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MS022366 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022366
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionClavata3/ESR (CLE) gene family member MtCLE23
Genome locationscaffold47:2816220..2816426
RNA-Seq ExpressionMS022366
SyntenyMS022366
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABK94087.1 unknown [Populus trichocarpa]6.3e-0451.32Show/hide
Query:  MTQFHLRLLLAILLLLSPTTTAA-AARSRF--PMRKQVAFRPSSPSSATKFV----DFEEQKRRVPTGSNPLHNRR
        M  FHL LLLA+L+  S T  ++ AAR  F  P   Q  FR  SP  A+ F     +FE QKR+VPTGSNPLHN+R
Subjt:  MTQFHLRLLLAILLLLSPTTTAA-AARSRF--PMRKQVAFRPSSPSSATKFV----DFEEQKRRVPTGSNPLHNRR

AES71628.1 Clavata3/ESR (CLE) gene family member MtCLE23 [Medicago truncatula]1.3e-0447.14Show/hide
Query:  MTQFHLRLLLAILLLLSPTTTAAAARSRFPMRKQVAF-RPSSPSSATKFVDFEEQKRRVPTGSNPLHNRR
        M QFHL LL  ILL L+PT+     +   P  +Q AF R ++   +++  +FE QKRRVPTG+NPLHN++
Subjt:  MTQFHLRLLLAILLLLSPTTTAAAARSRFPMRKQVAF-RPSSPSSATKFVDFEEQKRRVPTGSNPLHNRR

KAG6572280.1 hypothetical protein SDJN03_29008, partial [Cucurbita argyrosperma subsp. sororia]5.2e-1469.86Show/hide
Query:  MTQFHLRLLLAILLLLSPTTTA----AAARSRFPMRKQVAFRPSSPSSATKFVDFEEQKRRVPTGSNPLHNRR
        MT FHL L+LAI LLL+PTTTA    AAA+ R  MRKQV FRP SP S  KF ++EEQKRRVPTGSNPLHN+R
Subjt:  MTQFHLRLLLAILLLLSPTTTA----AAARSRFPMRKQVAFRPSSPSSATKFVDFEEQKRRVPTGSNPLHNRR

KAG6589151.1 hypothetical protein SDJN03_17716, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0869.23Show/hide
Query:  MTQFHLRLLLAI-LLLLSPTTTA----AAARSRFPMRKQVAFRPSSPSSATKFVDFEEQKRRVPT
        MT FHLRLLL I LLLL+PTT A    AA R R  +RKQV FRPSSPS+ TK +DFE+QKRRVPT
Subjt:  MTQFHLRLLLAI-LLLLSPTTTA----AAARSRFPMRKQVAFRPSSPSSATKFVDFEEQKRRVPT

TrEMBL top hitse value%identityAlignment
A0A540KYI9 Uncharacterized protein5.2e-0448.68Show/hide
Query:  MTQFHLRLLLAILLLLSPTTTAAAARSRFP----MRKQVAFRP---SSPSSATKFVDFEEQKRRVPTGSNPLHNRR
        M +F + LL A+L+LL    T A  RS FP     R Q  FRP   S+PS+  +  DF  ++RRVPTGSNPLHN+R
Subjt:  MTQFHLRLLLAILLLLSPTTTAAAARSRFP----MRKQVAFRP---SSPSSATKFVDFEEQKRRVPTGSNPLHNRR

A0A6J5UFG2 Uncharacterized protein5.2e-0446.58Show/hide
Query:  MTQFHLRLLLAILLLLSPTTTAA---AARSRFPMRKQVAFRPSSPSSATKFVD-FEEQKRRVPTGSNPLHNRR
        M +F L LL  +LL  +PT   A   +  S  P R Q  FRPS  + +T+    F+ +KRRVPTGSNPLHN+R
Subjt:  MTQFHLRLLLAILLLLSPTTTAA---AARSRFPMRKQVAFRPSSPSSATKFVD-FEEQKRRVPTGSNPLHNRR

A9PCI4 Uncharacterized protein3.1e-0451.32Show/hide
Query:  MTQFHLRLLLAILLLLSPTTTAA-AARSRF--PMRKQVAFRPSSPSSATKFV----DFEEQKRRVPTGSNPLHNRR
        M  FHL LLLA+L+  S T  ++ AAR  F  P   Q  FR  SP  A+ F     +FE QKR+VPTGSNPLHN+R
Subjt:  MTQFHLRLLLAILLLLSPTTTAA-AARSRF--PMRKQVAFRPSSPSSATKFV----DFEEQKRRVPTGSNPLHNRR

G7J6P6 Clavata3/ESR (CLE) gene family member MtCLE236.2e-0547.14Show/hide
Query:  MTQFHLRLLLAILLLLSPTTTAAAARSRFPMRKQVAF-RPSSPSSATKFVDFEEQKRRVPTGSNPLHNRR
        M QFHL LL  ILL L+PT+     +   P  +Q AF R ++   +++  +FE QKRRVPTG+NPLHN++
Subjt:  MTQFHLRLLLAILLLLSPTTTAAAARSRFPMRKQVAF-RPSSPSSATKFVDFEEQKRRVPTGSNPLHNRR

M5X909 Uncharacterized protein8.9e-0447.3Show/hide
Query:  MTQFHLRLLLAILLLLSPTTTAAAARSRFP----MRKQVAFRPSSPSSATKFVD-FEEQKRRVPTGSNPLHNRR
        M +F L LL  +LL  +PT    A R+ FP     R Q  FRPS  + +T+    F  +KRRVPTGSNPLHN+R
Subjt:  MTQFHLRLLLAILLLLSPTTTAAAARSRFP----MRKQVAFRPSSPSSATKFVD-FEEQKRRVPTGSNPLHNRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCAATTCCACCTCCGCCTTCTTCTCGCCATTCTTCTTCTTCTCTCTCCGACCACCACCGCCGCCGCCGCCCGGTCAAGATTTCCGATGAGAAAGCAAGTGGCTTT
CCGGCCATCTTCTCCGTCGTCAGCAACCAAATTCGTCGACTTCGAAGAACAGAAGCGAAGAGTCCCCACAGGATCAAACCCTCTACACAACAGACGG
mRNA sequenceShow/hide mRNA sequence
ATGACTCAATTCCACCTCCGCCTTCTTCTCGCCATTCTTCTTCTTCTCTCTCCGACCACCACCGCCGCCGCCGCCCGGTCAAGATTTCCGATGAGAAAGCAAGTGGCTTT
CCGGCCATCTTCTCCGTCGTCAGCAACCAAATTCGTCGACTTCGAAGAACAGAAGCGAAGAGTCCCCACAGGATCAAACCCTCTACACAACAGACGG
Protein sequenceShow/hide protein sequence
MTQFHLRLLLAILLLLSPTTTAAAARSRFPMRKQVAFRPSSPSSATKFVDFEEQKRRVPTGSNPLHNRR