; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022354 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022354
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionOptic atrophy 3 protein (OPA3)
Genome locationscaffold47:2752189..2754336
RNA-Seq ExpressionMS022354
SyntenyMS022354
Gene Ontology termsGO:0019216 - regulation of lipid metabolic process (biological process)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR010754 - Optic atrophy 3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572274.1 hypothetical protein SDJN03_29002, partial [Cucurbita argyrosperma subsp. sororia]2.2e-7489.88Show/hide
Query:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
        MILPFVKLG LALKT CKPIA RLKK+AGLHPKFRQ IINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
Subjt:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR

Query:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKH
        +SRSEARKEELRRQELEAMKQRDDD+AREIEI KQK+EELE+LS GR +T +FH RHPHTSEAEK KH
Subjt:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKH

KAG7036556.1 hypothetical protein SDJN02_00175 [Cucurbita argyrosperma subsp. argyrosperma]3.7e-7488.76Show/hide
Query:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
        MILPFVKLG LALKT CKPIA RLKK+AGLHPKFRQ IINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
Subjt:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR

Query:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKHT
        +SRSEARKEELRRQELEAMKQRDDD+AREIEI KQK+EELE+LS GR +T +FH RHPHTSEAE+ KH+
Subjt:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKHT

XP_022136001.1 OPA3-like protein [Momordica charantia]2.2e-8298.22Show/hide
Query:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
        MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIIN+AQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
Subjt:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR

Query:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKHT
        SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLS GRGVTSIFH RHPHTSEAEKAKHT
Subjt:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKHT

XP_022952344.1 OPA3-like protein [Cucurbita moschata]4.9e-7489.88Show/hide
Query:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
        MILPFVKLG LALKT CKPIA RLKK+AGLHPKFRQ IINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
Subjt:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR

Query:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKH
        +SRSEARKE+LRRQELEAMKQRDDD+AREIEILKQK+EELE+LS GRG+T +FH RH HTSEAEK KH
Subjt:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKH

XP_023554627.1 optic atrophy 3 protein homolog [Cucurbita pepo subsp. pepo]9.8e-7589.35Show/hide
Query:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
        MILPFVKLG LALKT CKPIA RLKK+AGLHPKFRQ IINIAQANHRFSTNVQRRIYG ATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
Subjt:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR

Query:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKHT
        +SRSEARKEELRRQELEAMKQRDDD+AREIEILKQK+EELE+LS GRG+T +FH RHPHTSEAE+ KH+
Subjt:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKHT

TrEMBL top hitse value%identityAlignment
A0A0A0K203 Uncharacterized protein5.8e-7386.39Show/hide
Query:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
        MILP VKLG LALKT CKPIA RLKK+AGLHPKFRQCIIN AQANHRFSTNVQRRIYG ATD AIRPLNEEKAVQAAADLLGELFVFTVAG A+IFEVQR
Subjt:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR

Query:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKHT
        SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQK+E LE+LS GRG+T +FH RHPHT+E E  KH+
Subjt:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKHT

A0A1S3C296 OPA3-like protein8.4e-7286.39Show/hide
Query:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
        MILP VKLG LALKT CKPIA RLKK+AGLHPKFRQCIINIAQANHRFSTNVQRRIYG AT+ AI PLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
Subjt:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR

Query:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKHT
        SSRSEARKEELRRQELEAMKQRDD IAREIEILKQK+E LE+LS GRG+T +FH RHPHT+E E  KH+
Subjt:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKHT

A0A6J1C2A4 OPA3-like protein1.1e-8298.22Show/hide
Query:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
        MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIIN+AQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
Subjt:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR

Query:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKHT
        SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLS GRGVTSIFH RHPHTSEAEKAKHT
Subjt:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKHT

A0A6J1GLF1 OPA3-like protein2.4e-7489.88Show/hide
Query:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
        MILPFVKLG LALKT CKPIA RLKK+AGLHPKFRQ IINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
Subjt:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR

Query:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKH
        +SRSEARKE+LRRQELEAMKQRDDD+AREIEILKQK+EELE+LS GRG+T +FH RH HTSEAEK KH
Subjt:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKH

A0A6J1HVW8 OPA3-like protein5.3e-7489.29Show/hide
Query:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
        MILPFVKLG LALKT CKPIA RLKK+AGLHPKFRQ IINIAQANHRFSTNVQRRIYGRATD AIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
Subjt:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR

Query:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKH
        +SRSEARKEELRRQELEAMKQRDDD+AREIEILKQK+EELE+LS GRG+T +FH RHPH SEA K KH
Subjt:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKH

SwissProt top hitse value%identityAlignment
Q05B66 Optic atrophy 3 protein homolog3.7e-0832.35Show/hide
Query:  PFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCI-INIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRSS
        P  KL  L ++   KP+A R+K+ A     F+  I +  AQ  H      + R+ G   +  I+PLNEE A +  A+LLGE  +F VA   ++ E  R  
Subjt:  PFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCI-INIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRSS

Query:  RSEARKEELRRQELEAMKQRDDDIAREIEILKQKVE
          + RKE  +    +AM+   D +A  +E L+ +V+
Subjt:  RSEARKEELRRQELEAMKQRDDDIAREIEILKQKVE

Q1L9A2 Optic atrophy 3 protein homolog4.0e-1031.21Show/hide
Query:  PFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCI-INIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRSS
        P  KL  L ++   KP+A R+K  A     F+  I +  AQA H      + RI G    + I+PLNE+ A +  A+LLGE  +F + G  ++ E  R +
Subjt:  PFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCI-INIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRSS

Query:  RSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQL
         +  RKEE   Q + +++ +  ++A   E L  ++ E+ +L
Subjt:  RSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQL

Q505D7 Optic atrophy 3 protein homolog1.3e-0833.33Show/hide
Query:  PFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINI--AQANHRFSTNVQRRIYG-RATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
        P  KL  L ++   KP+A R+ KDA    +F +  I +  AQ  H      + RI G R T   I+PLNEE A +  A+LLGE  +F V G  ++ E  R
Subjt:  PFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINI--AQANHRFSTNVQRRIYG-RATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR

Query:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLS
            +  KEE +R    A++     +A  +E L+ + + +  LS
Subjt:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLS

Q9H6K4 Optic atrophy 3 protein2.2e-0833.33Show/hide
Query:  PFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCI-INIAQANHRFSTNVQRRIYG-RATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRS
        P  KL  L ++   KP+A R+K+ A     F+  I +  AQ  H      + RI G R T   I+PLNEE A +  A+LLGE  +F V G  ++ E  R 
Subjt:  PFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCI-INIAQANHRFSTNVQRRIYG-RATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRS

Query:  SRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVE------ELEQLST
           +  KEE +R    A++     +A  +E L+ +V+       LE+L T
Subjt:  SRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVE------ELEQLST

Q9P7W0 OPA3-like protein2.2e-1340.74Show/hide
Query:  VKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFS---TNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRSS
        +K+G+L ++T  KPIA  +K  A  H  FR+  I  AQ  HR     T + R   G A +  +RPLN+ KAV A A  L E F+FTVAG A++FE  R+ 
Subjt:  VKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFS---TNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRSS

Query:  RSEARKEELRRQEL-EAMKQRDDDIAREIEILKQK
            RKE+ RR E+ EA+     +I R  EI++++
Subjt:  RSEARKEELRRQEL-EAMKQRDDDIAREIEILKQK

Arabidopsis top hitse value%identityAlignment
AT1G28510.1 Optic atrophy 3 protein (OPA3)8.9e-5060.84Show/hide
Query:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
        M+LP +KLGTLA+KT  KP+A +LK  A +HPKFRQ IIN AQ NHR +T +QRRIYG ATD  IRPL+EEKAVQAA DL+GE+F+F V GA V+FEVQR
Subjt:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR

Query:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLR-HPHTSEAEK
        SSRSEARKEE R+QELE ++ +D+++ +++  LK K+EELEQL+  RG++ IF L+  P T+ + K
Subjt:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLR-HPHTSEAEK

AT3G58150.1 Optic atrophy 3 protein (OPA3)1.0e-4567.65Show/hide
Query:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR
        M+LP +KLGTLAL+T CKPIA +LKK+AG++PKFRQ IINIAQANHRF+T +QRR  GR TDA IRPLNEE+AVQAAADLLGELF FTVAGAA+++EVQR
Subjt:  MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQR

Query:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQK
        ++R EA+KEE R+QEL   +++ + +  EIE +KQ+
Subjt:  SSRSEARKEELRRQELEAMKQRDDDIAREIEILKQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACTCCCTTTTGTGAAGTTAGGGACTCTCGCTCTGAAAACCTTTTGCAAACCCATCGCCCGTCGTCTCAAGAAGGACGCCGGATTGCACCCCAAGTTTAGGCAGTG
TATTATCAACATCGCGCAGGCAAACCACCGGTTTTCCACGAATGTGCAACGAAGAATTTATGGTCGTGCAACAGATGCTGCCATACGACCCCTGAATGAAGAGAAGGCTG
TCCAAGCTGCAGCAGATCTTCTCGGAGAGCTTTTTGTATTCACAGTTGCCGGAGCTGCTGTTATTTTTGAGGTGCAAAGAAGTTCTAGATCAGAAGCAAGAAAGGAGGAG
CTCCGTAGGCAAGAACTCGAGGCAATGAAACAAAGAGATGACGATATAGCTCGAGAAATAGAAATTCTGAAACAGAAAGTGGAGGAGCTGGAACAATTGTCGACGGGACG
AGGGGTAACCAGCATCTTTCACTTAAGGCATCCACATACCTCTGAAGCTGAAAAGGCGAAACATACT
mRNA sequenceShow/hide mRNA sequence
ATGATACTCCCTTTTGTGAAGTTAGGGACTCTCGCTCTGAAAACCTTTTGCAAACCCATCGCCCGTCGTCTCAAGAAGGACGCCGGATTGCACCCCAAGTTTAGGCAGTG
TATTATCAACATCGCGCAGGCAAACCACCGGTTTTCCACGAATGTGCAACGAAGAATTTATGGTCGTGCAACAGATGCTGCCATACGACCCCTGAATGAAGAGAAGGCTG
TCCAAGCTGCAGCAGATCTTCTCGGAGAGCTTTTTGTATTCACAGTTGCCGGAGCTGCTGTTATTTTTGAGGTGCAAAGAAGTTCTAGATCAGAAGCAAGAAAGGAGGAG
CTCCGTAGGCAAGAACTCGAGGCAATGAAACAAAGAGATGACGATATAGCTCGAGAAATAGAAATTCTGAAACAGAAAGTGGAGGAGCTGGAACAATTGTCGACGGGACG
AGGGGTAACCAGCATCTTTCACTTAAGGCATCCACATACCTCTGAAGCTGAAAAGGCGAAACATACT
Protein sequenceShow/hide protein sequence
MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINIAQANHRFSTNVQRRIYGRATDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRSSRSEARKEE
LRRQELEAMKQRDDDIAREIEILKQKVEELEQLSTGRGVTSIFHLRHPHTSEAEKAKHT