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MS022338 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022338
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2
Genome locationscaffold47:2646521..2646969
RNA-Seq ExpressionMS022338
SyntenyMS022338
Gene Ontology termsGO:0000741 - karyogamy (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039497.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]4.7e-2375.82Show/hide
Query:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE
        MAS AARAIFRS S    KA + L+ GARAAPARSPFRI++K  FS  + RIP+EMSF VESMLPFHSATSSALMTSMLSVSP SYGWLSE
Subjt:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE

TYK15251.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]4.7e-2375.82Show/hide
Query:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE
        MAS AARAIFRS S    KA + L+ GARAAPARSPFRI++K  FS  + RIP+EMSF VESMLPFHSATSSALMTSMLSVSP SYGWLSE
Subjt:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE

XP_022136010.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Momordica charantia]3.4e-3798.9Show/hide
Query:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE
        MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSF VESMLPFHSATSSALMTSMLSVSPRSYGWLSE
Subjt:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE

XP_022136011.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Momordica charantia]3.4e-3798.9Show/hide
Query:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE
        MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSF VESMLPFHSATSSALMTSMLSVSPRSYGWLSE
Subjt:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE

XP_022136012.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Momordica charantia]3.4e-3798.9Show/hide
Query:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE
        MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSF VESMLPFHSATSSALMTSMLSVSPRSYGWLSE
Subjt:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE

TrEMBL top hitse value%identityAlignment
A0A5A7TDD1 Protein NUCLEAR FUSION DEFECTIVE 62.3e-2375.82Show/hide
Query:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE
        MAS AARAIFRS S    KA + L+ GARAAPARSPFRI++K  FS  + RIP+EMSF VESMLPFHSATSSALMTSMLSVSP SYGWLSE
Subjt:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE

A0A5D3CTR8 Protein NUCLEAR FUSION DEFECTIVE 62.3e-2375.82Show/hide
Query:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE
        MAS AARAIFRS S    KA + L+ GARAAPARSPFRI++K  FS  + RIP+EMSF VESMLPFHSATSSALMTSMLSVSP SYGWLSE
Subjt:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE

A0A6J1C2B4 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.6e-3798.9Show/hide
Query:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE
        MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSF VESMLPFHSATSSALMTSMLSVSPRSYGWLSE
Subjt:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE

A0A6J1C2N3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.6e-3798.9Show/hide
Query:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE
        MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSF VESMLPFHSATSSALMTSMLSVSPRSYGWLSE
Subjt:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE

A0A6J1C4D4 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X31.6e-3798.9Show/hide
Query:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE
        MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSF VESMLPFHSATSSALMTSMLSVSPRSYGWLSE
Subjt:  MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial3.3e-1149.44Show/hide
Query:  SAARAIFRSCSA-SGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE
        S AR++ R+ S+ S   +T R A+ A++AP    FR + + S     +R PVE+SF VES+LP+HSAT+SALMTS LS+S ++YGWLS+
Subjt:  SAARAIFRSCSA-SGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein6.4e-1044.32Show/hide
Query:  SAARAIFRSCSASGFKATSRLATGARAAP--ARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWL
        SAAR++FRS ++       R + G +  P  AR+ FR+  +   +    R PVE+S  VE+MLP+H+AT+SAL+ SMLSVS R  GW+
Subjt:  SAARAIFRSCSASGFKATSRLATGARAAP--ARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWL

AT1G28395.2 unknown protein6.4e-1044.32Show/hide
Query:  SAARAIFRSCSASGFKATSRLATGARAAP--ARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWL
        SAAR++FRS ++       R + G +  P  AR+ FR+  +   +    R PVE+S  VE+MLP+H+AT+SAL+ SMLSVS R  GW+
Subjt:  SAARAIFRSCSASGFKATSRLATGARAAP--ARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWL

AT2G20585.1 nuclear fusion defective 62.3e-1249.44Show/hide
Query:  SAARAIFRSCSA-SGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE
        S AR++ R+ S+ S   +T R A+ A++AP    FR + + S     +R PVE+SF VES+LP+HSAT+SALMTS LS+S ++YGWLS+
Subjt:  SAARAIFRSCSA-SGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE

AT2G20585.2 nuclear fusion defective 62.3e-1249.44Show/hide
Query:  SAARAIFRSCSA-SGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE
        S AR++ R+ S+ S   +T R A+ A++AP    FR + + S     +R PVE+SF VES+LP+HSAT+SALMTS LS+S ++YGWLS+
Subjt:  SAARAIFRSCSA-SGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE

AT2G20585.3 nuclear fusion defective 62.3e-1249.44Show/hide
Query:  SAARAIFRSCSA-SGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE
        S AR++ R+ S+ S   +T R A+ A++AP    FR + + S     +R PVE+SF VES+LP+HSAT+SALMTS LS+S ++YGWLS+
Subjt:  SAARAIFRSCSA-SGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCCGCCGCCAGGGCCATTTTCCGATCCTGCTCCGCCTCAGGTTTCAAGGCAACCTCTCGTCTGGCCACCGGAGCCAGAGCAGCTCCAGCTCGTTCACCATT
TCGCATTTCGACTAAACCAAGTTTCTCTCAATGTGCTGTAAGGATTCCTGTGGAAATGAGCTTCGGTGTGGAGTCGATGCTTCCGTTCCATTCGGCTACTTCTTCGGCAT
TGATGACTTCAATGCTTTCTGTCTCTCCACGTAGTTATGGTTGGCTTTCAGAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTCCGCCGCCAGGGCCATTTTCCGATCCTGCTCCGCCTCAGGTTTCAAGGCAACCTCTCGTCTGGCCACCGGAGCCAGAGCAGCTCCAGCTCGTTCACCATT
TCGCATTTCGACTAAACCAAGTTTCTCTCAATGTGCTGTAAGGATTCCTGTGGAAATGAGCTTCGGTGTGGAGTCGATGCTTCCGTTCCATTCGGCTACTTCTTCGGCAT
TGATGACTTCAATGCTTTCTGTCTCTCCACGTAGTTATGGTTGGCTTTCAGAA
Protein sequenceShow/hide protein sequence
MASSAARAIFRSCSASGFKATSRLATGARAAPARSPFRISTKPSFSQCAVRIPVEMSFGVESMLPFHSATSSALMTSMLSVSPRSYGWLSE