CuGenDBv2

Gene ID	MS022385
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ThiF domain-containing protein
Genome location	scaffold47:2953469..2953843
RNA-Seq Expression	MS022385
Synteny	MS022385
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7022864.1 hypothetical protein SDJN02_16600, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.6e-53

88.1

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Query:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNR-SSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKS
        MNRRSR F RS  S SE+FHKYLKPGALAQIRNSRMIARFNRVNL+SQIYS R SSLSPP+AP+DS LLQVNIVDASPCFAGRVYGP CLQRKKLLAAKS
Subjt:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNR-SSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKS

Query:  LWFLSPSPTNLVPDSPPDPVIEVLGG
        LWFLS SPTNL PDSPPDPVIEVLGG
Subjt:  LWFLSPSPTNLVPDSPPDPVIEVLGG

XP_022135897.1 uncharacterized protein LOC111007734 [Momordica charantia]

3.7e-63

100

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Query:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNRSSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKSL
        MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNRSSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKSL
Subjt:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNRSSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKSL

Query:  WFLSPSPTNLVPDSPPDPVIEVLGG
        WFLSPSPTNLVPDSPPDPVIEVLGG
Subjt:  WFLSPSPTNLVPDSPPDPVIEVLGG

XP_022930695.1 uncharacterized protein LOC111437092 [Cucurbita moschata]

3.5e-53

88.89

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Query:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNR-SSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKS
        MNRRSR F RS  S SE+FHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS R SSLSPP+AP+DS LLQVNIVDASPCFAGRVYGP CLQRKKLLAAKS
Subjt:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNR-SSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKS

Query:  LWFLSPSPTNLVPDSPPDPVIEVLGG
        LWFLS SPTNL PDSPPDPVIEVLGG
Subjt:  LWFLSPSPTNLVPDSPPDPVIEVLGG

XP_022989505.1 uncharacterized protein LOC111486563 [Cucurbita maxima]

5.1e-52

88.1

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Query:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNR-SSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKS
        MNRRSR F RS  S SE+FHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS R SSLSPP+AP+DS LLQVNIVDASPCFAGRVYGP CLQRKKLLAAKS
Subjt:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNR-SSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKS

Query:  LWFLSPSPTNLVPDSPPDPVIEVLGG
        LWFLS S TNL PDSPPDPVIEVLGG
Subjt:  LWFLSPSPTNLVPDSPPDPVIEVLGG

XP_023530330.1 uncharacterized protein LOC111792933 [Cucurbita pepo subsp. pepo]

2.7e-53

88.89

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Query:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNR-SSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKS
        MNRRSR F RS  S SE+FHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS R SSLSPP+AP+DS LLQVNIVDASPCFAGRVYGP CLQRKKLLAAKS
Subjt:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNR-SSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKS

Query:  LWFLSPSPTNLVPDSPPDPVIEVLGG
        LWFLS SPTNL PDSPPDPVIEVLGG
Subjt:  LWFLSPSPTNLVPDSPPDPVIEVLGG

TrEMBL top hits

e value

%identity

Alignment

A0A5D3C9X6 Uncharacterized protein

6.9e-47

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Query:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNRSSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKSL
        MNRRSR   RSGNS+SE+FHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS  SS    S P+DSGLLQVNIVDASP FAGRVYGP  LQRKKLLA+KSL
Subjt:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNRSSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKSL

Query:  WFLSPSPTNLVPDSPPDPVIEVLGG
        WFL+ SPTNL PDSPPDPVIEVLGG
Subjt:  WFLSPSPTNLVPDSPPDPVIEVLGG

A0A6J1C424 uncharacterized protein LOC111007734

1.8e-63

100

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Query:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNRSSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKSL
        MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNRSSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKSL
Subjt:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNRSSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKSL

Query:  WFLSPSPTNLVPDSPPDPVIEVLGG
        WFLSPSPTNLVPDSPPDPVIEVLGG
Subjt:  WFLSPSPTNLVPDSPPDPVIEVLGG

A0A6J1EXJ2 uncharacterized protein LOC111437092

1.7e-53

88.89

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Query:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNR-SSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKS
        MNRRSR F RS  S SE+FHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS R SSLSPP+AP+DS LLQVNIVDASPCFAGRVYGP CLQRKKLLAAKS
Subjt:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNR-SSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKS

Query:  LWFLSPSPTNLVPDSPPDPVIEVLGG
        LWFLS SPTNL PDSPPDPVIEVLGG
Subjt:  LWFLSPSPTNLVPDSPPDPVIEVLGG

A0A6J1GLZ8 uncharacterized protein LOC111455201

9.7e-49

85.83

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Query:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNR-SSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAK-
        MNRRSR   RSGNS SE+FHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS R SSLSP +AP+ SGLLQVNI DASPCFAGRVYGP CLQRKKLLAAK 
Subjt:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNR-SSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAK-

Query:  SLWFLSPSPTNLVPDSPPDPVIEVLGG
        SLWFL+ SPTNL PDSPPDPVI VLGG
Subjt:  SLWFLSPSPTNLVPDSPPDPVIEVLGG

A0A6J1JMJ5 uncharacterized protein LOC111486563

2.5e-52

88.1

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Query:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNR-SSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKS
        MNRRSR F RS  S SE+FHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS R SSLSPP+AP+DS LLQVNIVDASPCFAGRVYGP CLQRKKLLAAKS
Subjt:  MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNR-SSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKS

Query:  LWFLSPSPTNLVPDSPPDPVIEVLGG
        LWFLS S TNL PDSPPDPVIEVLGG
Subjt:  LWFLSPSPTNLVPDSPPDPVIEVLGG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G26960.1 unknown protein

2.5e-09

35.85

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Query:  RSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNRSSLSPPSAPLDSGLL---QVNIVDASPCFAGRVYGPPCLQRKKLLAAKSLWF-LSP
        RS   R++ FH+Y+KPGALAQIRN+R+    +   L   +      + PPS+  +S +    Q   +D  P    ++YGP  + RKKL  A+S    L+P
Subjt:  RSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNRSSLSPPSAPLDSGLL---QVNIVDASPCFAGRVYGPPCLQRKKLLAAKSLWF-LSP

Query:  SPTNLV
        SP +++
Subjt:  SPTNLV

AT5G54970.1 unknown protein

3.5e-11

43.3

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Query:  RSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNRSSLSPPSAPLDSGLLQVN------IVDASPCFAGRVYGPPCLQRKKLLAAKSL
        +S   RS+ FH+YLKPGALAQIRNSR+ AR +  +LVS+  S+ S L  P +P ++ + +         +D  P    ++YGP   QRKKL AA+S+
Subjt:  RSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNRSSLSPPSAPLDSGLLQVN------IVDASPCFAGRVYGPPCLQRKKLLAAKSL

Sequences

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CDS sequence

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ATGAATCGCCGATCCAGAACCTTTCACCGATCCGGCAACTCCCGTTCCGAGTCGTTTCACAAGTATCTAAAACCCGGCGCACTTGCCCAAATTCGGAATTCGCGTATGAT
CGCCAGATTCAATCGAGTCAACTTAGTTTCTCAGATCTACTCCAATCGATCCTCTCTATCGCCGCCCAGTGCGCCGCTGGACTCCGGTCTGCTTCAGGTTAACATTGTCG
ATGCTTCCCCTTGCTTTGCTGGGAGGGTGTACGGTCCCCCCTGTTTGCAGAGGAAGAAACTTCTGGCTGCTAAGTCCTTGTGGTTCCTCAGCCCTAGCCCGACTAATCTG
GTCCCCGATTCACCGCCCGATCCAGTTATTGAAGTGTTAGGGGGT

mRNA sequence

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Protein sequence

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MNRRSRTFHRSGNSRSESFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSNRSSLSPPSAPLDSGLLQVNIVDASPCFAGRVYGPPCLQRKKLLAAKSLWFLSPSPTNL
VPDSPPDPVIEVLGG

MS022385 (gene) of Bitter gourd (TR) v1 genome