; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022368 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022368
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRNase III domain-containing protein
Genome locationscaffold47:2829907..2832588
RNA-Seq ExpressionMS022368
SyntenyMS022368
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0030422 - production of siRNA involved in RNA interference (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR000999 - Ribonuclease III domain
IPR014720 - Double-stranded RNA-binding domain
IPR036389 - Ribonuclease III, endonuclease domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572281.1 Endoribonuclease Dicer-like 2, partial [Cucurbita argyrosperma subsp. sororia]1.9e-11485.6Show/hide
Query:  SLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDL
        SL+ +EAIL YEFRDKRLLEEAFTD+SYSPENC SFERLEYVGDSVLNFLITREQYFSNP+LSPG+LTRLRAANVDTEKLARVAITHGFHRYLRHNK+DL
Subjt:  SLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDL

Query:  DKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKEVQVF
        D+KIEEF++ ++EYPLHSNGLIKAPKILADIVES IGAVFTDSNSIDTVWTIF+GLMEPLITLKT+KRHPMTELTE+CQKRNLK EFVD WE+ KE+ V 
Subjt:  DKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKEVQVF

Query:  IDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM
        IDKQLVGKGSY KKLIAQNRAAKDAL+N  T+L   N+PCQPM
Subjt:  IDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM

XP_022136054.1 ribonuclease 3-like protein 3 [Momordica charantia]7.3e-13599.19Show/hide
Query:  SESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH
        SESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH
Subjt:  SESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH

Query:  NKSDLDKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTK
        NKSDLDKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNS+DTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTK
Subjt:  NKSDLDKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTK

Query:  EVQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM
        EVQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLV INQPCQPM
Subjt:  EVQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM

XP_022969213.1 ribonuclease 3-like protein 3 [Cucurbita maxima]1.4e-11485.6Show/hide
Query:  SLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDL
        SL+ +EAIL YEFRDKRLLEEAFTD+SYSPENC SFERLEYVGDSVLNFLITREQYFSNP+LSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK+DL
Subjt:  SLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDL

Query:  DKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKEVQVF
        D+KIEEF++ ++EYPLHSNG+IKAPKILADIVES IGAVFTDSNSIDTVWTIF+GLMEPLITLKT+KRHPMTELTE+CQKRNLK EFVD WE+ KE+ V 
Subjt:  DKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKEVQVF

Query:  IDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM
        IDKQLVGKGSY KKLIAQNRAAKDAL+N  T+L   N+PCQPM
Subjt:  IDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM

XP_023554575.1 ribonuclease 3-like protein 3 [Cucurbita pepo subsp. pepo]8.4e-11586.01Show/hide
Query:  SLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDL
        SL+ +EAIL YEFRDKRLLEEAFTD+SYSPENC SFERLEYVGDSVLNFLITREQYFSNP+LSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK+DL
Subjt:  SLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDL

Query:  DKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKEVQVF
        D+KIEEF++ ++EYPLHSNGLIKAPKILADIVES IGAVFTDSNSIDTVWTIF+GLMEPLITLKT+KRHPMTELTE+CQKRNLK EFVD WE+ KE+ V 
Subjt:  DKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKEVQVF

Query:  IDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM
        IDKQLVGKGSY KKLIAQNRAAKDAL+N  T+L   N+PCQPM
Subjt:  IDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM

XP_038888348.1 ribonuclease 3-like protein 3 [Benincasa hispida]2.9e-11585.02Show/hide
Query:  ESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN
        +S  SL+ +EAIL YEFRDKRLLEEAFTD+SYSPENC SFERLEYVGDSVLNFLITREQYFSNP+LSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN
Subjt:  ESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN

Query:  KSDLDKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKE
        K DL  KIEEF + +++YPLHSNG+IKAPK+LADIVESTIGAVF DSNSI+TVW IF+ LMEPLITLKT+K+HPMTELTEICQKRNL LEFVD WE+ KE
Subjt:  KSDLDKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKE

Query:  VQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM
        VQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNLD +L   NQPCQPM
Subjt:  VQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM

TrEMBL top hitse value%identityAlignment
A0A0A0K1J8 RNase III domain-containing protein5.8e-11482.66Show/hide
Query:  SESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH
        S+SP SL+ +EAIL YEFRDKRLLEEAFTD+SYSPENC SFERLEYVGDSVLNFLITREQYFSNP+LSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH
Subjt:  SESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH

Query:  NKSDLDKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTK
        NK+DL +KIEEF   ++EYPLHSNG+IKAPK+LADIVESTIGAVF DSN IDTVW IF+ LMEPLITLKT+K+HPMTELTE+CQKR+LKLEF D WE+TK
Subjt:  NKSDLDKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTK

Query:  EVQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM
        E++V I+KQ+VGKGSYRKKLIAQNRAAK+AL NLDT     NQPCQPM
Subjt:  EVQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM

A0A1Q3BNT8 Ribonuclease_3 domain-containing protein (Fragment)9.4e-8065.53Show/hide
Query:  LEEVEAILGYEFRDKRLLEEAFTDSSY-SPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDL
        LE VE ILGY+F +K LLEEAFT +SY SP+ C S+ERLE+VGDSVLN L T+EQYF  P+L PG LTRLRAANVDTEKLARV+I HG HRYL H K  L
Subjt:  LEEVEAILGYEFRDKRLLEEAFTDSSY-SPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDL

Query:  DKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSN-SIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKEVQV
        +++I+EF + + +YPLHSNGL+  PK+LADIVESTIGAVF DSN SID VW +F+GL+EP+I+++T+KRHP+TEL E+CQK+NLK++FVD W+++   +V
Subjt:  DKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSN-SIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKEVQV

Query:  FIDKQLVGKGSY-RKKLIAQNRAAKDALNNLDTLL
        FID QLVG+ +Y  KK IA NRAAKDALNN+  +L
Subjt:  FIDKQLVGKGSY-RKKLIAQNRAAKDALNNLDTLL

A0A6J1C375 ribonuclease 3-like protein 33.5e-13599.19Show/hide
Query:  SESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH
        SESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH
Subjt:  SESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH

Query:  NKSDLDKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTK
        NKSDLDKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNS+DTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTK
Subjt:  NKSDLDKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTK

Query:  EVQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM
        EVQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLV INQPCQPM
Subjt:  EVQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM

A0A6J1GKQ4 ribonuclease 3-like protein 31.5e-11485.6Show/hide
Query:  SLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDL
        SL+ +EAIL YEFRDKRLLEEAFTD+SYSPENC SFERLEYVGDSVLNFLITREQYFSNP+LSPG+LTRLRAANVDTEKLARVAITHGFHRYLRHNK+DL
Subjt:  SLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDL

Query:  DKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKEVQVF
        D+KIEEF++ ++EYPLHSNGLIKAPKILADIVES IGAVFTDSNSIDTVWTIF+GLMEPLITLKT+KRHPMTELTE+CQKRNLK EFVD WE+ KE+ V 
Subjt:  DKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKEVQVF

Query:  IDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM
        IDKQLVGKGSY KKLIAQNRAAKDAL+N  T+L   N+PCQPM
Subjt:  IDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM

A0A6J1I0C1 ribonuclease 3-like protein 36.9e-11585.6Show/hide
Query:  SLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDL
        SL+ +EAIL YEFRDKRLLEEAFTD+SYSPENC SFERLEYVGDSVLNFLITREQYFSNP+LSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK+DL
Subjt:  SLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDL

Query:  DKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKEVQVF
        D+KIEEF++ ++EYPLHSNG+IKAPKILADIVES IGAVFTDSNSIDTVWTIF+GLMEPLITLKT+KRHPMTELTE+CQKRNLK EFVD WE+ KE+ V 
Subjt:  DKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKEVQVF

Query:  IDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM
        IDKQLVGKGSY KKLIAQNRAAKDAL+N  T+L   N+PCQPM
Subjt:  IDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVHINQPCQPM

SwissProt top hitse value%identityAlignment
Q69KJ0 Ribonuclease 3-like protein 31.6e-6050.83Show/hide
Query:  PPSLEEVEAILGYEFRDKRLLEEAFTDSS--YSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN
        P  +  VE++LGYEFRDK L+EEA T  S  Y      ++ERLEY+GD+VL  +++RE + +   L PG LTRLRAANVD EKLARVA+ HG H +LRH 
Subjt:  PPSLEEVEAILGYEFRDKRLLEEAFTDSS--YSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHN

Query:  KSDLDKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSN-SIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFV-DSWEKT
          +LD +I +F E +  YP+HSNGL+  PK+L D+VES IGA++ DSN + + VW +F+ L +PLI+L+T+ +HP++EL E CQK    ++ V D W+K 
Subjt:  KSDLDKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSN-SIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFV-DSWEKT

Query:  KEVQVFIDKQLVGKGSY-RKKLIAQNRAAKDALNNLDTLL
          V+V ID ++VG+ +Y +KK IAQNRAAK AL+ L   L
Subjt:  KEVQVFIDKQLVGKGSY-RKKLIAQNRAAKDALNNLDTLL

Q6ATG6 Ribonuclease 3-like protein 26.1e-4443.4Show/hide
Query:  VEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDLDKKI
        VE +L Y+FRD RLLEEA T  S++ ++  S++RLE+VGDS L    +   Y +NP+L PG L+ LRAAN+ TEKLARVA+ H  +  LR N   LD  +
Subjt:  VEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDLDKKI

Query:  EEFAEGMKEYP-------LHSNGLIKAPKILADIVESTIGAVFTDSN-SIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEK--T
         +F E +K+ P        +   ++KAPK+LADIVE+   AV+ D    ++ +W + R L EP+IT +TI   P+T L E+CQK     +F  +W+K   
Subjt:  EEFAEGMKEYP-------LHSNGLIKAPKILADIVESTIGAVFTDSN-SIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEK--T

Query:  KEVQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNL
          V VF+  +LVG GS  +K+IA+  AA+DA   L
Subjt:  KEVQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNL

Q8LMR2 Endoribonuclease Dicer homolog 19.2e-4041.88Show/hide
Query:  SLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDL
        + + ++ +LG EF++K LL EA T +S        ++RLE+VGD+VL+ LITR  +F+   L PG LT LRAA V+ E  ARVA+ H  H +LRH  S L
Subjt:  SLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDL

Query:  DKKIEEFAEGMKEYPL----HSNGL--IKAPKILADIVESTIGAVFTDSN-SIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWE-
        + +I EF + ++E  L    +S GL   KAPK+L DIVES  GA+F DS      VW +F+ L+ P++T +T+  HP+ EL E CQ++   LE+  S   
Subjt:  DKKIEEFAEGMKEYPL----HSNGL--IKAPKILADIVESTIGAVFTDSN-SIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWE-

Query:  KTKEVQVFIDKQLVGKGSYRKKLIAQNRAAKDAL
            V+VF+D   +G     +K +AQ  AA++AL
Subjt:  KTKEVQVFIDKQLVGKGSYRKKLIAQNRAAKDAL

Q9LTQ0 Ribonuclease 3-like protein 21.2e-4240.5Show/hide
Query:  SESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH
        S    S+E VE IL Y+F +K LL+EA T +S +  +  S+ERLE++GDS +   I+   Y + PSL P  L+ LRAANV TEKLARV++ HG + +LR 
Subjt:  SESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH

Query:  NKSDLDKKIEEFAEGM---KEYPLHSNGLIKAPKILADIVESTIGAVFTDSN-SIDTVWTIFRGLMEPLITLKTIKR--HPMTELTEICQKRNLKLEFVD
        N   LD+K++EF+E +    +  +   GL+KAPK+LAD+ ES  GAV+ D N  +  +W IFRGL+EP++TL  +++   P++ L ++C K   +++ + 
Subjt:  NKSDLDKKIEEFAEGM---KEYPLHSNGLIKAPKILADIVESTIGAVFTDSN-SIDTVWTIFRGLMEPLITLKTIKR--HPMTELTEICQKRNLKLEFVD

Query:  SWE--KTKEVQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNL
        +W+        +++D +L+  G    K IA+  AAK+AL  L
Subjt:  SWE--KTKEVQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNL

Q9SP32 Endoribonuclease Dicer homolog 11.7e-4144.64Show/hide
Query:  VEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDLDKKI
        +E  L YEF++K LL EA T +S        ++RLE+VGD+VL+ LITR  +F+  SL PG LT LRAA V+ E  ARVA+ H  H YLRH  S L+K+I
Subjt:  VEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDLDKKI

Query:  EEFAEGMKEYPLHSN---------GLIKAPKILADIVESTIGAVFTDSNSIDT-VWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWE-K
         EF   +KE    S+         G  KAPK+L DIVES  GA+F DS    T  W +F+ L++P++T +T+  HP+ EL E CQ++   LE+  S    
Subjt:  EEFAEGMKEYPLHSN---------GLIKAPKILADIVESTIGAVFTDSNSIDT-VWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWE-K

Query:  TKEVQVFIDKQLVGKGSYRKKLIAQNRAAKDAL
        T  V+VFID   VG     +K +AQ  AA++AL
Subjt:  TKEVQVFIDKQLVGKGSYRKKLIAQNRAAKDAL

Arabidopsis top hitse value%identityAlignment
AT1G01040.1 dicer-like 11.2e-4244.64Show/hide
Query:  VEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDLDKKI
        +E  L YEF++K LL EA T +S        ++RLE+VGD+VL+ LITR  +F+  SL PG LT LRAA V+ E  ARVA+ H  H YLRH  S L+K+I
Subjt:  VEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDLDKKI

Query:  EEFAEGMKEYPLHSN---------GLIKAPKILADIVESTIGAVFTDSNSIDT-VWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWE-K
         EF   +KE    S+         G  KAPK+L DIVES  GA+F DS    T  W +F+ L++P++T +T+  HP+ EL E CQ++   LE+  S    
Subjt:  EEFAEGMKEYPLHSN---------GLIKAPKILADIVESTIGAVFTDSNSIDT-VWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWE-K

Query:  TKEVQVFIDKQLVGKGSYRKKLIAQNRAAKDAL
        T  V+VFID   VG     +K +AQ  AA++AL
Subjt:  TKEVQVFIDKQLVGKGSYRKKLIAQNRAAKDAL

AT1G01040.2 dicer-like 11.2e-4244.64Show/hide
Query:  VEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDLDKKI
        +E  L YEF++K LL EA T +S        ++RLE+VGD+VL+ LITR  +F+  SL PG LT LRAA V+ E  ARVA+ H  H YLRH  S L+K+I
Subjt:  VEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDLDKKI

Query:  EEFAEGMKEYPLHSN---------GLIKAPKILADIVESTIGAVFTDSNSIDT-VWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWE-K
         EF   +KE    S+         G  KAPK+L DIVES  GA+F DS    T  W +F+ L++P++T +T+  HP+ EL E CQ++   LE+  S    
Subjt:  EEFAEGMKEYPLHSN---------GLIKAPKILADIVESTIGAVFTDSNSIDT-VWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWE-K

Query:  TKEVQVFIDKQLVGKGSYRKKLIAQNRAAKDAL
        T  V+VFID   VG     +K +AQ  AA++AL
Subjt:  TKEVQVFIDKQLVGKGSYRKKLIAQNRAAKDAL

AT3G03300.1 dicer-like 23.6e-3135.59Show/hide
Query:  VEAILGYEFRDKRLLEEAFTDSSY-SPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYL----RHNKSD
        +E++L Y F DK LL EA T  SY  PE    ++RLE++GDSVL++LIT+  Y   P LSPG LT +R+A+V+ E  A VA+    H+++     H    
Subjt:  VEAILGYEFRDKRLLEEAFTDSSY-SPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYL----RHNKSD

Query:  LDKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSN-SIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEK-TKEV
        + + + EF +   +        I  PK+L D++ES  GA+F DS  + + V+   + L+  +IT +T+K HP+ ELTE+CQK   +L     ++  T EV
Subjt:  LDKKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSN-SIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEK-TKEV

Query:  QVFIDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLL
        +   +           K +A+  A K+ LN L   L
Subjt:  QVFIDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLL

AT3G20420.1 RNAse THREE-like protein 28.2e-4440.5Show/hide
Query:  SESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH
        S    S+E VE IL Y+F +K LL+EA T +S +  +  S+ERLE++GDS +   I+   Y + PSL P  L+ LRAANV TEKLARV++ HG + +LR 
Subjt:  SESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH

Query:  NKSDLDKKIEEFAEGM---KEYPLHSNGLIKAPKILADIVESTIGAVFTDSN-SIDTVWTIFRGLMEPLITLKTIKR--HPMTELTEICQKRNLKLEFVD
        N   LD+K++EF+E +    +  +   GL+KAPK+LAD+ ES  GAV+ D N  +  +W IFRGL+EP++TL  +++   P++ L ++C K   +++ + 
Subjt:  NKSDLDKKIEEFAEGM---KEYPLHSNGLIKAPKILADIVESTIGAVFTDSN-SIDTVWTIFRGLMEPLITLKTIKR--HPMTELTEICQKRNLKLEFVD

Query:  SWE--KTKEVQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNL
        +W+        +++D +L+  G    K IA+  AAK+AL  L
Subjt:  SWE--KTKEVQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNL

AT4G15417.1 RNAse II-like 13.6e-6353.95Show/hide
Query:  LEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDLD
        +E +E IL Y+F+DK LL +AFTD+SY  +   S+E LE +GDS+LN  I  +     P  +PG LT+LRA NVDTEKLARVA+ H  + YLRH K  L+
Subjt:  LEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDLD

Query:  KKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKEVQVFI
        ++I EF E M++YPLHSNGL+K PK+LADIVESTIGA+F D NS +TVW + + L+EP+I L  +K HPMTEL E+CQKRNLKL   D+WE+ +     I
Subjt:  KKIEEFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKEVQVFI

Query:  DKQLVGKGSYR-KKLIAQNRAAKDALNN
        + + VG G +  KK  A+N AAK+A++N
Subjt:  DKQLVGKGSYR-KKLIAQNRAAKDALNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTGAGTCGCCGCCGAGTCTGGAGGAAGTGGAGGCGATTCTCGGCTACGAGTTCCGCGATAAGCGGTTGCTCGAAGAGGCTTTCACGGATTCCTCGTATTCGCCGGAAAA
TTGCTTCTCCTTCGAGCGATTGGAGTACGTCGGCGACTCGGTGTTGAATTTCTTGATCACGAGAGAGCAGTACTTCTCGAATCCGAGTTTATCGCCCGGGTCGCTGACTC
GACTCAGAGCTGCGAATGTTGACACGGAAAAACTCGCTCGAGTTGCGATAACGCACGGATTCCATCGGTATCTTCGCCACAACAAATCCGATCTCGACAAGAAAATAGAA
GAGTTTGCAGAAGGGATGAAGGAGTATCCACTACATTCCAATGGACTAATCAAAGCTCCAAAAATTCTAGCGGACATTGTGGAATCAACTATTGGAGCTGTTTTCACCGA
CAGTAACTCTATAGACACAGTTTGGACGATATTTAGAGGTCTAATGGAGCCATTGATAACTTTGAAGACTATAAAAAGACATCCAATGACGGAGTTAACAGAAATTTGCC
AAAAAAGAAATCTGAAGCTTGAATTTGTGGACTCATGGGAGAAAACAAAGGAGGTTCAAGTTTTCATAGACAAACAGCTCGTGGGAAAAGGGAGTTACAGGAAAAAGCTT
ATTGCCCAAAATCGAGCTGCCAAAGATGCTTTGAACAACTTGGACACACTTCTTGTACACATTAATCAACCTTGTCAACCTATG
mRNA sequenceShow/hide mRNA sequence
AGTGAGTCGCCGCCGAGTCTGGAGGAAGTGGAGGCGATTCTCGGCTACGAGTTCCGCGATAAGCGGTTGCTCGAAGAGGCTTTCACGGATTCCTCGTATTCGCCGGAAAA
TTGCTTCTCCTTCGAGCGATTGGAGTACGTCGGCGACTCGGTGTTGAATTTCTTGATCACGAGAGAGCAGTACTTCTCGAATCCGAGTTTATCGCCCGGGTCGCTGACTC
GACTCAGAGCTGCGAATGTTGACACGGAAAAACTCGCTCGAGTTGCGATAACGCACGGATTCCATCGGTATCTTCGCCACAACAAATCCGATCTCGACAAGAAAATAGAA
GAGTTTGCAGAAGGGATGAAGGAGTATCCACTACATTCCAATGGACTAATCAAAGCTCCAAAAATTCTAGCGGACATTGTGGAATCAACTATTGGAGCTGTTTTCACCGA
CAGTAACTCTATAGACACAGTTTGGACGATATTTAGAGGTCTAATGGAGCCATTGATAACTTTGAAGACTATAAAAAGACATCCAATGACGGAGTTAACAGAAATTTGCC
AAAAAAGAAATCTGAAGCTTGAATTTGTGGACTCATGGGAGAAAACAAAGGAGGTTCAAGTTTTCATAGACAAACAGCTCGTGGGAAAAGGGAGTTACAGGAAAAAGCTT
ATTGCCCAAAATCGAGCTGCCAAAGATGCTTTGAACAACTTGGACACACTTCTTGTACACATTAATCAACCTTGTCAACCTATG
Protein sequenceShow/hide protein sequence
SESPPSLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNPSLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDLDKKIE
EFAEGMKEYPLHSNGLIKAPKILADIVESTIGAVFTDSNSIDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQKRNLKLEFVDSWEKTKEVQVFIDKQLVGKGSYRKKL
IAQNRAAKDALNNLDTLLVHINQPCQPM