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MS022443 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022443
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationscaffold47:3389581..3389748
RNA-Seq ExpressionMS022443
SyntenyMS022443
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0010375 - stomatal complex patterning (biological process)
GO:2000122 - negative regulation of stomatal complex development (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7014027.1 unnamed protein product [Microthlaspi erraticum]6.4e-2389.29Show/hide
Query:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        TV VAGSRLPDCSHACGSCSPCRLVM+SFVCA+++EAETCPMAY+CMCNNKSYPVP
Subjt:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
KAG7579926.1 hypothetical protein ISN45_Aa03g040260 [Arabidopsis thaliana x Arabidopsis arenosa]4.9e-2391.07Show/hide
Query:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        TV VAGSRLPDCSHACGSCSPCRLVM+SFVCA++QEAETCPMAY+CMCNNKSYPVP
Subjt:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
NP_179684.1 epidermal patterning factor 1 [Arabidopsis thaliana]4.9e-2391.07Show/hide
Query:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        TV VAGSRLPDCSHACGSCSPCRLVM+SFVCA+V+EAETCPMAY+CMCNNKSYPVP
Subjt:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
XP_002886313.1 protein EPIDERMAL PATTERNING FACTOR 1 [Arabidopsis lyrata subsp. lyrata]4.9e-2391.07Show/hide
Query:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        TV VAGSRLPDCSHACGSCSPCRLVM+SFVCA++QEAETCPMAY+CMCNNKSYPVP
Subjt:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
XP_022148033.1 protein EPIDERMAL PATTERNING FACTOR 1-like [Momordica charantia]9.0e-25100Show/hide
Query:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
Subjt:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
TrEMBL top hitse value%identityAlignment
A0A087HEB4 Epidermal patterning factor-like protein3.1e-2389.29Show/hide
Query:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        TV VAGSRLPDCSHACGSCSPCRLVM+SFVCA+++EAETCPMAY+CMCNNKSYPVP
Subjt:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
A0A178VX97 Epidermal patterning factor-like protein2.4e-2391.07Show/hide
Query:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        TV VAGSRLPDCSHACGSCSPCRLVM+SFVCA+V+EAETCPMAY+CMCNNKSYPVP
Subjt:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
A0A6D2HH05 Epidermal patterning factor-like protein3.1e-2389.29Show/hide
Query:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        TV VAGSRLPDCSHACGSCSPCRLVM+SFVCA+++EAETCPMAY+CMCNNKSYPVP
Subjt:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
A0A6J1D2Y3 Epidermal patterning factor-like protein4.4e-25100Show/hide
Query:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
Subjt:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
D7L4L8 Epidermal patterning factor-like protein2.4e-2391.07Show/hide
Query:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        TV VAGSRLPDCSHACGSCSPCRLVM+SFVCA++QEAETCPMAY+CMCNNKSYPVP
Subjt:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
SwissProt top hitse value%identityAlignment
C4B8C5 EPIDERMAL PATTERNING FACTOR-like protein 74.5e-1153.85Show/hide
Query:  AGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        +GS +PDCS+ACG C PC+LV+IS  C+A   +E CP+ Y+C+C  K Y VP
Subjt:  AGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
Q8LC53 Protein EPIDERMAL PATTERNING FACTOR 25.9e-1158.82Show/hide
Query:  GSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        GS LPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C  + Y VP
Subjt:  GSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
Q8S8I4 Protein EPIDERMAL PATTERNING FACTOR 16.5e-2691.07Show/hide
Query:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        TV VAGSRLPDCSHACGSCSPCRLVM+SFVCA+V+EAETCPMAY+CMCNNKSYPVP
Subjt:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
Arabidopsis top hitse value%identityAlignment
AT1G34245.1 Putative membrane lipoprotein4.2e-1258.82Show/hide
Query:  GSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        GS LPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C  + Y VP
Subjt:  GSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
AT1G71866.1 LOCATED IN: endomembrane system3.2e-1253.85Show/hide
Query:  AGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        +GS +PDCS+ACG C PC+LV+IS  C+A   +E CP+ Y+C+C  K Y VP
Subjt:  AGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
AT2G20875.1 epidermal patterning factor 14.6e-2791.07Show/hide
Query:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP
        TV VAGSRLPDCSHACGSCSPCRLVM+SFVCA+V+EAETCPMAY+CMCNNKSYPVP
Subjt:  TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGGTTGCAGTGGCGGGGTCGAGATTGCCGGATTGCTCCCACGCGTGCGGCTCGTGCTCGCCGTGCAGGCTTGTGATGATCAGTTTCGTTTGTGCGGCGGTGCAAGAGGC
GGAGACATGTCCCATGGCTTACAGATGCATGTGTAATAACAAGTCATATCCTGTTCCT
mRNA sequenceShow/hide mRNA sequence
ACGGTTGCAGTGGCGGGGTCGAGATTGCCGGATTGCTCCCACGCGTGCGGCTCGTGCTCGCCGTGCAGGCTTGTGATGATCAGTTTCGTTTGTGCGGCGGTGCAAGAGGC
GGAGACATGTCCCATGGCTTACAGATGCATGTGTAATAACAAGTCATATCCTGTTCCT
Protein sequenceShow/hide protein sequence
TVAVAGSRLPDCSHACGSCSPCRLVMISFVCAAVQEAETCPMAYRCMCNNKSYPVP