; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022330 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022330
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationscaffold47:2611101..2611517
RNA-Seq ExpressionMS022330
SyntenyMS022330
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647336.1 hypothetical protein Csa_003380 [Cucumis sativus]1.1e-4769.34Show/hide
Query:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR
        MSVEILDSATI+NFVED+ AFGA+IR+RF HLD +RDG+LSY+EML+ELH+LRV+ETHFG+D KPDPDELS +Y ++F QFDR+S+G VDL+EF A TKR
Subjt:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR

Query:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKAAKVA
        +M+A+A GMGFLP+QM LEE  FLMKAV+   A   A
Subjt:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKAAKVA

XP_011657544.1 uncharacterized protein LOC105435869 [Cucumis sativus]1.1e-4769.34Show/hide
Query:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR
        MSVEILDSATI+NFVED+ AFGA+IR+RF HLD +RDG+LSY+EML+ELH+LRV+ETHFG+D KPDPDELS +Y ++F QFDR+S+G VDL+EF A TKR
Subjt:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR

Query:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKAAKVA
        +M+A+A GMGFLP+QM LEE  FLMKAV+   A   A
Subjt:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKAAKVA

XP_022135904.1 uncharacterized protein LOC111007741 [Momordica charantia]9.9e-6596.24Show/hide
Query:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR
        MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVF QFDRNSNGEVDLEEFMAGTKR
Subjt:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR

Query:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKA
        IMVAIAEGMGFLPLQMALEEDGFLMKAV   K+
Subjt:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKA

XP_038887184.1 uncharacterized protein LOC120077371 [Benincasa hispida]1.0e-4874.07Show/hide
Query:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR
        MSVE+LD ATI+NFVEDEEAF  W RE F HLD D DG LSYAEML+ELHSLRV E  FG D KPD D+LSRLYGAVF QFDR+SNG+VD++EFM G K 
Subjt:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR

Query:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKAAK
        +M+AIAEGMGFLP+QMALE+DGFLMKAV  R+A K
Subjt:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKAAK

XP_038888297.1 uncharacterized protein LOC120078146 [Benincasa hispida]4.2e-4769.57Show/hide
Query:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR
        MSVEILDSATI+NFVED+ AFGA+IR+RF HLD + DG+LSY EML+ELH+LRV+ETHFG+D KPDPDELS +Y ++F QFDR+S+G VDL+EFMA TKR
Subjt:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR

Query:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKAAKVAA
        +M+ +A GMGFLP+QM LEE  FLMKAV+ R+ A +AA
Subjt:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKAAKVAA

TrEMBL top hitse value%identityAlignment
A0A0A0KHT7 Uncharacterized protein5.3e-4869.34Show/hide
Query:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR
        MSVEILDSATI+NFVED+ AFGA+IR+RF HLD +RDG+LSY+EML+ELH+LRV+ETHFG+D KPDPDELS +Y ++F QFDR+S+G VDL+EF A TKR
Subjt:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR

Query:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKAAKVA
        +M+A+A GMGFLP+QM LEE  FLMKAV+   A   A
Subjt:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKAAKVA

A0A2H5PLI2 Uncharacterized protein3.5e-4768.12Show/hide
Query:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR
        MSVE+LDSATI++FVEDEEAF   IR RF HLD D DG+LSYAEM+QEL SLRV+ETHFG+D KPDP+EL+ +Y ++F QFD +SNG VDLEEF A TK+
Subjt:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR

Query:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKAAKVAA
        +M+A+A G+GFLP+QM LEED FLMKAV+    AK AA
Subjt:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKAAKVAA

A0A5D3DDG8 Calcium-binding EF-hand family protein3.5e-4769.57Show/hide
Query:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR
        MSVEILDSATI+NFVEDEEAF  WIRERF HLD DRDGVL Y EML+EL SLRV+ETHFG+D KPDP+ELS +Y ++F QFDR+ NG+VDL EFMA TK+
Subjt:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR

Query:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKAAKVAA
        +M+A+A G+G  P+QM LEE+ FL KAVD R++ K+AA
Subjt:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKAAKVAA

A0A6J1C2T1 uncharacterized protein LOC1110077414.8e-6596.24Show/hide
Query:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR
        MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVF QFDRNSNGEVDLEEFMAGTKR
Subjt:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR

Query:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKA
        IMVAIAEGMGFLPLQMALEEDGFLMKAV   K+
Subjt:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKA

V4U9W3 Uncharacterized protein3.5e-4768.12Show/hide
Query:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR
        MSVE+LDSATI++FVEDEEAF   IR RF HLD D DG+LSYAEM+QEL SLRV+ETHFG+D KPDP+EL+ +Y ++F QFD +SNG VDLEEF A TK+
Subjt:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR

Query:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKAAKVAA
        +M+A+A G+GFLP+QM LEED FLMKAV+    AK AA
Subjt:  IMVAIAEGMGFLPLQMALEEDGFLMKAVDPRKAAKVAA

SwissProt top hitse value%identityAlignment
Q09711 Calcium-binding protein NCS-17.8e-0432.88Show/hide
Query:  FRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKP-DPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR
        F+  D D +G++SY EML+ + +  +Y+    +   P D D   +    +F   D+N +G++ LEEF  G+KR
Subjt:  FRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKP-DPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR

Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein2.6e-1029.84Show/hide
Query:  ILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKRIMVA
        ++ S T+I F+ D ++F +   + F+ LD D++G+LS +E+ Q L+++   E+          DE   +Y A+F +F      ++  + F      I+ A
Subjt:  ILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKRIMVA

Query:  IAEGMGFLPLQMALEEDGFLMKAV
        +A G+G  P+ M +  DG +MKAV
Subjt:  IAEGMGFLPLQMALEEDGFLMKAV

AT2G44310.1 Calcium-binding EF-hand family protein7.1e-2945.8Show/hide
Query:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR
        M V ++D +T+ +FV+DEE F   + ERF  LD ++DGVLS +E+ +   S+R+ E+HFGVD     DEL+ LY ++F +FD + +G VDLEEF +  K+
Subjt:  MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKR

Query:  IMVAIAEGMGFLPLQMAL--EEDGFLMKAVD
        I++AIA+G+G  P+ M L  ++D FL KA D
Subjt:  IMVAIAEGMGFLPLQMAL--EEDGFLMKAVD

AT4G38810.2 Calcium-binding EF-hand family protein3.1e-0826.89Show/hide
Query:  EILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKRIMV
        ++LD + I+  VE+E+ F  ++ ++F+ LD D DG LS  E+   +  +       G+ A+    +   +Y  V  +F   S  +V   EF      I++
Subjt:  EILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKRIMV

Query:  AIAEGMGFLPLQMALEEDG
         +A G+   P+ + L  DG
Subjt:  AIAEGMGFLPLQMALEEDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTAGAAATTCTAGACAGCGCCACCATAATCAACTTCGTGGAAGACGAGGAAGCATTCGGCGCGTGGATCAGAGAGCGTTTCAGGCACCTCGACGCCGACCGTGA
CGGCGTGCTCTCCTACGCCGAGATGCTGCAGGAGTTGCACAGCCTCAGAGTCTACGAAACCCACTTCGGGGTCGATGCGAAACCCGACCCCGACGAGCTCTCCCGCCTCT
ACGGGGCCGTGTTCACGCAGTTTGATCGGAACTCAAACGGAGAAGTTGATCTGGAGGAGTTCATGGCGGGAACTAAGAGGATCATGGTGGCCATTGCTGAGGGAATGGGA
TTCTTGCCGCTCCAAATGGCGTTGGAAGAAGATGGATTCTTGATGAAAGCCGTCGATCCGAGAAAAGCCGCCAAAGTGGCTGCTAAT
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTAGAAATTCTAGACAGCGCCACCATAATCAACTTCGTGGAAGACGAGGAAGCATTCGGCGCGTGGATCAGAGAGCGTTTCAGGCACCTCGACGCCGACCGTGA
CGGCGTGCTCTCCTACGCCGAGATGCTGCAGGAGTTGCACAGCCTCAGAGTCTACGAAACCCACTTCGGGGTCGATGCGAAACCCGACCCCGACGAGCTCTCCCGCCTCT
ACGGGGCCGTGTTCACGCAGTTTGATCGGAACTCAAACGGAGAAGTTGATCTGGAGGAGTTCATGGCGGGAACTAAGAGGATCATGGTGGCCATTGCTGAGGGAATGGGA
TTCTTGCCGCTCCAAATGGCGTTGGAAGAAGATGGATTCTTGATGAAAGCCGTCGATCCGAGAAAAGCCGCCAAAGTGGCTGCTAAT
Protein sequenceShow/hide protein sequence
MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFGVDAKPDPDELSRLYGAVFTQFDRNSNGEVDLEEFMAGTKRIMVAIAEGMG
FLPLQMALEEDGFLMKAVDPRKAAKVAAN