; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022372 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022372
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCCR4-NOT transcription complex subunit 9-like isoform X1
Genome locationscaffold47:2847507..2850025
RNA-Seq ExpressionMS022372
SyntenyMS022372
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0000932 - P-body (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
InterPro domainsIPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572285.1 CCR4-NOT transcription complex subunit 9, partial [Cucurbita argyrosperma subsp. sororia]1.1e-13975.71Show/hide
Query:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS
        MA LPDSLFGEPS  E + A         ++   P+ DL++VS++KLILAL++ HTRERALQLLSQNRS  D+LAVLIWHSFGTMFTLLKEIME+Y  LS
Subjt:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS

Query:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR
        KPDLTE+AS RVCNALALLQCVA+HPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGL 
Subjt:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR

Query:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR
                         THNL ITQV+TFI+QKILM+EEGLRYCC++ADRFFAIT ALETMMEK++EEPS+RLLKHI+RCYLKLSESPRAC  L +LLPR
Subjt:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR

Query:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG
        MLNDSAF DLL DDP VMSSFQQLLRNVH+ R+R    E++DE G PKTG
Subjt:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG

KAG7011901.1 CCR4-NOT transcription complex subunit 9 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-13975.43Show/hide
Query:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS
        MA LPDSLFGEPS  E + A         ++   P+ DL++VS++KLILAL++ HTRERALQLLSQNRS  D+LAVLIWHSFGTMFTLLKEIME+Y  LS
Subjt:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS

Query:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR
        KPDLTE+AS RVCNALALLQCVA+HPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGL 
Subjt:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR

Query:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR
                         THNL ITQV+TFI+QKILM+EEGLRYCC++ADRFFAIT ALETMMEK++EEPS+RLLKHI+RCYLKLSESPRAC  L +LLPR
Subjt:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR

Query:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG
        MLNDSAF DLL DDP VMSSFQQLLRNVH+ R+R    E++DE G PK+G
Subjt:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG

XP_022136038.1 cell differentiation protein rcd1 isoform X1 [Momordica charantia]8.6e-17492.29Show/hide
Query:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS
        MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS
Subjt:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS

Query:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR
        KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGL 
Subjt:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR

Query:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR
                                 VATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR
Subjt:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR

Query:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG
        MLND AFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG
Subjt:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG

XP_022136039.1 cell differentiation protein rcd1 isoform X2 [Momordica charantia]2.9e-16990.29Show/hide
Query:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS
        MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS
Subjt:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS

Query:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR
        KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGL 
Subjt:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR

Query:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR
                                        KILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR
Subjt:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR

Query:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG
        MLND AFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG
Subjt:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG

XP_038888595.1 cell differentiation protein rcd1 isoform X2 [Benincasa hispida]2.5e-14178Show/hide
Query:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS
        MANLPDSLFGE S+ E + A     +        PH DLS VSV +LILALN  HTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS
Subjt:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS

Query:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR
        KPDLTEKASTRVC+ALALLQCVA+HPETR+PFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGL 
Subjt:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR

Query:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR
                                 VATFIVQKILMNEEGLRYCCIIADRFFAITRALETMME+L+EEPS+RLLKHI+RCYLKLSESPRACL LGRLLPR
Subjt:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR

Query:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG
        MLNDSAF DLL DDP VMSSF+QLLRNVH+ R+R +E     + G PKTG
Subjt:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG

TrEMBL top hitse value%identityAlignment
A0A5D3C9W8 Cell differentiation protein rcd1 isoform X15.0e-13578.08Show/hide
Query:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS
        MANLPDSLFGEP+T  A   ++            PH DL+ V V +LILALN   TRERAL LLSQ RSM DNLAVLIWHSFGTMFTLLKEIM+VYHLLS
Subjt:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS

Query:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR
        KP+LTEKASTRVCNALALLQCVA+HPETRVPFMKA+IPLYLYPFLNTTIKEKPHE LRLT LGVIGALVKV+DKEVIYFLLKTEIVPYCLRCMDVGKG  
Subjt:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR

Query:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR
          L+K S          TH  KI QVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMME L+EEPS+RLLKHI+RCYL LSESPRACL LGRLLPR
Subjt:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR

Query:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRM
        ML+ SAF DLLHDDP VMSSF+QLLR VH+ R+
Subjt:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRM

A0A6J1C359 cell differentiation protein rcd1 isoform X21.4e-16990.29Show/hide
Query:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS
        MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS
Subjt:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS

Query:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR
        KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGL 
Subjt:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR

Query:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR
                                        KILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR
Subjt:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR

Query:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG
        MLND AFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG
Subjt:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG

A0A6J1C6I0 cell differentiation protein rcd1 isoform X14.2e-17492.29Show/hide
Query:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS
        MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS
Subjt:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS

Query:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR
        KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGL 
Subjt:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR

Query:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR
                                 VATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR
Subjt:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR

Query:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG
        MLND AFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG
Subjt:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKTG

A0A6J1GK58 CCR4-NOT transcription complex subunit 9-like isoform X13.2e-13473.64Show/hide
Query:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS
        MA LPDSLFGEPS  E + A         ++   P+ DL++VS++KLILAL++ HTRERALQLLSQNRS  D+LAVLIWHSFGTMFTLLKEIME+Y  LS
Subjt:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS

Query:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR
        KPDLTE+AS RVCNALALLQCVA+HPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGL 
Subjt:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR

Query:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR
                                 V+TFI+QKILM+EEGLRYCC++ADRFFAIT ALETMMEK++EEPS+RLLKHI+RCYLKLSESPRAC  L +LLPR
Subjt:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR

Query:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKT
        MLNDSAF DLL DDP VMSSFQQLLRNVH+ R+R    E++DE G PKT
Subjt:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKT

A0A6J1GLF6 CCR4-NOT transcription complex subunit 9-like isoform X33.2e-13473.64Show/hide
Query:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS
        MA LPDSLFGEPS  E + A         ++   P+ DL++VS++KLILAL++ HTRERALQLLSQNRS  D+LAVLIWHSFGTMFTLLKEIME+Y  LS
Subjt:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS

Query:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR
        KPDLTE+AS RVCNALALLQCVA+HPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGL 
Subjt:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR

Query:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR
                                 V+TFI+QKILM+EEGLRYCC++ADRFFAIT ALETMMEK++EEPS+RLLKHI+RCYLKLSESPRAC  L +LLPR
Subjt:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR

Query:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKT
        MLNDSAF DLL DDP VMSSFQQLLRNVH+ R+R    E++DE G PKT
Subjt:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVHDRRMRKDEDEDKDENGYPKT

SwissProt top hitse value%identityAlignment
A7MB47 CCR4-NOT transcription complex subunit 93.9e-6848.47Show/hide
Query:  LSQVSVDKL---ILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLSKPDLTEKASTRVCNALALLQCVAAHPETRVPFMKA
        L+QV  +K+   I  L+ P TRE AL  LS+ R    +LA ++WHSFGT+  LL+EI+ +Y  ++ P LT   S RVCNALALLQCVA+HPETR  F+ A
Subjt:  LSQVSVDKL---ILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLSKPDLTEKASTRVCNALALLQCVAAHPETRVPFMKA

Query:  KIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLRCFLNKLSTFAHFITRRFTHNLKITQVATFIVQKIL
         IPL+LYPFL+T  K +P EYLRLTSLGVIGALVK D++EVI FLL TEI+P CLR M+ G  L                          VATFI+QKIL
Subjt:  KIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLRCFLNKLSTFAHFITRRFTHNLKITQVATFIVQKIL

Query:  MNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPRMLNDSAFIDLLHDDPAVMSSFQQLLRNVHD
        +++ GL Y C   +RF  +   L  M+ +L++EPS RLLKH++RCYL+LS++PRA   L + LP  L D+ F  +L DD        QL++N+ +
Subjt:  MNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPRMLNDSAFIDLLHDDPAVMSSFQQLLRNVHD

Q4R347 CCR4-NOT transcription complex subunit 93.9e-6848.47Show/hide
Query:  LSQVSVDKL---ILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLSKPDLTEKASTRVCNALALLQCVAAHPETRVPFMKA
        L+QV  +K+   I  L+ P TRE AL  LS+ R    +LA ++WHSFGT+  LL+EI+ +Y  ++ P LT   S RVCNALALLQCVA+HPETR  F+ A
Subjt:  LSQVSVDKL---ILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLSKPDLTEKASTRVCNALALLQCVAAHPETRVPFMKA

Query:  KIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLRCFLNKLSTFAHFITRRFTHNLKITQVATFIVQKIL
         IPL+LYPFL+T  K +P EYLRLTSLGVIGALVK D++EVI FLL TEI+P CLR M+ G  L                          VATFI+QKIL
Subjt:  KIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLRCFLNKLSTFAHFITRRFTHNLKITQVATFIVQKIL

Query:  MNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPRMLNDSAFIDLLHDDPAVMSSFQQLLRNVHD
        +++ GL Y C   +RF  +   L  M+ +L++EPS RLLKH++RCYL+LS++PRA   L + LP  L D+ F  +L DD        QL++N+ +
Subjt:  MNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPRMLNDSAFIDLLHDDPAVMSSFQQLLRNVHD

Q5R6Z6 CCR4-NOT transcription complex subunit 93.9e-6848.47Show/hide
Query:  LSQVSVDKL---ILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLSKPDLTEKASTRVCNALALLQCVAAHPETRVPFMKA
        L+QV  +K+   I  L+ P TRE AL  LS+ R    +LA ++WHSFGT+  LL+EI+ +Y  ++ P LT   S RVCNALALLQCVA+HPETR  F+ A
Subjt:  LSQVSVDKL---ILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLSKPDLTEKASTRVCNALALLQCVAAHPETRVPFMKA

Query:  KIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLRCFLNKLSTFAHFITRRFTHNLKITQVATFIVQKIL
         IPL+LYPFL+T  K +P EYLRLTSLGVIGALVK D++EVI FLL TEI+P CLR M+ G  L                          VATFI+QKIL
Subjt:  KIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLRCFLNKLSTFAHFITRRFTHNLKITQVATFIVQKIL

Query:  MNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPRMLNDSAFIDLLHDDPAVMSSFQQLLRNVHD
        +++ GL Y C   +RF  +   L  M+ +L++EPS RLLKH++RCYL+LS++PRA   L + LP  L D+ F  +L DD        QL++N+ +
Subjt:  MNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPRMLNDSAFIDLLHDDPAVMSSFQQLLRNVHD

Q92600 CCR4-NOT transcription complex subunit 93.9e-6848.47Show/hide
Query:  LSQVSVDKL---ILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLSKPDLTEKASTRVCNALALLQCVAAHPETRVPFMKA
        L+QV  +K+   I  L+ P TRE AL  LS+ R    +LA ++WHSFGT+  LL+EI+ +Y  ++ P LT   S RVCNALALLQCVA+HPETR  F+ A
Subjt:  LSQVSVDKL---ILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLSKPDLTEKASTRVCNALALLQCVAAHPETRVPFMKA

Query:  KIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLRCFLNKLSTFAHFITRRFTHNLKITQVATFIVQKIL
         IPL+LYPFL+T  K +P EYLRLTSLGVIGALVK D++EVI FLL TEI+P CLR M+ G  L                          VATFI+QKIL
Subjt:  KIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLRCFLNKLSTFAHFITRRFTHNLKITQVATFIVQKIL

Query:  MNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPRMLNDSAFIDLLHDDPAVMSSFQQLLRNVHD
        +++ GL Y C   +RF  +   L  M+ +L++EPS RLLKH++RCYL+LS++PRA   L + LP  L D+ F  +L DD        QL++N+ +
Subjt:  MNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPRMLNDSAFIDLLHDDPAVMSSFQQLLRNVHD

Q9JKY0 CCR4-NOT transcription complex subunit 93.9e-6848.47Show/hide
Query:  LSQVSVDKL---ILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLSKPDLTEKASTRVCNALALLQCVAAHPETRVPFMKA
        L+QV  +K+   I  L+ P TRE AL  LS+ R    +LA ++WHSFGT+  LL+EI+ +Y  ++ P LT   S RVCNALALLQCVA+HPETR  F+ A
Subjt:  LSQVSVDKL---ILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLSKPDLTEKASTRVCNALALLQCVAAHPETRVPFMKA

Query:  KIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLRCFLNKLSTFAHFITRRFTHNLKITQVATFIVQKIL
         IPL+LYPFL+T  K +P EYLRLTSLGVIGALVK D++EVI FLL TEI+P CLR M+ G  L                          VATFI+QKIL
Subjt:  KIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLRCFLNKLSTFAHFITRRFTHNLKITQVATFIVQKIL

Query:  MNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPRMLNDSAFIDLLHDDPAVMSSFQQLLRNVHD
        +++ GL Y C   +RF  +   L  M+ +L++EPS RLLKH++RCYL+LS++PRA   L + LP  L D+ F  +L DD        QL++N+ +
Subjt:  MNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPRMLNDSAFIDLLHDDPAVMSSFQQLLRNVHD

Arabidopsis top hitse value%identityAlignment
AT2G32550.1 Cell differentiation, Rcd1-like protein1.7e-3430.81Show/hide
Query:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQV---SVDKLILALNDPH-----TRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEI
        M NLPDSL+ + S ++ +     S + + SS S P   LS V   +V+ +I  + D H       + AL  L+ +R+  + L  L+W S  T++ +L+E+
Subjt:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQV---SVDKLILALNDPH-----TRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEI

Query:  MEVY-HLLSKPDLT----EKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKV-DDKEVIYFLLKTEIV
         E Y HL     L          RV N   L Q +A HP+T   F++AK+P Y YP ++T + +K  E +RL +LGVI  ++K  +D  V  +L+++ +V
Subjt:  MEVY-HLLSKPDLT----EKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKV-DDKEVIYFLLKTEIV

Query:  PYCLRCMDVGKGLRCFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAE--EPSRRLLKHIIRCYLKL
         +C++ ++ G                       + +  +VA +I+ KI+  ++GL YCC++ADRF+ I   L+ ++  L+    P   L   +  CY+KL
Subjt:  PYCLRCMDVGKGLRCFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAE--EPSRRLLKHIIRCYLKL

Query:  SESPRACLRLGRLLPRMLNDSAFIDLLHDDPAVMSSFQQLLRNV
        S++ RA   + R  P +L D  F  L  +DP   ++  QLL+N+
Subjt:  SESPRACLRLGRLLPRMLNDSAFIDLLHDDPAVMSSFQQLLRNV

AT3G20800.1 Cell differentiation, Rcd1-like protein4.1e-8150.15Show/hide
Query:  MANLPDSL-----FGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEV
        MANLP SL     FG PST           +A   + +  + D +  S ++L+L L++P  RE AL  LS+ R +  +LA L+W+SFGT+  LL+EI+ +
Subjt:  MANLPDSL-----FGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEV

Query:  YHLLSKPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDV
        Y +L+ P+LT   S RVCN+LALLQCVA+H +TR+ F+KA IPLYLYPFLNTT K +P EYLRLTSLGVIGALVKVDD EVI FLL TEI+P CLR M++
Subjt:  YHLLSKPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDV

Query:  GKGLRCFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLG
        G  L                          VATFIVQKIL+++ G+ Y C  A+RFFA+ R L  M++ L E+PS RLLKHIIRCYL+LS++PRAC  L 
Subjt:  GKGLRCFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLG

Query:  RLLPRMLNDSAFIDLLHDDPAVMSSFQQLLRNV
          LP  L D +F + L +DP      QQL+ NV
Subjt:  RLLPRMLNDSAFIDLLHDDPAVMSSFQQLLRNV

AT5G12980.1 Cell differentiation, Rcd1-like protein7.0e-8152.28Show/hide
Query:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS
        MANLP      P     S A+SG+++ S SS++    D    S ++LIL L++P  RE AL  LS+ R +  +LA L+WHS GT+  LL+EI+ VY  LS
Subjt:  MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLS

Query:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR
         P +T   S RVCNALALLQCVA+H +TR+ F+KA +PLYLY FLNT+ K +P EYLRLTSLGVIGALVKVDD EVI FLL+TEIVP CLR M+ G  L 
Subjt:  KPDLTEKASTRVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLR

Query:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR
                                 VATFIVQK+L+++ GL Y C  A+RFFA+ R L  M+  LAE PS RLLKHIIRCYL+L+++PRAC  LG  LP 
Subjt:  CFLNKLSTFAHFITRRFTHNLKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPR

Query:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVH
        +L D+ F   L+DDP  M   QQLL NV+
Subjt:  MLNDSAFIDLLHDDPAVMSSFQQLLRNVH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATCTTCCAGATTCCCTATTCGGAGAACCGTCGACAGTGGAAGCAAGCGCCGCCGTCAGCGGAAGCGCCACCGCGTCGGGATCCAGTGACTCTCGTCCTCATGG
AGACCTAAGCCAGGTCTCGGTCGATAAGCTCATTCTCGCTCTCAACGACCCCCACACTCGTGAACGTGCTCTCCAGCTTCTCTCTCAGAATAGGAGCATGTGTGACAATT
TGGCTGTTCTGATATGGCATTCCTTTGGTACTATGTTTACCCTTCTCAAGGAAATAATGGAAGTTTACCATTTGCTGTCTAAGCCTGACCTTACAGAAAAGGCTTCAACT
AGGGTCTGCAATGCTCTTGCTCTTCTTCAGTGTGTGGCTGCTCACCCAGAAACAAGGGTGCCATTTATGAAAGCTAAAATCCCACTCTATTTGTACCCTTTCCTTAATAC
CACCATCAAGGAAAAACCTCATGAATATCTCAGGCTCACTAGCTTAGGAGTAATTGGTGCTCTAGTTAAGGTTGATGACAAGGAAGTTATTTATTTCTTACTCAAAACTG
AGATAGTCCCATACTGCCTGCGGTGCATGGACGTCGGAAAGGGCTTACGTTGCTTTCTCAATAAGTTGAGCACATTTGCACATTTTATTACAAGGCGGTTTACTCATAAT
CTCAAGATCACCCAGGTTGCCACATTTATTGTTCAGAAAATTCTAATGAATGAAGAGGGATTGAGGTACTGCTGCATCATAGCTGATCGGTTTTTCGCAATAACTCGTGC
CTTGGAGACAATGATGGAAAAACTCGCGGAAGAACCCTCACGTCGGCTGCTAAAACATATCATTCGCTGTTATCTTAAGCTATCTGAAAGTCCAAGGGCATGTCTTCGAC
TTGGGAGACTCCTTCCTAGGATGCTAAATGATAGCGCCTTTATCGACCTCCTTCATGACGACCCTGCTGTCATGAGCTCGTTTCAGCAGTTGCTTCGCAATGTACATGAC
CGTAGGATGCGAAAAGACGAAGACGAAGACAAAGACGAAAATGGTTATCCCAAAACAGGC
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATCTTCCAGATTCCCTATTCGGAGAACCGTCGACAGTGGAAGCAAGCGCCGCCGTCAGCGGAAGCGCCACCGCGTCGGGATCCAGTGACTCTCGTCCTCATGG
AGACCTAAGCCAGGTCTCGGTCGATAAGCTCATTCTCGCTCTCAACGACCCCCACACTCGTGAACGTGCTCTCCAGCTTCTCTCTCAGAATAGGAGCATGTGTGACAATT
TGGCTGTTCTGATATGGCATTCCTTTGGTACTATGTTTACCCTTCTCAAGGAAATAATGGAAGTTTACCATTTGCTGTCTAAGCCTGACCTTACAGAAAAGGCTTCAACT
AGGGTCTGCAATGCTCTTGCTCTTCTTCAGTGTGTGGCTGCTCACCCAGAAACAAGGGTGCCATTTATGAAAGCTAAAATCCCACTCTATTTGTACCCTTTCCTTAATAC
CACCATCAAGGAAAAACCTCATGAATATCTCAGGCTCACTAGCTTAGGAGTAATTGGTGCTCTAGTTAAGGTTGATGACAAGGAAGTTATTTATTTCTTACTCAAAACTG
AGATAGTCCCATACTGCCTGCGGTGCATGGACGTCGGAAAGGGCTTACGTTGCTTTCTCAATAAGTTGAGCACATTTGCACATTTTATTACAAGGCGGTTTACTCATAAT
CTCAAGATCACCCAGGTTGCCACATTTATTGTTCAGAAAATTCTAATGAATGAAGAGGGATTGAGGTACTGCTGCATCATAGCTGATCGGTTTTTCGCAATAACTCGTGC
CTTGGAGACAATGATGGAAAAACTCGCGGAAGAACCCTCACGTCGGCTGCTAAAACATATCATTCGCTGTTATCTTAAGCTATCTGAAAGTCCAAGGGCATGTCTTCGAC
TTGGGAGACTCCTTCCTAGGATGCTAAATGATAGCGCCTTTATCGACCTCCTTCATGACGACCCTGCTGTCATGAGCTCGTTTCAGCAGTTGCTTCGCAATGTACATGAC
CGTAGGATGCGAAAAGACGAAGACGAAGACAAAGACGAAAATGGTTATCCCAAAACAGGC
Protein sequenceShow/hide protein sequence
MANLPDSLFGEPSTVEASAAVSGSATASGSSDSRPHGDLSQVSVDKLILALNDPHTRERALQLLSQNRSMCDNLAVLIWHSFGTMFTLLKEIMEVYHLLSKPDLTEKAST
RVCNALALLQCVAAHPETRVPFMKAKIPLYLYPFLNTTIKEKPHEYLRLTSLGVIGALVKVDDKEVIYFLLKTEIVPYCLRCMDVGKGLRCFLNKLSTFAHFITRRFTHN
LKITQVATFIVQKILMNEEGLRYCCIIADRFFAITRALETMMEKLAEEPSRRLLKHIIRCYLKLSESPRACLRLGRLLPRMLNDSAFIDLLHDDPAVMSSFQQLLRNVHD
RRMRKDEDEDKDENGYPKTG