; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022461 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022461
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionE3 ubiquitin-protein ligase RNF12-like isoform X1
Genome locationscaffold47:3580296..3581887
RNA-Seq ExpressionMS022461
SyntenyMS022461
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07001.1 E3 ubiquitin-protein ligase RNF12 isoform X1 [Cucumis melo var. makuwa]6.0e-10876.63Show/hide
Query:  MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY
        MSRRSTNFPPGIWQARREY RQR+N N S+ VNSTP H+ SFQNSY E DP PWRPAGE M  RILDIGS PEE P IVRIITHSRP Q+E+SP PAELY
Subjt:  MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY

Query:  TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRE----NYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSN
        +PTPRS+GNSTLTSEEQNMALNKLKKK+YDPP N  +RINFYYRE    NY ER N  SDE+GK C+VCLEDFQP+EEVMTTPCNHMFHE+CIVPWVKSN
Subjt:  TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRE----NYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSN

Query:  GQCPVCRFALFE-RTGRRAASSN-NATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFW
        GQCPVCRF LFE RT RR ASSN N + S    ++L DDE++YLIRAMEEALMLRN+A FW
Subjt:  GQCPVCRFALFE-RTGRRAASSN-NATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFW

XP_008455285.1 PREDICTED: E3 ubiquitin-protein ligase RNF12 isoform X1 [Cucumis melo]5.4e-10976.81Show/hide
Query:  MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY
        MSRRSTNFPPGIWQARREY RQR+N N S+ VNSTP H+ SFQNSY E DP PWRPAGE M  RILDIGS PEE P IVRIITHSRP Q+E+SP PAELY
Subjt:  MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY

Query:  TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRE----NYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSN
        +PTPRS+GNSTLTSEEQNMALNKLKKK+YDPP N  +RINFYYRE    NY ER N  SDE+GK C+VCLEDFQP+EEVMTTPCNHMFHE+CIVPWVKSN
Subjt:  TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRE----NYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSN

Query:  GQCPVCRFALFE-RTGRRAASSN-NATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFWGA
        GQCPVCRF LFE RT RR ASSN N   S    ++L DDE++YLIRAMEEALMLRN+A FWGA
Subjt:  GQCPVCRFALFE-RTGRRAASSN-NATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFWGA

XP_022147817.1 E3 ubiquitin-protein ligase RNF12-like isoform X1 [Momordica charantia]3.5e-148100Show/hide
Query:  MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY
        MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY
Subjt:  MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY

Query:  TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRENYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCP
        TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRENYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCP
Subjt:  TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRENYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCP

Query:  VCRFALFERTGRRAASSNNATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFWGA
        VCRFALFERTGRRAASSNNATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFWGA
Subjt:  VCRFALFERTGRRAASSNNATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFWGA

XP_022147818.1 E3 ubiquitin-protein ligase RNF12-B-like isoform X2 [Momordica charantia]2.1e-121100Show/hide
Query:  QNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELYTPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFY
        QNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELYTPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFY
Subjt:  QNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELYTPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFY

Query:  YRENYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNATASNVLTNNLPDDEIVYLIRAM
        YRENYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNATASNVLTNNLPDDEIVYLIRAM
Subjt:  YRENYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNATASNVLTNNLPDDEIVYLIRAM

Query:  EEALMLRNLAGFWGA
        EEALMLRNLAGFWGA
Subjt:  EEALMLRNLAGFWGA

XP_038888228.1 uncharacterized protein LOC120078088 isoform X1 [Benincasa hispida]2.2e-11076.72Show/hide
Query:  MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY
        MSRRSTNFPPGIWQARREY RQR+N N S+ +NSTP H++SFQNSY E DP PWRPAGE M ARILDIG P EE P IVRIIT SRP QLE+SP PAELY
Subjt:  MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY

Query:  TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRE----NYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSN
        +PTPRS+GNSTLTSEEQNMAL KLKK +YDPP N  +RI+FYYRE    NY ER+N  SDE+GKRC+VCLEDFQP+EEVMTTPCNHMFHEECIVPWVKSN
Subjt:  TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRE----NYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSN

Query:  GQCPVCRFALFERTGRRAASSN-NATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFWGA
        GQCPVCRF LFERT RR ASSN N T S    ++L DD+++YLIRAME+ALMLRNLAGFWGA
Subjt:  GQCPVCRFALFERTGRRAASSN-NATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFWGA

TrEMBL top hitse value%identityAlignment
A0A1S3C054 E3 ubiquitin-protein ligase RNF12 isoform X12.6e-10976.81Show/hide
Query:  MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY
        MSRRSTNFPPGIWQARREY RQR+N N S+ VNSTP H+ SFQNSY E DP PWRPAGE M  RILDIGS PEE P IVRIITHSRP Q+E+SP PAELY
Subjt:  MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY

Query:  TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRE----NYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSN
        +PTPRS+GNSTLTSEEQNMALNKLKKK+YDPP N  +RINFYYRE    NY ER N  SDE+GK C+VCLEDFQP+EEVMTTPCNHMFHE+CIVPWVKSN
Subjt:  TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRE----NYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSN

Query:  GQCPVCRFALFE-RTGRRAASSN-NATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFWGA
        GQCPVCRF LFE RT RR ASSN N   S    ++L DDE++YLIRAMEEALMLRN+A FWGA
Subjt:  GQCPVCRFALFE-RTGRRAASSN-NATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFWGA

A0A5A7SLQ9 E3 ubiquitin-protein ligase RNF12 isoform X12.5e-10776.25Show/hide
Query:  MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY
        MSRRSTNFPPGIWQARREY RQR+N N S+ VNSTP H+ SFQNSY E DP PWRPAGE M  RILDIGS PEE P IVRIITHSRP Q+E+SP PAELY
Subjt:  MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY

Query:  TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRE----NYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSN
        +PTPRS+GNSTLTSEEQNMALNKLKKK+YDPP N  +RINFYYRE    NY ER N  SDE+GK C+VCLEDFQ +EEVMTTPCNHMFHE+CIVPWVKSN
Subjt:  TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRE----NYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSN

Query:  GQCPVCRFALFE-RTGRRAASSN-NATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFW
        GQCPVCRF LFE RT RR ASSN N + S    ++L DDE++YLIRAMEEALMLRN+A FW
Subjt:  GQCPVCRFALFE-RTGRRAASSN-NATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFW

A0A5D3C526 E3 ubiquitin-protein ligase RNF12 isoform X12.9e-10876.63Show/hide
Query:  MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY
        MSRRSTNFPPGIWQARREY RQR+N N S+ VNSTP H+ SFQNSY E DP PWRPAGE M  RILDIGS PEE P IVRIITHSRP Q+E+SP PAELY
Subjt:  MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY

Query:  TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRE----NYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSN
        +PTPRS+GNSTLTSEEQNMALNKLKKK+YDPP N  +RINFYYRE    NY ER N  SDE+GK C+VCLEDFQP+EEVMTTPCNHMFHE+CIVPWVKSN
Subjt:  TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRE----NYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSN

Query:  GQCPVCRFALFE-RTGRRAASSN-NATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFW
        GQCPVCRF LFE RT RR ASSN N + S    ++L DDE++YLIRAMEEALMLRN+A FW
Subjt:  GQCPVCRFALFE-RTGRRAASSN-NATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFW

A0A6J1D2C6 E3 ubiquitin-protein ligase RNF12-B-like isoform X21.0e-121100Show/hide
Query:  QNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELYTPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFY
        QNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELYTPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFY
Subjt:  QNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELYTPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFY

Query:  YRENYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNATASNVLTNNLPDDEIVYLIRAM
        YRENYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNATASNVLTNNLPDDEIVYLIRAM
Subjt:  YRENYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNATASNVLTNNLPDDEIVYLIRAM

Query:  EEALMLRNLAGFWGA
        EEALMLRNLAGFWGA
Subjt:  EEALMLRNLAGFWGA

A0A6J1D3E4 E3 ubiquitin-protein ligase RNF12-like isoform X11.7e-148100Show/hide
Query:  MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY
        MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY
Subjt:  MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELY

Query:  TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRENYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCP
        TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRENYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCP
Subjt:  TPTPRSQGNSTLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRENYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCP

Query:  VCRFALFERTGRRAASSNNATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFWGA
        VCRFALFERTGRRAASSNNATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFWGA
Subjt:  VCRFALFERTGRRAASSNNATASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFWGA

SwissProt top hitse value%identityAlignment
Q6IRP0 E3 ubiquitin-protein ligase RNF126-B2.7e-1035.63Show/hide
Query:  GKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFAL----------------FERTGRRAASSNNATASNVLTNN
        G  C VC ED+   E V   PCNH+FH +CI+PW++ +  CPVCR +L                F  +   ++SS + T  N   NN
Subjt:  GKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFAL----------------FERTGRRAASSNNATASNVLTNN

Q91YL2 E3 ubiquitin-protein ligase RNF1261.6e-1047.46Show/hide
Query:  GKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASS
        G  C VC ED+   E V   PCNH+FH+ CIVPW++ +  CPVCR +L   TG+  A++
Subjt:  GKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASS

Q940T5 E3 ubiquitin-protein ligase RDUF29.3e-1140Show/hide
Query:  CSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNATASNVLTNNLP
        C+VC E F+   E    PC H+FH++CIVPW+     CPVCRF L     RR+ ++    A  +    LP
Subjt:  CSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNATASNVLTNNLP

Q9D0C1 E3 ubiquitin-protein ligase RNF1151.7e-1243.42Show/hide
Query:  ESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNATASNVLTNN
        E    G  C VC ED+   E+V   PCNH FH  CIVPW++ +  CPVCR +L      R   S+ A+ASN  +N+
Subjt:  ESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNATASNVLTNN

Q9Y4L5 E3 ubiquitin-protein ligase RNF1155.8e-1344.74Show/hide
Query:  ESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNATASNVLTNN
        E  + G  C VC ED+   EEV   PCNH FH  CIVPW++ +  CPVCR +L      R + S  A+ASN  +N+
Subjt:  ESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNATASNVLTNN

Arabidopsis top hitse value%identityAlignment
AT2G44330.1 RING/U-box superfamily protein1.5e-1142.86Show/hide
Query:  SNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFAL
        S+  SD+    C++C EDF   E     PCNH++H +CI+PW+ S+  CP+CR  L
Subjt:  SNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFAL

AT3G58720.1 RING/U-box superfamily protein2.4e-3039.06Show/hide
Query:  PPEET--PTIVRIITHSRPGQLESSPRPAELYTPTPRSQGNSTLTSEEQNMALNKLKKKIYDP-PKN-LGKRINFYYR------ENYKERSNGESDEDGK
        PP  T     +R   + R   LE+  +     +  P S   S+  + E++  L  L K+ Y+P PK+ L + ++ YYR      E+ +   N   +ED K
Subjt:  PPEET--PTIVRIITHSRPGQLESSPRPAELYTPTPRSQGNSTLTSEEQNMALNKLKKKIYDP-PKN-LGKRINFYYR------ENYKERSNGESDEDGK

Query:  RCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNAT--ASNVLTNNLPDDEIVYLIRAMEEALMLRN
        RCSVCLEDF+P+E VM TPC HMFHEECIVPW+K+ GQCPVCRF + + T + ++   N +    ++ TN+L   E++ ++RAMEE  +  N
Subjt:  RCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNAT--ASNVLTNNLPDDEIVYLIRAMEEALMLRN

AT3G58720.2 RING/U-box superfamily protein1.1e-3035.87Show/hide
Query:  SHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTI-VRIITHSRPGQLESSPRPAELYTPTPRSQGNSTLTSEEQNMALNKLKKKIYDP-PKN-L
        S+S  N ++  DP           +  +D+  P      I +R   + R   LE+  +     +  P S   S+  + E++  L  L K+ Y+P PK+ L
Subjt:  SHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTI-VRIITHSRPGQLESSPRPAELYTPTPRSQGNSTLTSEEQNMALNKLKKKIYDP-PKN-L

Query:  GKRINFYYR------ENYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNAT--ASNVLT
         + ++ YYR      E+ +   N   +ED KRCSVCLEDF+P+E VM TPC HMFHEECIVPW+K+ GQCPVCRF + + T + ++   N +    ++ T
Subjt:  GKRINFYYR------ENYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNAT--ASNVLT

Query:  NNLPDDEIVYLIRAMEEALMLRN
        N+L   E++ ++RAMEE  +  N
Subjt:  NNLPDDEIVYLIRAMEEALMLRN

AT5G56340.1 RING/U-box superfamily protein1.9e-1154.35Show/hide
Query:  RCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFAL
        +CSVCL+DF+   E    PC H FH  CIVPW++ +  CPVCRF L
Subjt:  RCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFAL

AT5G59550.1 zinc finger (C3HC4-type RING finger) family protein6.6e-1240Show/hide
Query:  CSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNATASNVLTNNLP
        C+VC E F+   E    PC H+FH++CIVPW+     CPVCRF L     RR+ ++    A  +    LP
Subjt:  CSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNATASNVLTNNLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGACGCTCTACTAATTTTCCTCCAGGAATTTGGCAGGCTAGAAGGGAGTATGGCCGCCAGAGACATAACATAAATTATTCAGACCATGTGAACTCCACGCCGCC
ACACTCCCATTCATTTCAGAATTCTTATATAGAGAGAGATCCATTTCCATGGCGGCCTGCAGGGGAGGCAATGTTTGCAAGAATATTGGACATTGGAAGCCCTCCGGAAG
AAACACCTACCATTGTCAGAATCATTACCCACTCCAGACCGGGACAGCTCGAATCCAGTCCAAGACCTGCGGAACTGTACACGCCAACTCCAAGATCCCAAGGGAACTCG
ACGCTAACATCTGAAGAGCAAAATATGGCACTGAATAAGCTCAAGAAAAAGATCTATGATCCTCCGAAGAACCTAGGTAAGAGAATTAACTTCTACTACAGAGAAAATTA
CAAGGAGAGGAGCAACGGGGAGAGCGATGAAGACGGCAAGAGATGCTCCGTTTGCCTTGAAGATTTCCAGCCGAGAGAGGAGGTGATGACGACGCCCTGCAACCATATGT
TCCACGAAGAATGCATCGTGCCGTGGGTGAAGAGCAATGGCCAATGTCCGGTCTGCAGATTCGCTTTGTTCGAGCGAACAGGGCGAAGGGCGGCTTCATCCAACAACGCT
ACTGCATCAAATGTTCTGACCAATAATCTACCCGACGATGAGATCGTGTACTTAATACGAGCCATGGAAGAAGCTCTGATGCTGCGAAATCTCGCCGGATTTTGGGGAGC
A
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGACGCTCTACTAATTTTCCTCCAGGAATTTGGCAGGCTAGAAGGGAGTATGGCCGCCAGAGACATAACATAAATTATTCAGACCATGTGAACTCCACGCCGCC
ACACTCCCATTCATTTCAGAATTCTTATATAGAGAGAGATCCATTTCCATGGCGGCCTGCAGGGGAGGCAATGTTTGCAAGAATATTGGACATTGGAAGCCCTCCGGAAG
AAACACCTACCATTGTCAGAATCATTACCCACTCCAGACCGGGACAGCTCGAATCCAGTCCAAGACCTGCGGAACTGTACACGCCAACTCCAAGATCCCAAGGGAACTCG
ACGCTAACATCTGAAGAGCAAAATATGGCACTGAATAAGCTCAAGAAAAAGATCTATGATCCTCCGAAGAACCTAGGTAAGAGAATTAACTTCTACTACAGAGAAAATTA
CAAGGAGAGGAGCAACGGGGAGAGCGATGAAGACGGCAAGAGATGCTCCGTTTGCCTTGAAGATTTCCAGCCGAGAGAGGAGGTGATGACGACGCCCTGCAACCATATGT
TCCACGAAGAATGCATCGTGCCGTGGGTGAAGAGCAATGGCCAATGTCCGGTCTGCAGATTCGCTTTGTTCGAGCGAACAGGGCGAAGGGCGGCTTCATCCAACAACGCT
ACTGCATCAAATGTTCTGACCAATAATCTACCCGACGATGAGATCGTGTACTTAATACGAGCCATGGAAGAAGCTCTGATGCTGCGAAATCTCGCCGGATTTTGGGGAGC
A
Protein sequenceShow/hide protein sequence
MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEAMFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELYTPTPRSQGNS
TLTSEEQNMALNKLKKKIYDPPKNLGKRINFYYRENYKERSNGESDEDGKRCSVCLEDFQPREEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRRAASSNNA
TASNVLTNNLPDDEIVYLIRAMEEALMLRNLAGFWGA