; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022397 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022397
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionubiquitin-like protein-NEDD8-like protein RUB3
Genome locationscaffold47:3045558..3046319
RNA-Seq ExpressionMS022397
SyntenyMS022397
Gene Ontology termsGO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0031593 - polyubiquitin modification-dependent protein binding (molecular function)
GO:0043130 - ubiquitin binding (molecular function)
GO:0070628 - proteasome binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011917.1 ubi, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-11180.31Show/hide
Query:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN
        MEIFVVT GHEFAIEISNQE +LEIKRK+EQFIGIP++SQ LS+YGCELVDGLDMEDY+FISEGSRIDLSI+QIIAPP          PI+V+FSGRQIN
Subjt:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN

Query:  VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD
        +++D TETV  LK+KIQ I GTP+Q MSLFHSGVEL +D RNLS+FGIGE SEV VF+KT SR+SD PWR VSFVV+TSSSLLNAACIPMEMKDS+TVGD
Subjt:  VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD

Query:  VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY
        VRELLLAGK+LPDDDYLFIHKQRIMRDKCSLRWHGV+NGDFLYVFKGTVS GE+
Subjt:  VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY

XP_022136123.1 ubiquitin-like protein-NEDD8-like protein RUB3 [Momordica charantia]7.7e-14099.61Show/hide
Query:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN
        MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN
Subjt:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN

Query:  VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD
        VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFS+VIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD
Subjt:  VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD

Query:  VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY
        VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY
Subjt:  VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY

XP_022952137.1 uncharacterized protein LOC111454902 [Cucurbita moschata]1.0e-11280.71Show/hide
Query:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN
        MEIFVVT GHEFAIEISNQE +LEIKRK+EQFIGIP++SQ LS+YGCELVDGLDMEDY+FISEGSRIDLSI+QIIAPP       +  PI+V+FSGRQIN
Subjt:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN

Query:  VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD
        +++D TETV  LK+KIQ I GTP+Q MSLFHSGVELG+D RNLSEFGI E SEV VF+KT SR+SD PWR VSFVV+TSSSLLNAACIPMEMKDS+TVGD
Subjt:  VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD

Query:  VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY
        VRELLLAGK+LPDDDYLFIHKQRIMRDKCSLRWHGV+NGDFLYVFKGTVS GE+
Subjt:  VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY

XP_022968884.1 uncharacterized protein LOC111468065 [Cucurbita maxima]7.5e-11179.45Show/hide
Query:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN
        MEIFVVT GHEFAIEISNQE +LEIKRK+EQFIGIP++SQ LS+YGCELVDGLDMEDY+FISEGSRIDLSI+QIIAPP       +  PI+V+FSGRQIN
Subjt:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN

Query:  VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD
        +++D TETV  LK+KIQ I GTP+Q +SLFHSGVELG+D RNLS+FGIGE SEV VF+KT SR+SD PWR VSFVV+TSSSLL+AACIPMEMKDS+TVGD
Subjt:  VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD

Query:  VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGE
        VRELLLAGK+LPDDDYLFIH+QRIM+DKCSLRWHGV+NGDFLYVFKGTVS GE
Subjt:  VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGE

XP_023554594.1 uncharacterized protein LOC111811794 [Cucurbita pepo subsp. pepo]5.7e-11179.13Show/hide
Query:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN
        MEIFVVT GHEFAIEISNQE +LEIKRK++QFIGIP++SQ LS+YGCELVDGLDMEDY+FISEGSRIDLSI+Q+ APP       +  PI+V+FSGRQIN
Subjt:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN

Query:  VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD
        +++D TETV  LK+KIQ I GTP+Q MSLFHSGVEL +D RNLS+FGIGE SEV VF+KT SR+SD PWR VSFVV+TSSSLLNAACIPMEMKDS+TVGD
Subjt:  VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD

Query:  VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY
        VRELLLAGK+LPDDDYLFIHKQRIMRDKCSLRWHGV+NGDFLYVFKGTVS GE+
Subjt:  VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY

TrEMBL top hitse value%identityAlignment
A0A0A0K5K6 Uncharacterized protein4.2e-9972.76Show/hide
Query:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDY-EFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI
        M+IF+VT GHEF I+I NQE I+EIKRK+EQFIGIP+ESQ LS+YGCEL+DGL MEDY +FI+EGSRIDLS++QIIAP       +++ PI V+FSG++I
Subjt:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDY-EFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI

Query:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRV--SDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTT
        N+ +D TETV  LK+KIQ I   P+Q MSLFHSG+EL +DC+NLSEFGIGEFSEVIVF+KT SR    DS  R VSFVV+ SSSLLNAACIPMEMKDS+T
Subjt:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRV--SDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTT

Query:  VGDVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY
        V DVRELLL+GK+LPDD+YLFIHKQRIMRDK SLRWHGVENGDFLYVFKGTVS GE+
Subjt:  VGDVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY

A0A1S3C1K2 uncharacterized protein LOC1034955792.3e-9771.54Show/hide
Query:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDY-EFISEGSRIDLS-INQIIAPPILNLQTASKIPITVKFSGRQ
        M+IF+VT GHEF IEI NQE I+EIKRK+EQFIGIP+ESQ LS+YGCELVDGL MEDY +FI+E SRIDLS ++QIIAP       +++ PI V+FSG++
Subjt:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDY-EFISEGSRIDLS-INQIIAPPILNLQTASKIPITVKFSGRQ

Query:  INVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRV----SDSPWRNVSFVVQTSSSLLNAACIPMEMKD
        IN+ +D TETV  LK+KIQ I G P+Q MSLFHSG+ELG+DC+N+SEFGIGEFSEVIVF+KT SR     S+S  + +SFVV+TSSSLLNAACIPMEMKD
Subjt:  INVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRV----SDSPWRNVSFVVQTSSSLLNAACIPMEMKD

Query:  STTVGDVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY
        S+TV DV+ELLL GK+LPDD+YLFIHKQRIMR+K SLRWHGVENGDFLYVFKGTVS GE+
Subjt:  STTVGDVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY

A0A6J1C6R7 ubiquitin-like protein-NEDD8-like protein RUB33.7e-14099.61Show/hide
Query:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN
        MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN
Subjt:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN

Query:  VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD
        VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFS+VIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD
Subjt:  VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD

Query:  VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY
        VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY
Subjt:  VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY

A0A6J1GJL4 uncharacterized protein LOC1114549025.1e-11380.71Show/hide
Query:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN
        MEIFVVT GHEFAIEISNQE +LEIKRK+EQFIGIP++SQ LS+YGCELVDGLDMEDY+FISEGSRIDLSI+QIIAPP       +  PI+V+FSGRQIN
Subjt:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN

Query:  VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD
        +++D TETV  LK+KIQ I GTP+Q MSLFHSGVELG+D RNLSEFGI E SEV VF+KT SR+SD PWR VSFVV+TSSSLLNAACIPMEMKDS+TVGD
Subjt:  VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD

Query:  VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY
        VRELLLAGK+LPDDDYLFIHKQRIMRDKCSLRWHGV+NGDFLYVFKGTVS GE+
Subjt:  VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY

A0A6J1I0Y4 uncharacterized protein LOC1114680653.6e-11179.45Show/hide
Query:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN
        MEIFVVT GHEFAIEISNQE +LEIKRK+EQFIGIP++SQ LS+YGCELVDGLDMEDY+FISEGSRIDLSI+QIIAPP       +  PI+V+FSGRQIN
Subjt:  MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQIN

Query:  VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD
        +++D TETV  LK+KIQ I GTP+Q +SLFHSGVELG+D RNLS+FGIGE SEV VF+KT SR+SD PWR VSFVV+TSSSLL+AACIPMEMKDS+TVGD
Subjt:  VEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGD

Query:  VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGE
        VRELLLAGK+LPDDDYLFIH+QRIM+DKCSLRWHGV+NGDFLYVFKGTVS GE
Subjt:  VRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGE

SwissProt top hitse value%identityAlignment
P0CG70 Polyubiquitin1.5e-1324.9Show/hide
Query:  MEIFVVTF-GHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI
        M+IFV T  G    +E+ + + I  +K+K++   GIP + Q L   G +L DG  + DY  I + S + L         +L L+   +I +    +G+ I
Subjt:  MEIFVVTF-GHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI

Query:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVG
         +EV+ ++T+  +K+KIQ  +G P     L  +G +L +D R LS++ I + S + + ++ +          +   V+T    L    I +E++ S T+ 
Subjt:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVG

Query:  DVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYV
        +V++ +   + +P D    I   + + D  +L  + ++    L++
Subjt:  DVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYV

P0CG73 Polyubiquitin7.5e-1324.8Show/hide
Query:  MEIFVVTF-GHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVK-FSGRQ
        M+IFV T  G    +E+ + + I  +K K++   GIP + Q L   G +L DG  + DY    E +              L L++   + I VK  +G+ 
Subjt:  MEIFVVTF-GHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVK-FSGRQ

Query:  INVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTV
        I +EV+ ++T+  +K KIQ  +G P     L  +G +L +D R LS++ I + S + + ++ +          +   V+T    L    I +E++ S T+
Subjt:  INVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTV

Query:  GDVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYV
         +V+  +   + +P D    I   + + D  +L  + ++    L++
Subjt:  GDVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYV

P0CG74 Polyubiquitin7.5e-1324.9Show/hide
Query:  MEIFVVTF-GHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI
        M+IFV T  G    +E+ + + I  +K K++   GIP + Q L   G +L DG  + DY  I + S + L         +L L+   +I +    +G+ I
Subjt:  MEIFVVTF-GHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI

Query:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVG
         +EV+ ++T+  +K KIQ  +G P     L  +G +L +D R LS++ I + S + + ++ +          +   V+T    L    I +E++ S T+ 
Subjt:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVG

Query:  DVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYV
        +V+  +   + +P D    I   + + D  +L  + ++    L++
Subjt:  DVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYV

P42739 Polyubiquitin (Fragment)2.0e-1325.31Show/hide
Query:  MEIFVVTF-GHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI
        M+IFV T  G    +E+ + + +  +K K++   GIP + Q L   G +L DGL + DY  I + S + L         +L L+   +I +    +G+ I
Subjt:  MEIFVVTF-GHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI

Query:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVG
         +EV+ ++TV  +K KIQ  +G P     L  +G +L +D R L+++ I + S + + ++ +          +   V+T    L    I +E++ S TV 
Subjt:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVG

Query:  DVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYV
        +V+  +   + +P D    I   + + D  +L  + ++    L++
Subjt:  DVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYV

Q8MKD1 Polyubiquitin-B5.7e-1325.31Show/hide
Query:  MEIFVVTF-GHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI
        M+IFV T  G    +E+   + I  +K K++   GIP + Q L   G +L DG  + DY  I + S + L         +L L+   +I +    +G+ I
Subjt:  MEIFVVTF-GHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI

Query:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVG
         +EV+ ++T+  +K KIQ  +G P     L  +G +L +D R LS++ I + S + + ++ +          +   V+T    L    I +E++ S T+ 
Subjt:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVG

Query:  DVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYV
        +V+  +   + +P D   FI   + + D  +L  + ++    L++
Subjt:  DVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYV

Arabidopsis top hitse value%identityAlignment
AT2G32350.1 Ubiquitin-like superfamily protein2.1e-7153.78Show/hide
Query:  IEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQINVEVDITETVRGLK
        +EIS QE +LE+K+++ QF+ IP  S  L +   EL+DGLD+EDY  IS G+RIDL++  +   P        KI +TVKF  +Q  VEVD TETV  LK
Subjt:  IEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQINVEVDITETVRGLK

Query:  EKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSD-SPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGDVRELLLAGKVLP
        +KI  ++ TP++ M L++SG+EL DD RNL+E+GI EFSE++VF+K+ +R  D +P R + F+VQTSSSL N A IP+E+KD+ T+ ++RE L A K LP
Subjt:  EKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSD-SPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGDVRELLLAGKVLP

Query:  DDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVS
         D+Y+F+HKQRIMR+ CSLRWHGVENGD L+VFKG++S
Subjt:  DDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVS

AT4G02890.1 Ubiquitin family protein2.6e-1324.49Show/hide
Query:  MEIFVVTF-GHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI
        M+IFV T  G    +E+ + + I  +K K++   GIP + Q L   G +L DG  + DY  I + S + L         +L L+   +I +    +G+ I
Subjt:  MEIFVVTF-GHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI

Query:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVG
         +EV+ ++T+  +K KIQ  +G P     L  +G +L +D R L+++ I + S + + ++ +          +   V+T    L    I +E++ S T+ 
Subjt:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVG

Query:  DVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYV
        +V+  +   + +P D    I   + + D  +L  + ++    L++
Subjt:  DVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYV

AT4G05050.1 ubiquitin 112.6e-1324.49Show/hide
Query:  MEIFVVTF-GHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI
        M+IFV T  G    +E+ + + I  +K K++   GIP + Q L   G +L DG  + DY  I + S + L         +L L+   +I +    +G+ I
Subjt:  MEIFVVTF-GHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI

Query:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVG
         +EV+ ++T+  +K KIQ  +G P     L  +G +L +D R L+++ I + S + + ++ +          +   V+T    L    I +E++ S T+ 
Subjt:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVG

Query:  DVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYV
        +V+  +   + +P D    I   + + D  +L  + ++    L++
Subjt:  DVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYV

AT4G05230.1 Ubiquitin-like superfamily protein9.1e-1427.91Show/hide
Query:  MEIFVVT-FGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI
        M++F  T  G  F IE+   + +LEIK+K+E++  IPV  Q L   G  L D LD+E    ++  SRI LSI+   +P     Q+ + I +   F   Q 
Subjt:  MEIFVVT-FGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI

Query:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVG
               +T  G  E    I   PM   +  ++  +L                 V+V  K+ +R                        IP+++     VG
Subjt:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVG

Query:  DVRELLLAGK-----VLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPG
        ++R+ L   +      LP + Y FI+KQ +M +  S RWH V+ GD + +F G+VS G
Subjt:  DVRELLLAGK-----VLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYVFKGTVSPG

AT4G05320.2 polyubiquitin 102.6e-1324.49Show/hide
Query:  MEIFVVTF-GHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI
        M+IFV T  G    +E+ + + I  +K K++   GIP + Q L   G +L DG  + DY  I + S + L         +L L+   +I +    +G+ I
Subjt:  MEIFVVTF-GHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQI

Query:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVG
         +EV+ ++T+  +K KIQ  +G P     L  +G +L +D R L+++ I + S + + ++ +          +   V+T    L    I +E++ S T+ 
Subjt:  NVEVDITETVRGLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVG

Query:  DVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYV
        +V+  +   + +P D    I   + + D  +L  + ++    L++
Subjt:  DVRELLLAGKVLPDDDYLFIHKQRIMRDKCSLRWHGVENGDFLYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATATTCGTAGTAACATTCGGACACGAATTCGCCATAGAAATAAGCAATCAAGAACCAATCCTCGAGATCAAAAGAAAGGTCGAACAGTTCATCGGCATTCCCGT
GGAATCGCAAGCTCTCTCGATTTACGGATGCGAATTAGTCGACGGACTCGACATGGAGGATTACGAATTCATCTCGGAAGGTTCGCGAATCGATCTTTCAATCAACCAAA
TCATCGCACCGCCGATTCTGAATCTGCAAACAGCAAGCAAGATTCCGATCACCGTGAAATTCTCCGGCCGGCAGATAAACGTGGAGGTTGATATAACAGAGACGGTTCGC
GGATTGAAGGAGAAAATCCAGACAATCGACGGGACGCCGATGCAAGGAATGTCGTTGTTCCATTCCGGAGTGGAATTAGGCGACGATTGCCGGAATTTGAGCGAGTTTGG
AATCGGCGAATTTTCTGAAGTGATCGTGTTCGTGAAAACGAAGAGTCGTGTGAGCGATTCGCCGTGGAGGAATGTGAGTTTCGTGGTGCAGACGTCGTCGAGTTTGCTTA
ATGCGGCGTGTATTCCGATGGAAATGAAGGATTCGACCACCGTCGGCGACGTGAGGGAACTGCTTTTGGCCGGAAAAGTTCTTCCGGACGACGATTATCTGTTCATACAC
AAACAGAGGATTATGAGAGATAAGTGTAGTTTAAGATGGCATGGGGTCGAAAATGGCGATTTTCTCTATGTTTTTAAAGGCACCGTTAGCCCCGGTGAATAT
mRNA sequenceShow/hide mRNA sequence
ATGGAGATATTCGTAGTAACATTCGGACACGAATTCGCCATAGAAATAAGCAATCAAGAACCAATCCTCGAGATCAAAAGAAAGGTCGAACAGTTCATCGGCATTCCCGT
GGAATCGCAAGCTCTCTCGATTTACGGATGCGAATTAGTCGACGGACTCGACATGGAGGATTACGAATTCATCTCGGAAGGTTCGCGAATCGATCTTTCAATCAACCAAA
TCATCGCACCGCCGATTCTGAATCTGCAAACAGCAAGCAAGATTCCGATCACCGTGAAATTCTCCGGCCGGCAGATAAACGTGGAGGTTGATATAACAGAGACGGTTCGC
GGATTGAAGGAGAAAATCCAGACAATCGACGGGACGCCGATGCAAGGAATGTCGTTGTTCCATTCCGGAGTGGAATTAGGCGACGATTGCCGGAATTTGAGCGAGTTTGG
AATCGGCGAATTTTCTGAAGTGATCGTGTTCGTGAAAACGAAGAGTCGTGTGAGCGATTCGCCGTGGAGGAATGTGAGTTTCGTGGTGCAGACGTCGTCGAGTTTGCTTA
ATGCGGCGTGTATTCCGATGGAAATGAAGGATTCGACCACCGTCGGCGACGTGAGGGAACTGCTTTTGGCCGGAAAAGTTCTTCCGGACGACGATTATCTGTTCATACAC
AAACAGAGGATTATGAGAGATAAGTGTAGTTTAAGATGGCATGGGGTCGAAAATGGCGATTTTCTCTATGTTTTTAAAGGCACCGTTAGCCCCGGTGAATAT
Protein sequenceShow/hide protein sequence
MEIFVVTFGHEFAIEISNQEPILEIKRKVEQFIGIPVESQALSIYGCELVDGLDMEDYEFISEGSRIDLSINQIIAPPILNLQTASKIPITVKFSGRQINVEVDITETVR
GLKEKIQTIDGTPMQGMSLFHSGVELGDDCRNLSEFGIGEFSEVIVFVKTKSRVSDSPWRNVSFVVQTSSSLLNAACIPMEMKDSTTVGDVRELLLAGKVLPDDDYLFIH
KQRIMRDKCSLRWHGVENGDFLYVFKGTVSPGEY