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MS022396 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022396
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUbiquitin-like domain-containing protein
Genome locationscaffold47:3044419..3044760
RNA-Seq ExpressionMS022396
SyntenyMS022396
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589175.1 hypothetical protein SDJN03_17740, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2155.26Show/hide
Query:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHH
        MKL  ENLTGSLF+++V D ATV DL+ EIS+  +  LPSDRL+F+ D + GR IS  DDG SLVD G++DGS IY+FF PLD     D G DD D    
Subjt:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHH

Query:  SRLFFFTCHNILLF
        +R  FF C ++LLF
Subjt:  SRLFFFTCHNILLF

KGN43536.1 hypothetical protein Csa_020453 [Cucumis sativus]4.8e-2560.53Show/hide
Query:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAH-HNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDH
        MKL V+NLTGSLF ++V+DDATVSDL+ +I+AH H ++LPS RLIFI D NP R IS+ DDG SLVD G++DGSHIYIFF PL H+DD D        D 
Subjt:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAH-HNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDH

Query:  HSRLFFFTCHNILL
         +R FFFT  + LL
Subjt:  HSRLFFFTCHNILL

XP_022136124.1 uncharacterized protein LOC111007894 [Momordica charantia]2.1e-60100Show/hide
Query:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHH
        MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHH
Subjt:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHH

Query:  SRLFFFTCHNILLF
        SRLFFFTCHNILLF
Subjt:  SRLFFFTCHNILLF

XP_022930696.1 uncharacterized protein LOC111437093 [Cucurbita moschata]5.5e-2155.26Show/hide
Query:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHH
        MKL  ENLTGSLF+++V D ATV DL+ EIS+  +  LPSDRL+F+ D + GR IS  DDG SLVD G++DGS IY+FF PLD E     G DD D    
Subjt:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHH

Query:  SRLFFFTCHNILLF
        +R  FF C ++LLF
Subjt:  SRLFFFTCHNILLF

XP_022989504.1 uncharacterized protein LOC111486561 [Cucurbita maxima]2.2e-2257.02Show/hide
Query:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHH
        MKL  ENLTGSLF+++V D ATV DL+ EIS+  +  LPSDRL+F+ D + GR IS  DDG SLVD G++DGS IYIFF PLD     D GGDD D    
Subjt:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHH

Query:  SRLFFFTCHNILLF
        +R  FF C ++LLF
Subjt:  SRLFFFTCHNILLF

TrEMBL top hitse value%identityAlignment
A0A0A0K6V6 Ubiquitin-like domain-containing protein2.3e-2560.53Show/hide
Query:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAH-HNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDH
        MKL V+NLTGSLF ++V+DDATVSDL+ +I+AH H ++LPS RLIFI D NP R IS+ DDG SLVD G++DGSHIYIFF PL H+DD D        D 
Subjt:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAH-HNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDH

Query:  HSRLFFFTCHNILL
         +R FFFT  + LL
Subjt:  HSRLFFFTCHNILL

A0A6J1C3E5 uncharacterized protein LOC1110078941.0e-60100Show/hide
Query:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHH
        MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHH
Subjt:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHH

Query:  SRLFFFTCHNILLF
        SRLFFFTCHNILLF
Subjt:  SRLFFFTCHNILLF

A0A6J1ERN4 uncharacterized protein LOC1114370932.7e-2155.26Show/hide
Query:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHH
        MKL  ENLTGSLF+++V D ATV DL+ EIS+  +  LPSDRL+F+ D + GR IS  DDG SLVD G++DGS IY+FF PLD E     G DD D    
Subjt:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHH

Query:  SRLFFFTCHNILLF
        +R  FF C ++LLF
Subjt:  SRLFFFTCHNILLF

A0A6J1JPI4 uncharacterized protein LOC1114865611.1e-2257.02Show/hide
Query:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHH
        MKL  ENLTGSLF+++V D ATV DL+ EIS+  +  LPSDRL+F+ D + GR IS  DDG SLVD G++DGS IYIFF PLD     D GGDD D    
Subjt:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHH

Query:  SRLFFFTCHNILLF
        +R  FF C ++LLF
Subjt:  SRLFFFTCHNILLF

A0A7N2MBI9 Ubiquitin-like domain-containing protein3.9e-2063.86Show/hide
Query:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLD
        M++ VENLTG+LF+IQV +DAT++DLK EI A     LP DRLI I D+N GRP++   DG SLVDCGV+DGSHIY+FF+PLD
Subjt:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32360.1 Ubiquitin-like superfamily protein9.4e-1141.41Show/hide
Query:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIF-IADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFF-HP-LDHEDDRDHGGDDPD
        MK++VE +TG+     V +DATV  +K +I+      LP  RLI  I D+   R + +D+D   L D GV + SHIY+FF HP L  +++R  G DD D
Subjt:  MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIF-IADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFF-HP-LDHEDDRDHGGDDPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTGGCGGTGGAAAACTTGACCGGTTCTCTGTTCCACATTCAGGTCAAAGACGACGCCACCGTGTCTGATCTTAAGGCCGAGATCAGTGCCCACCACAACAACGA
CCTCCCTTCTGACCGTCTGATCTTCATCGCCGACGACAACCCTGGCCGACCGATCAGTAAGGACGATGATGGATTCTCGCTCGTTGATTGTGGCGTCAAAGATGGGTCCC
ACATTTATATCTTTTTCCATCCGCTTGATCATGAAGATGATCGTGATCATGGCGGTGATGATCCTGATCAGGATCATCACTCTCGCCTCTTCTTCTTTACGTGTCACAAT
ATTCTTCTCTTC
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTGGCGGTGGAAAACTTGACCGGTTCTCTGTTCCACATTCAGGTCAAAGACGACGCCACCGTGTCTGATCTTAAGGCCGAGATCAGTGCCCACCACAACAACGA
CCTCCCTTCTGACCGTCTGATCTTCATCGCCGACGACAACCCTGGCCGACCGATCAGTAAGGACGATGATGGATTCTCGCTCGTTGATTGTGGCGTCAAAGATGGGTCCC
ACATTTATATCTTTTTCCATCCGCTTGATCATGAAGATGATCGTGATCATGGCGGTGATGATCCTGATCAGGATCATCACTCTCGCCTCTTCTTCTTTACGTGTCACAAT
ATTCTTCTCTTC
Protein sequenceShow/hide protein sequence
MKLAVENLTGSLFHIQVKDDATVSDLKAEISAHHNNDLPSDRLIFIADDNPGRPISKDDDGFSLVDCGVKDGSHIYIFFHPLDHEDDRDHGGDDPDQDHHSRLFFFTCHN
ILLF