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MS022332 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022332
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationscaffold47:2626305..2626715
RNA-Seq ExpressionMS022332
SyntenyMS022332
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589130.1 hypothetical protein SDJN03_17695, partial [Cucurbita argyrosperma subsp. sororia]1.0e-5884.67Show/hide
Query:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK
        MSVE+LDGATIVNFVED+EVFGAIVRERFSHLD D DGVLSY EMLRELQSLRV ETHFGIDVKPDPDE+S+VYGSLFL FDRDCNGKVD+GEFM ETKK
Subjt:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA
        MM+AMANGIG  P+QMVLEEN  LK+AVERE+TK+ A
Subjt:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA

XP_022136066.1 uncharacterized protein LOC111007849 [Momordica charantia]1.2e-6797.81Show/hide
Query:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK
        MSVELLDGATIV+FVEDEEVFGA V+ERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK
Subjt:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA
        MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA
Subjt:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA

XP_022930660.1 uncharacterized protein LOC111437061 [Cucurbita moschata]1.8e-5884.67Show/hide
Query:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK
        MSVE+LD ATIVNFVED+EVFGAIVRERFSHLD D DGVLSY EMLRELQSLRV ETHFGIDVKPDPDE+S+VYGSLFL FDRDC+GKVD+GEFM ETKK
Subjt:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA
        MM+AMANGIG  P+QMVLEEN FLKKAVERE+TK+ A
Subjt:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA

XP_023529817.1 uncharacterized protein LOC111792531 [Cucurbita pepo subsp. pepo]2.3e-5885.4Show/hide
Query:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK
        MSVE+LDGATIVNFVED+EVFGAIVRERFSHLD D DGVLSY EMLRELQSLRV ETHFGIDVKPDPDE+S+VYGSLFL FDRD NGKVD+GEFM ETKK
Subjt:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA
        MM+AMANGIG  P+QMVLEEN FLKKAVERE+TK+ A
Subjt:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA

XP_023529818.1 uncharacterized protein LOC111792532 [Cucurbita pepo subsp. pepo]3.2e-6086.86Show/hide
Query:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK
        MSVE+LDGATIVNFVED+EVFGAIVRERFSHLD D DGVLSY EMLRELQSLRV ETHFGIDVKPDPDE+S+VYGSLFL FDRDCNGKVD+GEFM ETKK
Subjt:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA
        MM+AMANGIGLLP+QMVLEEN  LKKAVERE+TK+ A
Subjt:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA

TrEMBL top hitse value%identityAlignment
A0A1S3C1T0 uncharacterized protein LOC1034956553.3e-5883.21Show/hide
Query:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK
        MSVE+LD ATIVNFVEDEE F   +RERFSHLD DRDGVL YGEML+ELQSLRV ETHFGID KPDP+E+S+VY SLFL FDRDCNGKVDLGEFMAETKK
Subjt:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA
        MMLAMANGIGL P+QM+LEEN FLKKAV+RE+TKLAA
Subjt:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA

A0A5D3DDG8 Calcium-binding EF-hand family protein3.3e-5883.21Show/hide
Query:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK
        MSVE+LD ATIVNFVEDEE F   +RERFSHLD DRDGVL YGEML+ELQSLRV ETHFGID KPDP+E+S+VY SLFL FDRDCNGKVDLGEFMAETKK
Subjt:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA
        MMLAMANGIGL P+QM+LEEN FLKKAV+RE+TKLAA
Subjt:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA

A0A6J1C2G7 uncharacterized protein LOC1110078496.0e-6897.81Show/hide
Query:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK
        MSVELLDGATIV+FVEDEEVFGA V+ERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK
Subjt:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA
        MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA
Subjt:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA

A0A6J1EXF9 uncharacterized protein LOC1114370618.6e-5984.67Show/hide
Query:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK
        MSVE+LD ATIVNFVED+EVFGAIVRERFSHLD D DGVLSY EMLRELQSLRV ETHFGIDVKPDPDE+S+VYGSLFL FDRDC+GKVD+GEFM ETKK
Subjt:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA
        MM+AMANGIG  P+QMVLEEN FLKKAVERE+TK+ A
Subjt:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA

A0A6J1JEK7 uncharacterized protein LOC1114862004.3e-5884.67Show/hide
Query:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK
        MSVE+LDGATIVNFVED+EVFGAIVRERFSHLD D DGVLSY EMLRELQSLRV ETHFGIDVKPDPDE+S+VYGSLFL FDRD +GKVD+GEFM ETKK
Subjt:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA
        MM+AMANGIGL P+QMVLEEN  LKKAVERE+TK+ A
Subjt:  MMLAMANGIGLLPIQMVLEENGFLKKAVERETTKLAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein1.9e-1032.03Show/hide
Query:  LLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKKMMLA
        ++   T++ F+ D + F +I  + F  LD D++G+LS  E+ + L ++  +E+    +V P  DE   VY ++F  F  D   K +  + +AE   ++ A
Subjt:  LLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKKMMLA

Query:  MANGIGLLPIQMVLEENGFLKKAVERET
        MA GIG  P+ MV+  +G + KAV  E+
Subjt:  MANGIGLLPIQMVLEENGFLKKAVERET

AT2G44310.1 Calcium-binding EF-hand family protein5.2e-3249.64Show/hide
Query:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK
        M V L+DG+T+ +FV+DEE F   V ERF+ LD ++DGVLS  E+ +  +S+R+LE+HFG+DV    DE++ +Y S+F  FD D +G VDL EF +E KK
Subjt:  MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGLLPIQMVL--EENGFLKKAVERETTKL
        ++LA+A+G+G  PI MVL  +++ FLKKA + E +KL
Subjt:  MMLAMANGIGLLPIQMVL--EENGFLKKAVERETTKL

AT4G38810.2 Calcium-binding EF-hand family protein3.1e-0831.09Show/hide
Query:  ELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKKMML
        ++LDG+ IV  VE+E+VF   V ++F  LD D DG LS  E+   +  +            PD D    +Y  +   F      KV   EF      ++L
Subjt:  ELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKKMML

Query:  AMANGIGLLPIQMVLEENG
         MA G+   PI ++L  +G
Subjt:  AMANGIGLLPIQMVLEENG

AT5G28830.1 calcium-binding EF hand family protein7.1e-0521.88Show/hide
Query:  VELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKKMM
        V +LDG  +  F+EDE+ F  +    F+ LD +  G L   E+ + L        H G+++   P     +   +    D D + ++   +F    ++++
Subjt:  VELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKKMM

Query:  LAMANGIGLLPIQMVLEENGFLKKAVER
          +A+ +   PI +VL    F    + +
Subjt:  LAMANGIGLLPIQMVLEENGFLKKAVER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTAGAACTTCTGGACGGTGCCACGATTGTGAACTTCGTGGAAGACGAAGAAGTTTTTGGCGCGATTGTCAGAGAGCGTTTCAGTCATCTAGATAGTGATAGAGA
TGGTGTTCTTTCGTACGGAGAGATGCTGAGGGAATTGCAGAGTCTTCGGGTTTTGGAGACGCATTTCGGGATCGATGTGAAACCCGACCCCGATGAGGTTTCTGCTGTTT
ACGGGTCGTTGTTTTTGCTATTCGATCGGGACTGCAATGGGAAAGTTGATCTGGGAGAGTTCATGGCAGAGACCAAGAAGATGATGCTGGCCATGGCCAATGGGATTGGC
CTTTTGCCCATTCAGATGGTGCTTGAAGAAAATGGCTTCTTGAAGAAAGCTGTGGAGAGAGAAACCACGAAACTGGCTGCT
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTAGAACTTCTGGACGGTGCCACGATTGTGAACTTCGTGGAAGACGAAGAAGTTTTTGGCGCGATTGTCAGAGAGCGTTTCAGTCATCTAGATAGTGATAGAGA
TGGTGTTCTTTCGTACGGAGAGATGCTGAGGGAATTGCAGAGTCTTCGGGTTTTGGAGACGCATTTCGGGATCGATGTGAAACCCGACCCCGATGAGGTTTCTGCTGTTT
ACGGGTCGTTGTTTTTGCTATTCGATCGGGACTGCAATGGGAAAGTTGATCTGGGAGAGTTCATGGCAGAGACCAAGAAGATGATGCTGGCCATGGCCAATGGGATTGGC
CTTTTGCCCATTCAGATGGTGCTTGAAGAAAATGGCTTCTTGAAGAAAGCTGTGGAGAGAGAAACCACGAAACTGGCTGCT
Protein sequenceShow/hide protein sequence
MSVELLDGATIVNFVEDEEVFGAIVRERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGIDVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKKMMLAMANGIG
LLPIQMVLEENGFLKKAVERETTKLAA