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MS022344 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022344
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionhomeobox-DDT domain protein RLT2 isoform X2
Genome locationscaffold47:2672484..2672753
RNA-Seq ExpressionMS022344
SyntenyMS022344
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135750.1 homeobox-DDT domain protein RLT2 isoform X1 [Momordica charantia]1.0e-41100Show/hide
Query:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
        LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
Subjt:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
XP_022135752.1 homeobox-DDT domain protein RLT2 isoform X2 [Momordica charantia]1.0e-41100Show/hide
Query:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
        LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
Subjt:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
XP_022135753.1 homeobox-DDT domain protein RLT2 isoform X3 [Momordica charantia]1.0e-41100Show/hide
Query:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
        LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
Subjt:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
XP_022135754.1 homeobox-DDT domain protein RLT2 isoform X4 [Momordica charantia]1.0e-41100Show/hide
Query:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
        LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
Subjt:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
XP_022135757.1 homeobox-DDT domain protein RLT2 isoform X6 [Momordica charantia]1.0e-41100Show/hide
Query:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
        LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
Subjt:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
TrEMBL top hitse value%identityAlignment
A0A6J1C1X7 homeobox-DDT domain protein RLT2 isoform X14.8e-42100Show/hide
Query:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
        LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
Subjt:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
A0A6J1C1Y2 homeobox-DDT domain protein RLT2 isoform X54.8e-42100Show/hide
Query:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
        LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
Subjt:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
A0A6J1C2D2 homeobox-DDT domain protein RLT2 isoform X44.8e-42100Show/hide
Query:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
        LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
Subjt:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
A0A6J1C3M8 homeobox-DDT domain protein RLT2 isoform X24.8e-42100Show/hide
Query:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
        LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
Subjt:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
A0A6J1C3N3 homeobox-DDT domain protein RLT2 isoform X64.8e-42100Show/hide
Query:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
        LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
Subjt:  LEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGAACAAATTGACGGAAGTCCCAGCAGTTCTGATAGATTGCTTTCCATTGATGACAATGGTGGAGTTGAATATGATGATATGCTGGTAGATGTCTGTGCTCGTTC
CCGGCGATCTGGCTACGTACTGGCTAGTAGAAGTTATGATATGGATGAAGACAAAGAGGATGATCTCTATGATGATGGAGAGAGGGGCAATGTCATGGATGGAGGAGATC
TTTATGTTGAACAGTATATAAATGGGGAGTACAATGAAGAAAGTAACAAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAGAACAAATTGACGGAAGTCCCAGCAGTTCTGATAGATTGCTTTCCATTGATGACAATGGTGGAGTTGAATATGATGATATGCTGGTAGATGTCTGTGCTCGTTC
CCGGCGATCTGGCTACGTACTGGCTAGTAGAAGTTATGATATGGATGAAGACAAAGAGGATGATCTCTATGATGATGGAGAGAGGGGCAATGTCATGGATGGAGGAGATC
TTTATGTTGAACAGTATATAAATGGGGAGTACAATGAAGAAAGTAACAAG
Protein sequenceShow/hide protein sequence
MLEQIDGSPSSSDRLLSIDDNGGVEYDDMLVDVCARSRRSGYVLASRSYDMDEDKEDDLYDDGERGNVMDGGDLYVEQYINGEYNEESNK