycine-rich protein 3 short isoform1.2e-1050.83Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHY-GGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYGGGRHCHHGCC--
        M+SK  +LLG LFA + ++S    A  +K E+  ET   E       D G G Y GGG   GHG  GGGY G GGRY GG  G  + GGG +C HGCC  
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHY-GGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYGGGRHCHHGCC--

Query:  GYHGSCGRCCSYAGEAVDVE
        GYHG C RCCSYAGEAV  +
Subjt:  GYHGSCGRCCSYAGEAVDVE

Arabidopsis top hitse value%identityAlignment
AT2G05380.1 glycine-rich protein 3 short isoform8.8e-1250.83Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHY-GGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYGGGRHCHHGCC--
        M+SK  +LLG LFA + ++S    A  +K E+  ET   E       D G G Y GGG   GHG  GGGY G GGRY GG  G  + GGG +C HGCC  
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHY-GGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYGGGRHCHHGCC--

Query:  GYHGSCGRCCSYAGEAVDVE
        GYHG C RCCSYAGEAV  +
Subjt:  GYHGSCGRCCSYAGEAVDVE

AT2G05520.3 glycine-rich protein 31.1e-1147.33Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRY---GGGYPGHGGRYGGG----YPGRGRYG----GG
        M+SKA +LLG LFAV+L++S    A        + +E  E  K     RG+G  GG Y+ G G Y   GG Y G GGRY GG      G GR G    GG
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRY---GGGYPGHGGRYGGG----YPGRGRYG----GG

Query:  RHCHHGCC--GYHGSCGRCCSYAGEAVDVEP
         +C HGCC  GY+G C RCCSYAGEAV  +P
Subjt:  RHCHHGCC--GYHGSCGRCCSYAGEAVDVEP

AT2G05520.5 glycine-rich protein 35.2e-1247.97Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRY---GGGYPGHGGRYGGGYPGRGRYGGGRHCHHGCC
        M+SKA +LLG LFAV+L++S    A        + +E  E  K     RG+G  GG Y+ G GRY   GG Y G GGR GGG        GG +C HGCC
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRY---GGGYPGHGGRYGGGYPGRGRYGGGRHCHHGCC

Query:  --GYHGSCGRCCSYAGEAVDVEP
          GY+G C RCCSYAGEAV  +P
Subjt:  --GYHGSCGRCCSYAGEAVDVEP

AT2G05520.6 glycine-rich protein 38.8e-1248.78Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGG--YPGHGGRYGGGYPGRGRYG-GGRHCHHGCC
        M+SKA +LLG LFAV+L++S    A        + +E  E  K     RG+G  GG Y+ G G  GGG  Y G GGRY GG   +G  G GG +C HGCC
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGG--YPGHGGRYGGGYPGRGRYG-GGRHCHHGCC

Query:  --GYHGSCGRCCSYAGEAVDVEP
          GY+G C RCCSYAGEAV  +P
Subjt:  --GYHGSCGRCCSYAGEAVDVEP

AT2G05530.1 Glycine-rich protein family1.8e-1245.6Show/hide
Query:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHG-----HYGGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYGGGRHCHHG
        M+SKA +L G LFAV+L+++    A        +++E  E  +   Y+ GHG     + GGGY+ G G  GGGY G GG  GGG+ GR  Y     C +G
Subjt:  MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHG-----HYGGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYGGGRHCHHG

Query:  CC--GYHGSCGRCCSYAGEAVDVEP
        CC  GYHG C RCCSYAGEAV  +P
Subjt:  CC--GYHGSCGRCCSYAGEAVDVEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAAGGCTTTCATCCTCCTAGGCCTTCTCTTCGCCGTCGTCCTCCTCCTCTCCTCGGACGTCACAGCAAAAGACCTGAAAGGCGAAACCGTGATGGAGACCGA
GGGAGTAGAGGATGCCAAGGACCGGAGTTATGACCGTGGCCACGGTCATTATGGCGGAGGCTATGACAGAGGCCACGGTCGTTACGGTGGAGGCTACCCGGGACATGGCG
GCCGCTATGGAGGAGGCTACCCGGGGCGTGGTCGTTATGGCGGTGGACGCCATTGCCACCACGGTTGCTGCGGTTACCACGGCAGTTGCGGGAGGTGCTGCAGCTATGCT
GGTGAGGCTGTTGATGTAGAACCC
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAAGGCTTTCATCCTCCTAGGCCTTCTCTTCGCCGTCGTCCTCCTCCTCTCCTCGGACGTCACAGCAAAAGACCTGAAAGGCGAAACCGTGATGGAGACCGA
GGGAGTAGAGGATGCCAAGGACCGGAGTTATGACCGTGGCCACGGTCATTATGGCGGAGGCTATGACAGAGGCCACGGTCGTTACGGTGGAGGCTACCCGGGACATGGCG
GCCGCTATGGAGGAGGCTACCCGGGGCGTGGTCGTTATGGCGGTGGACGCCATTGCCACCACGGTTGCTGCGGTTACCACGGCAGTTGCGGGAGGTGCTGCAGCTATGCT
GGTGAGGCTGTTGATGTAGAACCC
Protein sequenceShow/hide protein sequence
MSSKAFILLGLLFAVVLLLSSDVTAKDLKGETVMETEGVEDAKDRSYDRGHGHYGGGYDRGHGRYGGGYPGHGGRYGGGYPGRGRYGGGRHCHHGCCGYHGSCGRCCSYA
GEAVDVEP