; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022388 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022388
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description50S ribosomal protein L6
Genome locationscaffold47:2990525..2991634
RNA-Seq ExpressionMS022388
SyntenyMS022388
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000702 - Ribosomal protein L6
IPR002358 - Ribosomal protein L6, conserved site
IPR019906 - Ribosomal protein L6, bacterial-type
IPR020040 - Ribosomal protein L6, alpha-beta domain
IPR036789 - Ribosomal protein L6, alpha-beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572299.1 50S ribosomal protein L6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-11094.42Show/hide
Query:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
        +NFRSTFLGEKNGF++STMPV H G+LRKTIECKESRIGKQPIQVPSNV I LQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKA+ETRRA QMH
Subjt:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH

Query:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIP+GLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEVVRRKEGKAGKKK
        DEVVRRKEGKAGKKK
Subjt:  DEVVRRKEGKAGKKK

XP_004144493.1 50S ribosomal protein L6, chloroplastic [Cucumis sativus]1.1e-11093.02Show/hide
Query:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
        +NFRSTFLGEKNGF VS MP CHIGLLRKTIECKESRIGKQPIQVPS+VTI LQGQDLKVKGPLGELSILYPREVKIEREDSGI+RVKKA+ETRRA QMH
Subjt:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH

Query:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPVRMAIPDG+Q+KVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEVVRRKEGKAGKKK
        DE+VRRKEGKAGKKK
Subjt:  DEVVRRKEGKAGKKK

XP_008455431.1 PREDICTED: 50S ribosomal protein L6, chloroplastic [Cucumis melo]9.8e-11293.95Show/hide
Query:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
        +NFRSTFLGEKNGF VS MPVCHIGLLRKTIECKESRIGKQPIQVPSNVTI LQGQDLKVKGPLGELSILYPREVKIEREDSGI+RVKKA+ETRRA QMH
Subjt:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH

Query:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPVRMAIPDG+Q+KVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEVVRRKEGKAGKKK
        DE+VRRKEGKAGKKK
Subjt:  DEVVRRKEGKAGKKK

XP_022136314.1 50S ribosomal protein L6, chloroplastic [Momordica charantia]1.9e-11599.53Show/hide
Query:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
        SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNV IALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
Subjt:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH

Query:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEVVRRKEGKAGKKK
        DEVVRRKEGKAGKKK
Subjt:  DEVVRRKEGKAGKKK

XP_038888704.1 50S ribosomal protein L6, chloroplastic [Benincasa hispida]1.8e-11093.02Show/hide
Query:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
        +NFRSTFLGE+NGF VS MPVCHIG+LRKTIECKESRIGKQPI VPSNVTI+LQGQDLKVKGPLGELSILYPRE+KIEREDSGI+RVKKA+ETRRA QMH
Subjt:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH

Query:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPV+MAIPDG+QVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEVVRRKEGKAGKKK
        DE+VRRKEGKAGKKK
Subjt:  DEVVRRKEGKAGKKK

TrEMBL top hitse value%identityAlignment
A0A0A0K3K9 Uncharacterized protein5.2e-11193.02Show/hide
Query:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
        +NFRSTFLGEKNGF VS MP CHIGLLRKTIECKESRIGKQPIQVPS+VTI LQGQDLKVKGPLGELSILYPREVKIEREDSGI+RVKKA+ETRRA QMH
Subjt:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH

Query:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPVRMAIPDG+Q+KVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEVVRRKEGKAGKKK
        DE+VRRKEGKAGKKK
Subjt:  DEVVRRKEGKAGKKK

A0A1S3C0W5 50S ribosomal protein L6, chloroplastic4.7e-11293.95Show/hide
Query:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
        +NFRSTFLGEKNGF VS MPVCHIGLLRKTIECKESRIGKQPIQVPSNVTI LQGQDLKVKGPLGELSILYPREVKIEREDSGI+RVKKA+ETRRA QMH
Subjt:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH

Query:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQL+GVGYRAM+EGKDLVLNLGFSHPVRMAIPDG+Q+KVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEVVRRKEGKAGKKK
        DE+VRRKEGKAGKKK
Subjt:  DEVVRRKEGKAGKKK

A0A6J1C3Z5 50S ribosomal protein L6, chloroplastic9.2e-11699.53Show/hide
Query:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
        SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNV IALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
Subjt:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH

Query:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEVVRRKEGKAGKKK
        DEVVRRKEGKAGKKK
Subjt:  DEVVRRKEGKAGKKK

A0A6J1ER61 50S ribosomal protein L6, chloroplastic isoform X28.9e-11195.35Show/hide
Query:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
        SNFRSTFLGEKNGFS STMPV HI  LRKTIECKESRIGKQPIQVPSNVTI LQGQDLKVKGPLGELS+LYPREVKIER+DSGILRVKKA+ETRRA QMH
Subjt:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH

Query:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEVVRRKEGKAGKKK
        DEVVRRKEGKAGKKK
Subjt:  DEVVRRKEGKAGKKK

A0A6J1GLT4 50S ribosomal protein L6, chloroplastic-like8.9e-11193.95Show/hide
Query:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
        +NFRSTFLGEKNGF++STMPV H G+LRKTIECKESRIGKQPIQVPSNV I LQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKA+ETRRA QMH
Subjt:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH

Query:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIP+GLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEVVRRKEGKAGKKK
        DE+VRRKEGKAGKKK
Subjt:  DEVVRRKEGKAGKKK

SwissProt top hitse value%identityAlignment
B0C1E7 50S ribosomal protein L61.7e-5057.54Show/hide
Query:  SRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEG
        SRIGK PI +P  V + ++GQ + VKGP GELS     EV IE+ D+ ++ V +  E+R A+Q HGL RTL  NMV GVS+GFEKKLQ+ GVGYRA ++G
Subjt:  SRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEG

Query:  KDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKK
        ++L+LN+G+S+PV +  P+G+QV VE NT + VSG +K  +G  AA IR  RPPEPYKGKG++YADE VRRK GKAGKK
Subjt:  KDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKK

B1WQS5 50S ribosomal protein L62.2e-5054.75Show/hide
Query:  SRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEG
        SRIGK+PI +P+ VTI ++GQ + VKGP G L +  P EV + +E   +  V++  ++R A++ HGLFRTL  NM+ GVS+GFEK+L + GVGYRA  +G
Subjt:  SRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEG

Query:  KDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKK
          L LN+G+S PV M +P G+ V VE NT++ VSG DK  +G  AA IR  RPPEPYKGKG++Y DE VRRK GKAGKK
Subjt:  KDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKK

B7KI01 50S ribosomal protein L62.2e-5055.87Show/hide
Query:  SRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEG
        SRIGK+PI +P+ VT+ + G  + VKGP GEL    P  V +E +D G+LRV +  ++R A+Q HGL RTL  NMV GVS+GFEK+L++ GVGYRA  +G
Subjt:  SRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEG

Query:  KDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKK
          L LN+G+S PV M +P G+ V VE+NT IT++G DK  +G  AA IR  RPPEPYKGKG++Y  EVVRRK GK GKK
Subjt:  KDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKK

O23049 50S ribosomal protein L6, chloroplastic1.9e-9479.25Show/hide
Query:  RSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLF
        RS FLG++N F VS+ P   +G   KTIECKESRIGKQPI VPSNVTIAL+GQDLKVKGPLGEL++ YPREV++ +E+SG LRVKK VETRRA QMHGLF
Subjt:  RSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLF

Query:  RTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEV
        RTLTDNMVVGVS+GFEKKL LVGVGYRA ++GK+LVLNLGFSHPV+M IPD L+VKVEENTRITVSGYDK  IGQFAA++R+WRPPEPYKGKGVKY+DE+
Subjt:  RTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEV

Query:  VRRKEGKAGKKK
        VRRKEGKAGKKK
Subjt:  VRRKEGKAGKKK

P82193 50S ribosomal protein L6, chloroplastic5.2e-9277.67Show/hide
Query:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH
        S+ +S FLG K   S S +PV  IG  RK+++CKESRIGKQPI VP+NV IA++GQDLKVKGPLGELSI YPREV +E+++SG LRV+KAVETRRA QMH
Subjt:  SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMH

Query:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVS+GFEKKLQLVGVGYRA +EGKDL+L+LGFSHPVRMAIPD LQVKVEENT++TVSG DK  +GQFAA+IR WRPPEPYKGKGV+Y 
Subjt:  GLFRTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEVVRRKEGKAGKKK
        DEVVRRKEGKAGKKK
Subjt:  DEVVRRKEGKAGKKK

Arabidopsis top hitse value%identityAlignment
AT1G05190.1 Ribosomal protein L6 family1.4e-9579.25Show/hide
Query:  RSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLF
        RS FLG++N F VS+ P   +G   KTIECKESRIGKQPI VPSNVTIAL+GQDLKVKGPLGEL++ YPREV++ +E+SG LRVKK VETRRA QMHGLF
Subjt:  RSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLF

Query:  RTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEV
        RTLTDNMVVGVS+GFEKKL LVGVGYRA ++GK+LVLNLGFSHPV+M IPD L+VKVEENTRITVSGYDK  IGQFAA++R+WRPPEPYKGKGVKY+DE+
Subjt:  RTLTDNMVVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEV

Query:  VRRKEGKAGKKK
        VRRKEGKAGKKK
Subjt:  VRRKEGKAGKKK

AT2G18400.1 ribosomal protein L6 family protein1.4e-2047.96Show/hide
Query:  FEKKLQLVGVGYRAMLE--GKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGK
        F + L++VGVGY+A  E  G+ L L LG+SH V +A+P  ++V   +N  +  +G DK  + QFAA++R  +PPEPYKGKG+ Y DEVV++K+GK  K
Subjt:  FEKKLQLVGVGYRAMLE--GKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCAATTTTCGGTCTACATTTTTGGGAGAGAAAAATGGATTCTCTGTTTCTACAATGCCTGTATGTCACATTGGTCTCTTGAGGAAGACTATAGAATGCAAGGAATCACG
AATAGGGAAGCAACCTATTCAAGTGCCATCCAATGTAACCATCGCACTGCAGGGCCAGGATTTGAAAGTTAAGGGTCCTTTGGGAGAGCTCTCAATACTTTATCCAAGAG
AAGTGAAGATTGAGAGGGAAGATTCTGGGATCTTAAGGGTTAAGAAGGCAGTGGAGACAAGAAGAGCCAAGCAAATGCATGGGCTTTTCAGGACGCTTACAGATAATATG
GTGGTAGGAGTATCCAGGGGGTTTGAGAAGAAACTTCAGTTGGTCGGTGTTGGTTATCGAGCAATGTTAGAAGGAAAAGACTTGGTATTAAATCTCGGGTTCTCTCATCC
AGTTAGAATGGCCATTCCTGACGGTCTTCAAGTAAAGGTGGAAGAAAACACCAGAATCACGGTTAGTGGATATGATAAATGTGCCATTGGTCAGTTTGCCGCTTCTATTA
GACAATGGAGACCCCCGGAACCGTATAAGGGTAAAGGAGTGAAATATGCTGATGAAGTTGTCAGAAGAAAGGAGGGGAAAGCAGGGAAGAAGAAG
mRNA sequenceShow/hide mRNA sequence
AGCAATTTTCGGTCTACATTTTTGGGAGAGAAAAATGGATTCTCTGTTTCTACAATGCCTGTATGTCACATTGGTCTCTTGAGGAAGACTATAGAATGCAAGGAATCACG
AATAGGGAAGCAACCTATTCAAGTGCCATCCAATGTAACCATCGCACTGCAGGGCCAGGATTTGAAAGTTAAGGGTCCTTTGGGAGAGCTCTCAATACTTTATCCAAGAG
AAGTGAAGATTGAGAGGGAAGATTCTGGGATCTTAAGGGTTAAGAAGGCAGTGGAGACAAGAAGAGCCAAGCAAATGCATGGGCTTTTCAGGACGCTTACAGATAATATG
GTGGTAGGAGTATCCAGGGGGTTTGAGAAGAAACTTCAGTTGGTCGGTGTTGGTTATCGAGCAATGTTAGAAGGAAAAGACTTGGTATTAAATCTCGGGTTCTCTCATCC
AGTTAGAATGGCCATTCCTGACGGTCTTCAAGTAAAGGTGGAAGAAAACACCAGAATCACGGTTAGTGGATATGATAAATGTGCCATTGGTCAGTTTGCCGCTTCTATTA
GACAATGGAGACCCCCGGAACCGTATAAGGGTAAAGGAGTGAAATATGCTGATGAAGTTGTCAGAAGAAAGGAGGGGAAAGCAGGGAAGAAGAAG
Protein sequenceShow/hide protein sequence
SNFRSTFLGEKNGFSVSTMPVCHIGLLRKTIECKESRIGKQPIQVPSNVTIALQGQDLKVKGPLGELSILYPREVKIEREDSGILRVKKAVETRRAKQMHGLFRTLTDNM
VVGVSRGFEKKLQLVGVGYRAMLEGKDLVLNLGFSHPVRMAIPDGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEVVRRKEGKAGKKK