CuGenDBv2

Gene ID	MS022400
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	zinc finger CCCH domain-containing protein 40-like isoform X1
Genome location	scaffold47:3060648..3067447
RNA-Seq Expression	MS022400
Synteny	MS022400
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000571 - Zinc finger, CCCH-type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022136017.1 zinc finger CCCH domain-containing protein 13 [Momordica charantia]

1.6e-225

93.83

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW
        MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNG              RREYRGSDLRHKLDNRHSPLQERDSRGRHGPR +YSSSW
Subjt:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW

Query:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER
        SLERQSDRKRRKKEHGDSHNDYSGSLRISDRS+ERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER
Subjt:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER

Query:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ
        EECKRIKSKIKKFVKAHNRYTRIQDELKR          QLASDVSKIGANEEDSSINIVSDGEDPGYHAASP RDLQKDASSSKKKMHVIQDIAENSKQ
Subjt:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ

Query:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN
        ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN
Subjt:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN

Query:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA
        ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA
Subjt:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA

XP_022930759.1 zinc finger CCCH domain-containing protein 40-like isoform X2 [Cucurbita moschata]

1.6e-185

79.3

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW
        M+VG KLFKTKLCVLYQKGRCSRPSCSFAHG+AELRRFA   GA++G              RREYRG+DLRHKLD+RHSPLQERDSRGRHGPR  YSSSW
Subjt:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW

Query:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER
        SLERQSDRKRRKKE+GDS NDYSG+LRISDRSEERDREGKI SS SRD LEGQLNKMQADIEMAEHHKHQAEVYL+E+IQEVDSLTSRIQELESQLYKER
Subjt:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER

Query:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ
        E+ +RIKSKIKKFVKAHNRY+RIQDELKR          QL SDV+KIGANEEDSSINIVSDGEDPG+HA SPL DLQKD S+SKKK H++QDIA NSK+
Subjt:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ

Query:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN
        ADL KGSKEAV R +RFSRWNAHP+QS+YSKIE VGN++NDLIPTANESKQKRG+TS++V +ADK+RGLESGVVVPLTSMAAHAVDE+VDIELE+N++VN
Subjt:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN

Query:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA
        ETR N+KE + GSLPF PPPPPPIRE NHS+YE EDQNVDV  LD+ER+ LD+A
Subjt:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA

XP_022988786.1 zinc finger CCCH domain-containing protein 40-like isoform X1 [Cucurbita maxima]

1.6e-188

80.18

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW
        M+VG KLFKTKLCVLYQKGRCSRPSCSFAHG+AELRRFA   GA++G              RREYRG+DLRHKLD+RHSPLQERDSRGRHGPR  YSSSW
Subjt:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW

Query:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER
        SLERQSDRKRRKKE+GDS NDYSG+LRISDRSEERDREGKI SS SRD LEGQLNKMQADIEMAEHHKHQAEVYL+E+IQEVDSLTSRIQELESQLYKER
Subjt:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER

Query:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ
        E+ +RIKSKIKKFVKAHNRY+RIQDELKR          QL SDV+KIGANEEDSSINIVSDGEDPG+HA SPL DLQKD S+SKKK HV+QDIAENSK+
Subjt:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ

Query:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN
        ADL KGSKEAV R +RFSRWNAHP+QS+YSKIE VGN++NDLIPTANESKQKRG+TS++V +ADK+RGLESGVVVPLTSMAAHAVDE+VDIELE+NN+VN
Subjt:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN

Query:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA
        ETR N+KE + GSLPF PPPPPPIRE NHSRYE EDQNVDV  LD+ER+ LD+A
Subjt:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA

XP_023530203.1 zinc finger CCCH domain-containing protein 40-like isoform X4 [Cucurbita pepo subsp. pepo]

5.2e-184

79.3

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW
        M+VG KLFKTKLCVLYQKGRCSRPSCSFAHG+AELRRFA   GA++G              RREYRG+DLRHKLD+RHSPLQERDSRGRHGPR  YSSSW
Subjt:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW

Query:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER
        SLERQSDRKRRKKE+GDS NDYSG+LRISDRSEERDREGKI SS SRD LEGQLNKMQADIEMAEHHKHQAEVYL+E+IQEVDSLTSRIQELESQLYKER
Subjt:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER

Query:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ
        E+ +RIKSKIKKFVKAHNRY+RIQDELKR          QL SDV+KIGANEEDSSINIVSDGEDPG+HA SPL DLQKD S+SKKK H++QDIAENSK+
Subjt:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ

Query:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN
        ADL KGSKEAV R +RFSRWNAHP+QS+YSKIE VGN++N LIPTAN+SKQKRG+TS++V +ADK+RGLESG VVPLTSMAAHAVDE+VDIEL+VNN+VN
Subjt:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN

Query:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA
        ETR N+KE + GSLPF PPPPPPIRE NHSRYE EDQNVDV  LD+ER+ LD+A
Subjt:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA

XP_038887776.1 zinc finger CCCH domain-containing protein 40 isoform X1 [Benincasa hispida]

7.8e-180

76.04

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW
        MMVGRKLFKTKLCVLYQKG CSRPSCSFAHG+AELRRFAG                     R++YRG+DLR KLD+RHSPLQERDSRGRH PR +YSSSW
Subjt:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW

Query:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER
        S+ER SDRKRRKKEHGDSH+DYSG+LRISDR+EE+DR+GKI SS SRD LEGQLNKMQ+DI+MAEHHKHQAEVYL+EKIQEVD LTSRIQELESQLYKER
Subjt:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER

Query:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ
        +EC+RIKSKIKKFVKAHNR++R+QDELKR          QL  DV+KIGANEEDSSINIVSDGEDP YHA+ P  DLQKD S+SK+KMH +QD AENSK+
Subjt:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ

Query:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN
        ADL KG+KEAV R  R SRWNAHPA+S+YSKIE VGN+INDLIPTANES+QKRGKTSSSV  ADK+RGLESGVVVPLTSMAAHAVDE+VDI+LE++NEV 
Subjt:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN

Query:  ETRGNSKEVASGSLPFL-PPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA
        E R ++KE ASGSLPFL PPPPPPI E NHSRYE EDQNVDVEV+D+E   +DDA
Subjt:  ETRGNSKEVASGSLPFL-PPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C4D9 zinc finger CCCH domain-containing protein 13

7.8e-226

93.83

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW
        MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNG              RREYRGSDLRHKLDNRHSPLQERDSRGRHGPR +YSSSW
Subjt:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW

Query:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER
        SLERQSDRKRRKKEHGDSHNDYSGSLRISDRS+ERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER
Subjt:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER

Query:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ
        EECKRIKSKIKKFVKAHNRYTRIQDELKR          QLASDVSKIGANEEDSSINIVSDGEDPGYHAASP RDLQKDASSSKKKMHVIQDIAENSKQ
Subjt:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ

Query:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN
        ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN
Subjt:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN

Query:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA
        ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA
Subjt:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA

A0A6J1ESE6 zinc finger CCCH domain-containing protein 40-like isoform X2

7.8e-186

79.3

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW
        M+VG KLFKTKLCVLYQKGRCSRPSCSFAHG+AELRRFA   GA++G              RREYRG+DLRHKLD+RHSPLQERDSRGRHGPR  YSSSW
Subjt:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW

Query:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER
        SLERQSDRKRRKKE+GDS NDYSG+LRISDRSEERDREGKI SS SRD LEGQLNKMQADIEMAEHHKHQAEVYL+E+IQEVDSLTSRIQELESQLYKER
Subjt:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER

Query:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ
        E+ +RIKSKIKKFVKAHNRY+RIQDELKR          QL SDV+KIGANEEDSSINIVSDGEDPG+HA SPL DLQKD S+SKKK H++QDIA NSK+
Subjt:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ

Query:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN
        ADL KGSKEAV R +RFSRWNAHP+QS+YSKIE VGN++NDLIPTANESKQKRG+TS++V +ADK+RGLESGVVVPLTSMAAHAVDE+VDIELE+N++VN
Subjt:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN

Query:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA
        ETR N+KE + GSLPF PPPPPPIRE NHS+YE EDQNVDV  LD+ER+ LD+A
Subjt:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA

A0A6J1GKR3 zinc finger CCCH domain-containing protein 13-like isoform X1

7.9e-178

75.33

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW
        MM+GRKLFKTKLCVLYQKG CSRPSCSFAHG+AELRRFAG                     R+EYR +DLRHKLDNRHSPLQERDSRGRHGPR +YSSSW
Subjt:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW

Query:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER
        SLER SD KRRKK+HGDS  DY+G+LRI+DRSEERDREGKI SS+SRD LEGQLNKMQADIEMAEHH+HQAEVYL+EKIQEVDSLTSRIQELESQLY ER
Subjt:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER

Query:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ
        EEC+RIKSKIKKFVKAHNRY+ IQDELKR          QL SDV+KIGANEEDSS+NIVSDGEDPGYHAA PL  L KD S+SK+K+HV QDIA NSK+
Subjt:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ

Query:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN
        ADL KGSKEAV R +R SRWNAHPA+S+YSKIE V N+ ND IP ANES+QKRGK S+SV TADK+R L++GVVVPLTSMAAHAV+E+VDIELEVNNEV+
Subjt:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN

Query:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA
        + R ++KE ASGS P LPPP  PI E NHSRYEGEDQN+DVEV+D+E + LDDA
Subjt:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA

A0A6J1GKX5 zinc finger CCCH domain-containing protein 40-like isoform X2

3.0e-177

75.11

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW
        MM+GRKLFKTKLCVLYQKG CSRPSCSFAHG+AELRRFAG                     R+EYR +DLRHKLDNRHSPLQERDSRGRHGP  +YSSSW
Subjt:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW

Query:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER
        SLER SD KRRKK+HGDS  DY+G+LRI+DRSEERDREGKI SS+SRD LEGQLNKMQADIEMAEHH+HQAEVYL+EKIQEVDSLTSRIQELESQLY ER
Subjt:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER

Query:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ
        EEC+RIKSKIKKFVKAHNRY+ IQDELKR          QL SDV+KIGANEEDSS+NIVSDGEDPGYHAA PL  L KD S+SK+K+HV QDIA NSK+
Subjt:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ

Query:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN
        ADL KGSKEAV R +R SRWNAHPA+S+YSKIE V N+ ND IP ANES+QKRGK S+SV TADK+R L++GVVVPLTSMAAHAV+E+VDIELEVNNEV+
Subjt:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN

Query:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA
        + R ++KE ASGS P LPPP  PI E NHSRYEGEDQN+DVEV+D+E + LDDA
Subjt:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA

A0A6J1JI85 zinc finger CCCH domain-containing protein 40-like isoform X1

7.6e-189

80.18

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Query:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW
        M+VG KLFKTKLCVLYQKGRCSRPSCSFAHG+AELRRFA   GA++G              RREYRG+DLRHKLD+RHSPLQERDSRGRHGPR  YSSSW
Subjt:  MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSW

Query:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER
        SLERQSDRKRRKKE+GDS NDYSG+LRISDRSEERDREGKI SS SRD LEGQLNKMQADIEMAEHHKHQAEVYL+E+IQEVDSLTSRIQELESQLYKER
Subjt:  SLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKER

Query:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ
        E+ +RIKSKIKKFVKAHNRY+RIQDELKR          QL SDV+KIGANEEDSSINIVSDGEDPG+HA SPL DLQKD S+SKKK HV+QDIAENSK+
Subjt:  EECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQ

Query:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN
        ADL KGSKEAV R +RFSRWNAHP+QS+YSKIE VGN++NDLIPTANESKQKRG+TS++V +ADK+RGLESGVVVPLTSMAAHAVDE+VDIELE+NN+VN
Subjt:  ADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVN

Query:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA
        ETR N+KE + GSLPF PPPPPPIRE NHSRYE EDQNVDV  LD+ER+ LD+A
Subjt:  ETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA

SwissProt top hits

e value

%identity

Alignment

Q6H7U2 Zinc finger CCCH domain-containing protein 13

2.9e-44

34.07

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Query:  FKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQE----RDSRG-------RHGPRGKY
        +KTKLC L+Q+G C+R +CSFAHG  ++RR     GA           FT    RR+YR  D R ++D R SP +     R+SRG       R   R + 
Subjt:  FKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQE----RDSRG-------RHGPRGKY

Query:  SS-SWSLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQ
        SS S S  R+S+R+  KK   D   + S SL +SD ++E+ ++ K +S   ++  E QL +++ D+E     K Q EV L+EKI EV  ++S++ +LE Q
Subjt:  SS-SWSLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQ

Query:  LYKEREECKRIKSKIKKFVKAHNRYTRIQDELKRQ----------LASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDL----QKDASSSKKKMHVI
        L +E++EC R+ SK+KKF+KAH R+ + Q+E+KR           LASD+ K GANEE SS+N   +   P   AA+  R +     ++A + KK+    
Subjt:  LYKEREECKRIKSKIKKFVKAHNRYTRIQDELKRQ----------LASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDL----QKDASSSKKKMHVI

Query:  QDIAENSKQADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDE-DVD
         D    S +       +  V+ F + S+      +SLY K +                + ++ K  +++ T +K++G     V+P T MAAHA+D+ +  
Subjt:  QDIAENSKQADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKINDLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDE-DVD

Query:  IELEVNNEVNETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVE
        IELE  +E  +    +        P +P  PPP+ +N + +YEG+D+ VDVE
Subjt:  IELEVNNEVNETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVE

Q93XW7 Zinc finger CCCH domain-containing protein 40

4.0e-46

35.04

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Query:  MVGRKLFKTKLCVLYQK-GRCSRPSCSFAHGSAELRRFAGGGGAYNG---NLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPR----
        M G  ++KTKLC+L+ K G CSRP+C+FAHG+AELRR   G  ++ G   N+   LR       RR    SDLR +L  + SP + R S  R G R    
Subjt:  MVGRKLFKTKLCVLYQK-GRCSRPSCSFAHGSAELRRFAGGGGAYNG---NLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPR----

Query:  GKYSSSWSLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELE
          + +S   E + D+  R+    D   DY+G L++ +R E+R  +G+       ++LE QL  ++ D++M    K + E  +E K  EVD LTSRIQELE
Subjt:  GKYSSSWSLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELE

Query:  SQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYH---AASPLRDLQKDASSSKKKMHV
        +QL +E++EC+RI S  KKFVK +NR+ R QD+LKR          QL++ ++    N  D  ++IVSD E  G +   A  P  +LQ  +S S+KK +V
Subjt:  SQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYH---AASPLRDLQKDASSSKKKMHV

Query:  IQDIAENSKQADLI-KGSKEAV-SRFKRFSRWNAHPAQSLYSKIETVGNKINDLI--PTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVD
         Q   +   +  LI +G +E V +  KR   WN   ++S YS+ E+      D I   ++ E   KR + S      DK        V+  TSMAA   D
Subjt:  IQDIAENSKQADLI-KGSKEAV-SRFKRFSRWNAHPAQSLYSKIETVGNKINDLI--PTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVD

Query:  EDVDIELEVNNEVNETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA
                   +V E+   + E A+GS     PPPPP R+ +  R   ++ +V+ +V+++++++ DD+
Subjt:  EDVDIELEVNNEVNETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA

Arabidopsis top hits

e value

%identity

Alignment

AT3G21810.1 Zinc finger C-x8-C-x5-C-x3-H type family protein

2.9e-47

35.04

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Query:  MVGRKLFKTKLCVLYQK-GRCSRPSCSFAHGSAELRRFAGGGGAYNG---NLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPR----
        M G  ++KTKLC+L+ K G CSRP+C+FAHG+AELRR   G  ++ G   N+   LR       RR    SDLR +L  + SP + R S  R G R    
Subjt:  MVGRKLFKTKLCVLYQK-GRCSRPSCSFAHGSAELRRFAGGGGAYNG---NLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPR----

Query:  GKYSSSWSLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELE
          + +S   E + D+  R+    D   DY+G L++ +R E+R  +G+       ++LE QL  ++ D++M    K + E  +E K  EVD LTSRIQELE
Subjt:  GKYSSSWSLERQSDRKRRKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELE

Query:  SQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYH---AASPLRDLQKDASSSKKKMHV
        +QL +E++EC+RI S  KKFVK +NR+ R QD+LKR          QL++ ++    N  D  ++IVSD E  G +   A  P  +LQ  +S S+KK +V
Subjt:  SQLYKEREECKRIKSKIKKFVKAHNRYTRIQDELKR----------QLASDVSKIGANEEDSSINIVSDGEDPGYH---AASPLRDLQKDASSSKKKMHV

Query:  IQDIAENSKQADLI-KGSKEAV-SRFKRFSRWNAHPAQSLYSKIETVGNKINDLI--PTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVD
         Q   +   +  LI +G +E V +  KR   WN   ++S YS+ E+      D I   ++ E   KR + S      DK        V+  TSMAA   D
Subjt:  IQDIAENSKQADLI-KGSKEAV-SRFKRFSRWNAHPAQSLYSKIETVGNKINDLI--PTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVD

Query:  EDVDIELEVNNEVNETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA
                   +V E+   + E A+GS     PPPPP R+ +  R   ++ +V+ +V+++++++ DD+
Subjt:  EDVDIELEVNNEVNETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSHLDDA

Sequences

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CDS sequence

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ATGATGGTCGGACGCAAACTTTTCAAGACCAAGTTATGCGTGCTTTATCAGAAAGGCCGCTGTTCTCGCCCAAGTTGCTCGTTCGCTCACGGCAGCGCTGAACTCAGGCG
ATTTGCTGGTGGTGGTGGTGCCTACAACGGTAATTTGCCCTTGTATCTACGGTCTTTTACTATGTTCTTTAGTAGACGAGAATATAGAGGAAGTGATTTAAGGCATAAGC
TTGACAACAGGCATTCTCCCCTGCAGGAAAGGGATTCCAGGGGGCGACATGGACCTCGTGGTAAGTATAGCTCCTCCTGGTCACTTGAGCGACAAAGTGACCGTAAAAGA
AGGAAAAAGGAACATGGGGATTCCCATAATGATTATTCTGGGAGTTTGAGGATTTCAGATAGAAGTGAAGAACGAGATAGAGAAGGGAAAATCACATCATCTACTTCTAG
AGACATTCTTGAGGGGCAGTTAAACAAGATGCAGGCAGATATTGAGATGGCTGAGCACCACAAACACCAAGCTGAGGTCTACCTGGAAGAGAAGATCCAAGAAGTGGACA
GTTTGACTTCTAGAATTCAGGAACTGGAATCTCAATTATACAAAGAAAGGGAGGAGTGCAAAAGGATCAAATCAAAAATTAAGAAGTTTGTCAAAGCACATAATCGTTAC
ACGAGGATACAAGATGAACTGAAGCGGCAACTGGCCTCAGATGTTAGTAAAATTGGTGCCAACGAAGAAGACTCAAGTATCAATATTGTGAGCGATGGAGAGGACCCTGG
TTATCATGCAGCCAGCCCTCTTCGCGACCTGCAAAAAGATGCTTCTTCAAGCAAGAAGAAAATGCATGTTATTCAAGATATTGCCGAAAACTCAAAGCAAGCCGATTTAA
TCAAAGGAAGTAAGGAGGCAGTGAGCAGATTTAAAAGGTTCTCTCGGTGGAATGCGCATCCTGCTCAATCGTTATATAGCAAAATTGAGACGGTTGGCAACAAAATCAAT
GATTTGATACCTACAGCAAACGAAAGCAAGCAGAAGAGGGGAAAAACATCTAGCAGCGTTCTTACTGCAGATAAGATTAGGGGTCTAGAGTCAGGTGTTGTAGTGCCGTT
AACCAGCATGGCTGCTCATGCAGTTGATGAAGATGTTGATATCGAATTGGAAGTTAATAATGAAGTGAATGAAACAAGGGGAAATTCTAAGGAAGTTGCATCAGGCAGCC
TGCCGTTCCTGCCCCCTCCACCTCCTCCAATCCGTGAAAACAACCATTCAAGGTATGAGGGTGAAGATCAAAACGTAGATGTGGAGGTGCTCGATGAGGAAAGGTCGCAT
TTGGACGATGCT

mRNA sequence

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Protein sequence

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MMVGRKLFKTKLCVLYQKGRCSRPSCSFAHGSAELRRFAGGGGAYNGNLPLYLRSFTMFFSRREYRGSDLRHKLDNRHSPLQERDSRGRHGPRGKYSSSWSLERQSDRKR
RKKEHGDSHNDYSGSLRISDRSEERDREGKITSSTSRDILEGQLNKMQADIEMAEHHKHQAEVYLEEKIQEVDSLTSRIQELESQLYKEREECKRIKSKIKKFVKAHNRY
TRIQDELKRQLASDVSKIGANEEDSSINIVSDGEDPGYHAASPLRDLQKDASSSKKKMHVIQDIAENSKQADLIKGSKEAVSRFKRFSRWNAHPAQSLYSKIETVGNKIN
DLIPTANESKQKRGKTSSSVLTADKIRGLESGVVVPLTSMAAHAVDEDVDIELEVNNEVNETRGNSKEVASGSLPFLPPPPPPIRENNHSRYEGEDQNVDVEVLDEERSH
LDDA

MS022400 (gene) of Bitter gourd (TR) v1 genome